RNA–Protein interactions for RNA: ENST00000366553.2

CHML-201, Transcript of CHM like, Rab escort protein 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CHML, Length 7,594 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHML-201ENST00000366553 TCOF1Q13428 1488 aaKnown RBP13.52□□□□□ -0.25
CHML-201ENST00000366553 OLFM4Q6UX06 510 aa13.51□□□□□ -0.25
CHML-201ENST00000366553 LARP6Q9BRS8 491 aaKnown RBP13.51□□□□□ -0.25
CHML-201ENST00000366553 SMC2O95347 1197 aa13.51□□□□□ -0.25
CHML-201ENST00000366553 C14orf93Q9H972 538 aaKnown RBP13.51□□□□□ -0.25
CHML-201ENST00000366553 SETD1BQ9UPS6 1966 aaKnown RBP13.51□□□□□ -0.25
CHML-201ENST00000366553 ABCC11Q96J66 1382 aa13.51□□□□□ -0.25
CHML-201ENST00000366553 GCC2Q8IWJ2 1684 aa13.51□□□□□ -0.25
CHML-201ENST00000366553 WASLO00401 505 aaPredicted RBP13.51□□□□□ -0.25
CHML-201ENST00000366553 UPF3BQ9BZI7 483 aaKnown RBP13.51□□□□□ -0.25
CHML-201ENST00000366553 PDRG1Q9NUG6 133 aa13.51□□□□□ -0.25
CHML-201ENST00000366553 CCDC158Q5M9N0 1113 aa13.51□□□□□ -0.25
CHML-201ENST00000366553 ANKRD20A12PQ8NF67 263 aa13.51□□□□□ -0.25
CHML-201ENST00000366553 SPINK5Q9NQ38 1064 aaPredicted RBP13.51□□□□□ -0.25
CHML-201ENST00000366553 TBC1D2BQ9UPU7 963 aa13.51□□□□□ -0.25
CHML-201ENST00000366553 CCDC85AQ96PX6 553 aaPredicted RBP13.5□□□□□ -0.25
CHML-201ENST00000366553 PCDHB15Q9Y5E8 787 aa13.5□□□□□ -0.25
CHML-201ENST00000366553 TRIM34Q9BYJ4 488 aa13.5□□□□□ -0.25
CHML-201ENST00000366553 SYCE3A1L190 88 aa13.5□□□□□ -0.25
CHML-201ENST00000366553 BLOC1S2Q6QNY1 142 aa13.5□□□□□ -0.25
CHML-201ENST00000366553 TNMDQ9H2S6 317 aa13.5□□□□□ -0.25
CHML-201ENST00000366553 TSHZ3Q63HK5 1081 aa13.5□□□□□ -0.25
CHML-201ENST00000366553 LRRFIP2Q9Y608 721 aaKnown RBP13.5□□□□□ -0.25
CHML-201ENST00000366553 SPG7Q9UQ90 795 aa13.49□□□□□ -0.25
CHML-201ENST00000366553 TBC1D9Q6ZT07 1266 aa13.49□□□□□ -0.25
CHML-201ENST00000366553 SAMD1Q6SPF0 538 aaPredicted RBP13.49□□□□□ -0.25
CHML-201ENST00000366553 CIZ1Q9ULV3 898 aaPredicted RBP13.49□□□□□ -0.25
CHML-201ENST00000366553 TTLL5Q6EMB2 1281 aa13.49□□□□□ -0.25
CHML-201ENST00000366553 MX1P20591 662 aa13.49□□□□□ -0.25
CHML-201ENST00000366553 ANKRD1Q15327 319 aa13.49□□□□□ -0.25
CHML-201ENST00000366553 ANKLE2Q86XL3 938 aa13.49□□□□□ -0.25
CHML-201ENST00000366553 PARD3Q8TEW0 1356 aa13.48□□□□□ -0.25
CHML-201ENST00000366553 AEBP1Q8IUX7 1158 aa13.48□□□□□ -0.25
CHML-201ENST00000366553 ME1P48163 572 aa13.48□□□□□ -0.25
CHML-201ENST00000366553 TAF7Q15545 349 aaPredicted RBP13.48□□□□□ -0.25
CHML-201ENST00000366553 CCDC57Q2TAC2 916 aa13.48□□□□□ -0.25
CHML-201ENST00000366553 TNNQ9UQP3 1299 aa13.48□□□□□ -0.25
CHML-201ENST00000366553 MBIPQ9NS73 344 aa13.48□□□□□ -0.25
CHML-201ENST00000366553 SSFA2P28290 1259 aa13.48□□□□□ -0.25
CHML-201ENST00000366553 KRT85P78386 507 aa13.48□□□□□ -0.25
CHML-201ENST00000366553 KIF1BPQ96EK5 621 aa13.47□□□□□ -0.25
CHML-201ENST00000366553 BOLA2Q9H3K6 86 aa13.47□□□□□ -0.25
CHML-201ENST00000366553 CCDC192P0DO97 292 aa13.47□□□□□ -0.25
CHML-201ENST00000366553 MPRIPQ6WCQ1 1025 aa13.47□□□□□ -0.25
CHML-201ENST00000366553 EIF4G3O43432 1585 aaKnown RBP13.47□□□□□ -0.25
CHML-201ENST00000366553 IPO7O95373 1038 aaKnown RBP13.47□□□□□ -0.25
CHML-201ENST00000366553 CCDC47Q96A33 483 aaKnown RBP13.47□□□□□ -0.25
CHML-201ENST00000366553 STK38Q15208 465 aa13.47□□□□□ -0.25
CHML-201ENST00000366553 CCDC83Q8IWF9 413 aa13.47□□□□□ -0.25
CHML-201ENST00000366553 ZNF396Q96N95 335 aaPredicted RBP13.47□□□□□ -0.25
CHML-201ENST00000366553 TNPO1Q92973 898 aaKnown RBP13.47□□□□□ -0.25
CHML-201ENST00000366553 DDX11Q96FC9 970 aa13.47□□□□□ -0.25
CHML-201ENST00000366553 CEBPAP49715 358 aaPredicted RBP13.46□□□□□ -0.25
CHML-201ENST00000366553 MEX3CQ5U5Q3 659 aaKnown RBP13.46□□□□□ -0.25
CHML-201ENST00000366553 CEP89Q96ST8 783 aa13.46□□□□□ -0.25
CHML-201ENST00000366553 SART3Q15020 963 aaKnown RBP13.46□□□□□ -0.25
CHML-201ENST00000366553 BRMS1Q9HCU9 246 aa13.46□□□□□ -0.25
CHML-201ENST00000366553 DHX29Q7Z478 1369 aaKnown RBP13.46□□□□□ -0.25
CHML-201ENST00000366553 XBP1P17861 261 aa13.46□□□□□ -0.26
CHML-201ENST00000366553 BRPF1P55201 1214 aaPredicted RBP13.46□□□□□ -0.26
CHML-201ENST00000366553 PZPP20742 1482 aa13.46□□□□□ -0.26
CHML-201ENST00000366553 MNS1Q8NEH6 495 aa13.46□□□□□ -0.26
CHML-201ENST00000366553 TBC1D32Q96NH3 1257 aa13.46□□□□□ -0.26
CHML-201ENST00000366553 AMOTL2Q9Y2J4 779 aa13.45□□□□□ -0.26
CHML-201ENST00000366553 CAMK4Q16566 473 aa13.45□□□□□ -0.26
CHML-201ENST00000366553 SPATA32Q96LK8 384 aa13.45□□□□□ -0.26
CHML-201ENST00000366553 TESK2Q96S53 571 aa13.45□□□□□ -0.26
CHML-201ENST00000366553 ESPNB1AK53 854 aa13.45□□□□□ -0.26
CHML-201ENST00000366553 CCDC70Q6NSX1 233 aa13.44□□□□□ -0.26
CHML-201ENST00000366553 PLEKHH1Q9ULM0 1364 aa13.44□□□□□ -0.26
CHML-201ENST00000366553 PTCD1O75127 700 aaKnown RBP13.44□□□□□ -0.26
CHML-201ENST00000366553 CCDC8Q9H0W5 538 aaPredicted RBP13.44□□□□□ -0.26
CHML-201ENST00000366553 NAP1L1P55209 391 aaKnown RBP13.44□□□□□ -0.26
CHML-201ENST00000366553 GPS2Q13227 327 aa13.44□□□□□ -0.26
CHML-201ENST00000366553 FERMT3Q86UX7 667 aa13.44□□□□□ -0.26
CHML-201ENST00000366553 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.44□□□□□ -0.26
CHML-201ENST00000366553 RAB11FIP3O75154 756 aa13.44□□□□□ -0.26
CHML-201ENST00000366553 MYD88Q99836 296 aa13.44□□□□□ -0.26
CHML-201ENST00000366553 NSD2O96028 1365 aa13.44□□□□□ -0.26
CHML-201ENST00000366553 PLCH2O75038 1416 aa13.44□□□□□ -0.26
CHML-201ENST00000366553 PRPF40BQ6NWY9 871 aaKnown RBP13.44□□□□□ -0.26
CHML-201ENST00000366553 TRAPPC8Q9Y2L5 1435 aa13.43□□□□□ -0.26
CHML-201ENST00000366553 PTPRCP08575 1304 aa13.43□□□□□ -0.26
CHML-201ENST00000366553 NUCB1Q02818 461 aa13.43□□□□□ -0.26
CHML-201ENST00000366553 CARD14Q9BXL6 1004 aa13.43□□□□□ -0.26
CHML-201ENST00000366553 DENND4BO75064 1496 aaPredicted RBP13.42□□□□□ -0.26
CHML-201ENST00000366553 GDPD2Q9HCC8 539 aa13.42□□□□□ -0.26
CHML-201ENST00000366553 TCEAL9Q9UHQ7 104 aa13.42□□□□□ -0.26
CHML-201ENST00000366553 FOXO3O43524 673 aa13.42□□□□□ -0.26
CHML-201ENST00000366553 GLRX3O76003 335 aaKnown RBP13.42□□□□□ -0.26
CHML-201ENST00000366553 C8orf34Q49A92 452 aa13.42□□□□□ -0.26
CHML-201ENST00000366553 RLBP1P12271 317 aa13.42□□□□□ -0.26
CHML-201ENST00000366553 FLIIQ13045 1269 aa13.42□□□□□ -0.26
CHML-201ENST00000366553 PRDM11Q9NQV5 511 aa13.42□□□□□ -0.26
CHML-201ENST00000366553 NUP133Q8WUM0 1156 aa13.41□□□□□ -0.26
CHML-201ENST00000366553 ZRANB1Q9UGI0 708 aa13.41□□□□□ -0.26
CHML-201ENST00000366553 MPHOSPH8Q99549 860 aa13.41□□□□□ -0.26
CHML-201ENST00000366553 ACEP12821 1306 aa13.41□□□□□ -0.26
CHML-201ENST00000366553 UQCRHLA0A096LP55 91 aa13.41□□□□□ -0.26
CHML-201ENST00000366553 CCDC69A6NI79 296 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms