RNA–Protein interactions for RNA: ENST00000366259.2

LINC00449-201, long intergenic non-protein coding RNA 449, humanhuman

TSL 2 BASIC

Gene LINC00449, Length 872 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00449-201ENST00000366259 MEGF6O75095 1541 aa17.43■□□□□ 0.38
LINC00449-201ENST00000366259 ZNF784Q8NCA9 323 aaPredicted RBP17.43■□□□□ 0.38
LINC00449-201ENST00000366259 ZCRB1Q8TBF4 217 aaKnown RBP17.43■□□□□ 0.38
LINC00449-201ENST00000366259 PNPLA7Q6ZV29 1317 aa17.43■□□□□ 0.38
LINC00449-201ENST00000366259 NSD2O96028 1365 aa17.42■□□□□ 0.38
LINC00449-201ENST00000366259 SLC27A3Q5K4L6 730 aa17.42■□□□□ 0.38
LINC00449-201ENST00000366259 NBPF6Q5VWK0 638 aa17.42■□□□□ 0.38
LINC00449-201ENST00000366259 USHBP1Q8N6Y0 703 aa17.42■□□□□ 0.38
LINC00449-201ENST00000366259 NBPF4Q96M43 638 aa17.42■□□□□ 0.38
LINC00449-201ENST00000366259 GGNBP2Q9H3C7 697 aa17.42■□□□□ 0.38
LINC00449-201ENST00000366259 ANKRD36BQ8N2N9 1353 aa17.41■□□□□ 0.38
LINC00449-201ENST00000366259 COL24A1Q17RW2 1714 aa17.41■□□□□ 0.38
LINC00449-201ENST00000366259 FYB1O15117 783 aa17.41■□□□□ 0.38
LINC00449-201ENST00000366259 TFCP2L1Q9NZI6 479 aa17.41■□□□□ 0.38
LINC00449-201ENST00000366259 KLHL34Q8N239 644 aa17.4■□□□□ 0.38
LINC00449-201ENST00000366259 MAP3K5Q99683 1374 aa17.39■□□□□ 0.37
LINC00449-201ENST00000366259 SLC16A10Q8TF71 515 aa17.38■□□□□ 0.37
LINC00449-201ENST00000366259 KIF20BQ96Q89 1820 aa17.37■□□□□ 0.37
LINC00449-201ENST00000366259 GPR162Q16538 588 aa17.37■□□□□ 0.37
LINC00449-201ENST00000366259 RTL1A6NKG5 1358 aa17.37■□□□□ 0.37
LINC00449-201ENST00000366259 SLC24A1O60721 1099 aa17.36■□□□□ 0.37
LINC00449-201ENST00000366259 POLD1P28340 1107 aa17.36■□□□□ 0.37
LINC00449-201ENST00000366259 TMF1P82094 1093 aa17.36■□□□□ 0.37
LINC00449-201ENST00000366259 CCNL1Q9UK58 526 aaPredicted RBP17.36■□□□□ 0.37
LINC00449-201ENST00000366259 HSP90AB2PQ58FF8 381 aa17.35■□□□□ 0.37
LINC00449-201ENST00000366259 PELP1Q8IZL8 1130 aaKnown RBP17.35■□□□□ 0.37
LINC00449-201ENST00000366259 USP47Q96K76 1375 aa17.35■□□□□ 0.37
LINC00449-201ENST00000366259 NLGN2Q8NFZ4 835 aa17.34■□□□□ 0.37
LINC00449-201ENST00000366259 RAPGEF4Q8WZA2 1011 aa17.34■□□□□ 0.37
LINC00449-201ENST00000366259 ITGB4P16144 1822 aa17.33■□□□□ 0.37
LINC00449-201ENST00000366259 TAF1LQ8IZX4 1826 aa17.33■□□□□ 0.37
LINC00449-201ENST00000366259 CEP350Q5VT06 3117 aa17.33■□□□□ 0.37
LINC00449-201ENST00000366259 MSH5O43196 834 aa17.33■□□□□ 0.36
LINC00449-201ENST00000366259 TATP17735 454 aaPredicted RBP17.33■□□□□ 0.36
LINC00449-201ENST00000366259 COL23A1Q86Y22 540 aaPredicted RBP17.33■□□□□ 0.36
LINC00449-201ENST00000366259 SMG6Q86US8 1419 aaKnown RBP17.32■□□□□ 0.36
LINC00449-201ENST00000366259 C5P01031 1676 aa17.32■□□□□ 0.36
LINC00449-201ENST00000366259 INSRP06213 1382 aa17.31■□□□□ 0.36
LINC00449-201ENST00000366259 CGNL1Q0VF96 1302 aa17.31■□□□□ 0.36
LINC00449-201ENST00000366259 CARD14Q9BXL6 1004 aa17.31■□□□□ 0.36
LINC00449-201ENST00000366259 MSL1Q68DK7 614 aa17.3■□□□□ 0.36
LINC00449-201ENST00000366259 EMILIN1Q9Y6C2 1016 aa17.3■□□□□ 0.36
LINC00449-201ENST00000366259 MAP2P11137 1827 aaKnown RBP17.3■□□□□ 0.36
LINC00449-201ENST00000366259 TOGARAM1Q9Y4F4 1720 aa17.3■□□□□ 0.36
LINC00449-201ENST00000366259 FLT4P35916 1363 aa17.29■□□□□ 0.36
LINC00449-201ENST00000366259 CYP27B1O15528 508 aa17.29■□□□□ 0.36
LINC00449-201ENST00000366259 MPRIPQ6WCQ1 1025 aa17.29■□□□□ 0.36
LINC00449-201ENST00000366259 PCDH11XQ9BZA7 1347 aa17.28■□□□□ 0.36
LINC00449-201ENST00000366259 PCDH11YQ9BZA8 1340 aa17.28■□□□□ 0.36
LINC00449-201ENST00000366259 YBX3P16989 372 aaKnown RBP eCLIP17.27■□□□□ 0.36
LINC00449-201ENST00000366259 PALLDQ8WX93 1383 aa17.27■□□□□ 0.35
LINC00449-201ENST00000366259 PPM1GO15355 546 aaPredicted RBP17.26■□□□□ 0.35
LINC00449-201ENST00000366259 C1QTNF8P60827 252 aa17.26■□□□□ 0.35
LINC00449-201ENST00000366259 SMIM5Q71RC9 77 aa17.26■□□□□ 0.35
LINC00449-201ENST00000366259 NSD3Q9BZ95 1437 aa17.26■□□□□ 0.35
LINC00449-201ENST00000366259 PKD1L3Q7Z443 1732 aa17.26■□□□□ 0.35
LINC00449-201ENST00000366259 CDCA8Q53HL2 280 aa17.25■□□□□ 0.35
LINC00449-201ENST00000366259 AMIGO3Q86WK7 504 aa17.25■□□□□ 0.35
LINC00449-201ENST00000366259 KIF24Q5T7B8 1368 aa17.25■□□□□ 0.35
LINC00449-201ENST00000366259 C4BP0C0L5 1744 aa17.24■□□□□ 0.35
LINC00449-201ENST00000366259 SENP3-EIF4A1A0A087X0R7 540 aa17.24■□□□□ 0.35
LINC00449-201ENST00000366259 UBR3Q6ZT12 1888 aa17.24■□□□□ 0.35
LINC00449-201ENST00000366259 PIGBQ92521 554 aa17.23■□□□□ 0.35
LINC00449-201ENST00000366259 ANKRD26Q9UPS8 1709 aa17.23■□□□□ 0.35
LINC00449-201ENST00000366259 TRIM26Q12899 539 aaPredicted RBP17.22■□□□□ 0.35
LINC00449-201ENST00000366259 NCAPD2Q15021 1401 aa17.21■□□□□ 0.34
LINC00449-201ENST00000366259 PHF14O94880 888 aa17.2■□□□□ 0.34
LINC00449-201ENST00000366259 FLAD1Q8NFF5 587 aa17.2■□□□□ 0.34
LINC00449-201ENST00000366259 SMARCC1Q92922 1105 aaPredicted RBP17.2■□□□□ 0.34
LINC00449-201ENST00000366259 AK7Q96M32 723 aa17.2■□□□□ 0.34
LINC00449-201ENST00000366259 EYA1Q99502 592 aa17.2■□□□□ 0.34
LINC00449-201ENST00000366259 GRIN3BO60391 1043 aa17.19■□□□□ 0.34
LINC00449-201ENST00000366259 GIGYF1O75420 1035 aaPredicted RBP17.19■□□□□ 0.34
LINC00449-201ENST00000366259 NKX1-1Q15270 411 aaPredicted RBP17.19■□□□□ 0.34
LINC00449-201ENST00000366259 WASHC2AQ641Q2 1341 aa17.19■□□□□ 0.34
LINC00449-201ENST00000366259 POLR3GLQ9BT43 218 aa17.18■□□□□ 0.34
LINC00449-201ENST00000366259 POLKQ9UBT6 870 aa17.18■□□□□ 0.34
LINC00449-201ENST00000366259 SPG7Q9UQ90 795 aa17.18■□□□□ 0.34
LINC00449-201ENST00000366259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.17■□□□□ 0.34
LINC00449-201ENST00000366259 TNNT2P45379 298 aaPredicted RBP17.17■□□□□ 0.34
LINC00449-201ENST00000366259 LINC00116Q8NCU8 138 aa17.17■□□□□ 0.34
LINC00449-201ENST00000366259 WWC3Q9ULE0 1092 aa17.17■□□□□ 0.34
LINC00449-201ENST00000366259 ASAP1Q9ULH1 1129 aa17.17■□□□□ 0.34
LINC00449-201ENST00000366259 CD2APQ9Y5K6 639 aa17.17■□□□□ 0.34
LINC00449-201ENST00000366259 LOC102724428A0A0B4J2F2 783 aa17.16■□□□□ 0.34
LINC00449-201ENST00000366259 SIK1P57059 783 aa17.16■□□□□ 0.34
LINC00449-201ENST00000366259 TMOD3Q9NYL9 352 aa17.15■□□□□ 0.34
LINC00449-201ENST00000366259 PHKG2P15735 406 aa17.14■□□□□ 0.33
LINC00449-201ENST00000366259 HMGB2P26583 209 aaKnown RBP17.14■□□□□ 0.33
LINC00449-201ENST00000366259 ITPK1Q13572 414 aa17.14■□□□□ 0.33
LINC00449-201ENST00000366259 EIF4A2Q14240 407 aaKnown RBP17.14■□□□□ 0.33
LINC00449-201ENST00000366259 IFNL2Q8IZJ0 200 aa17.13■□□□□ 0.33
LINC00449-201ENST00000366259 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.13■□□□□ 0.33
LINC00449-201ENST00000366259 ATP10DQ9P241 1426 aa17.13■□□□□ 0.33
LINC00449-201ENST00000366259 SSFA2P28290 1259 aa17.12■□□□□ 0.33
LINC00449-201ENST00000366259 ATP6V1AP38606 617 aa17.12■□□□□ 0.33
LINC00449-201ENST00000366259 ATG3Q9NT62 314 aa17.12■□□□□ 0.33
LINC00449-201ENST00000366259 GNPATO15228 680 aa17.11■□□□□ 0.33
LINC00449-201ENST00000366259 IGSF1Q8N6C5 1336 aa17.11■□□□□ 0.33
LINC00449-201ENST00000366259 ZNF526Q8TF50 670 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms