RNA–Protein interactions for RNA: ENST00000366170.6

VSTM1-202, Transcript of V-set and transmembrane domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene VSTM1, Length 654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM1-202ENST00000366170 SPG7Q9UQ90 795 aa17.08■□□□□ 0.32
VSTM1-202ENST00000366170 THRAP3Q9Y2W1 955 aaKnown RBP17.08■□□□□ 0.32
VSTM1-202ENST00000366170 BCL9LQ86UU0 1499 aa17.07■□□□□ 0.32
VSTM1-202ENST00000366170 SPATA31A5Q5VU36 1347 aa17.07■□□□□ 0.32
VSTM1-202ENST00000366170 SPATA31A7Q8IWB4 1347 aa17.07■□□□□ 0.32
VSTM1-202ENST00000366170 NCAPD2Q15021 1401 aa17.06■□□□□ 0.32
VSTM1-202ENST00000366170 PHF23Q9BUL5 403 aaPredicted RBP17.06■□□□□ 0.32
VSTM1-202ENST00000366170 QTRT2Q9H974 415 aaKnown RBP17.06■□□□□ 0.32
VSTM1-202ENST00000366170 TRPC5Q9UL62 973 aaPredicted RBP17.06■□□□□ 0.32
VSTM1-202ENST00000366170 ZCRB1Q8TBF4 217 aaKnown RBP17.05■□□□□ 0.32
VSTM1-202ENST00000366170 CDCA7Q9BWT1 371 aaPredicted RBP17.05■□□□□ 0.32
VSTM1-202ENST00000366170 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.05■□□□□ 0.32
VSTM1-202ENST00000366170 NRAPQ86VF7 1730 aa17.04■□□□□ 0.32
VSTM1-202ENST00000366170 NCBP3Q53F19 620 aaKnown RBP17.04■□□□□ 0.32
VSTM1-202ENST00000366170 ZNF772Q68DY9 489 aaPredicted RBP17.04■□□□□ 0.32
VSTM1-202ENST00000366170 ZNF530Q6P9A1 599 aaPredicted RBP17.04■□□□□ 0.32
VSTM1-202ENST00000366170 GJD4Q96KN9 370 aaPredicted RBP17.04■□□□□ 0.32
VSTM1-202ENST00000366170 EXOC5O00471 708 aa17.03■□□□□ 0.32
VSTM1-202ENST00000366170 LMOD3Q0VAK6 560 aa17.03■□□□□ 0.32
VSTM1-202ENST00000366170 C1orf141Q5JVX7 400 aa17.03■□□□□ 0.32
VSTM1-202ENST00000366170 BARGINQ6ZT62 677 aa17.03■□□□□ 0.32
VSTM1-202ENST00000366170 RTF1Q92541 710 aaKnown RBP17.03■□□□□ 0.32
VSTM1-202ENST00000366170 GNAT3A8MTJ3 354 aa17.02■□□□□ 0.32
VSTM1-202ENST00000366170 CCDC27Q2M243 656 aa17.02■□□□□ 0.32
VSTM1-202ENST00000366170 ZBED9Q6R2W3 1325 aa17.01■□□□□ 0.31
VSTM1-202ENST00000366170 HTATSF1O43719 755 aaKnown RBP17.01■□□□□ 0.31
VSTM1-202ENST00000366170 FAM98CQ17RN3 349 aaKnown RBP17.01■□□□□ 0.31
VSTM1-202ENST00000366170 AKAP4Q5JQC9 854 aa17.01■□□□□ 0.31
VSTM1-202ENST00000366170 WWC1Q8IX03 1113 aa17.01■□□□□ 0.31
VSTM1-202ENST00000366170 A0A0G2JS52 829 aa17■□□□□ 0.31
VSTM1-202ENST00000366170 MYT1Q01538 1121 aa17■□□□□ 0.31
VSTM1-202ENST00000366170 IFNL2Q8IZJ0 200 aa17■□□□□ 0.31
VSTM1-202ENST00000366170 DDX54Q8TDD1 881 aaKnown RBP17■□□□□ 0.31
VSTM1-202ENST00000366170 TRIM35Q9UPQ4 493 aa17■□□□□ 0.31
VSTM1-202ENST00000366170 MEGF6O75095 1541 aa17■□□□□ 0.31
VSTM1-202ENST00000366170 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.99■□□□□ 0.31
VSTM1-202ENST00000366170 DDB1Q16531 1140 aa16.99■□□□□ 0.31
VSTM1-202ENST00000366170 WDR63Q8IWG1 891 aa16.99■□□□□ 0.31
VSTM1-202ENST00000366170 PLEKHG2Q9H7P9 1386 aa16.99■□□□□ 0.31
VSTM1-202ENST00000366170 OVOS2A0A0G2JMS6 1433 aa16.98■□□□□ 0.31
VSTM1-202ENST00000366170 DCTN1Q14203 1278 aa16.98■□□□□ 0.31
VSTM1-202ENST00000366170 DLG5Q8TDM6 1919 aa16.98■□□□□ 0.31
VSTM1-202ENST00000366170 ATRNO75882 1429 aa16.97■□□□□ 0.31
VSTM1-202ENST00000366170 HSP90AB1P08238 724 aaKnown RBP16.97■□□□□ 0.31
VSTM1-202ENST00000366170 PHKG2P15735 406 aa16.97■□□□□ 0.31
VSTM1-202ENST00000366170 CALD1Q05682 793 aaKnown RBP16.97■□□□□ 0.31
VSTM1-202ENST00000366170 GOLGA2Q08379 1002 aa16.97■□□□□ 0.31
VSTM1-202ENST00000366170 PDE3BQ13370 1112 aa16.97■□□□□ 0.31
VSTM1-202ENST00000366170 MAP3K5Q99683 1374 aa16.97■□□□□ 0.31
VSTM1-202ENST00000366170 PCDH11XQ9BZA7 1347 aa16.96■□□□□ 0.31
VSTM1-202ENST00000366170 PCDH11YQ9BZA8 1340 aa16.96■□□□□ 0.31
VSTM1-202ENST00000366170 PARP4Q9UKK3 1724 aaKnown RBP16.96■□□□□ 0.31
VSTM1-202ENST00000366170 CYP27B1O15528 508 aa16.96■□□□□ 0.31
VSTM1-202ENST00000366170 MPRIPQ6WCQ1 1025 aa16.96■□□□□ 0.31
VSTM1-202ENST00000366170 MCM10Q7L590 875 aa16.96■□□□□ 0.31
VSTM1-202ENST00000366170 RBM6P78332 1123 aaKnown RBP16.95■□□□□ 0.3
VSTM1-202ENST00000366170 IL17REQ8NFR9 667 aa16.95■□□□□ 0.3
VSTM1-202ENST00000366170 THUMPD2Q9BTF0 503 aaKnown RBP16.95■□□□□ 0.3
VSTM1-202ENST00000366170 LGR6Q9HBX8 967 aa16.95■□□□□ 0.3
VSTM1-202ENST00000366170 DISP2A7MBM2 1401 aa16.95■□□□□ 0.3
VSTM1-202ENST00000366170 RNMTO43148 476 aaKnown RBP16.94■□□□□ 0.3
VSTM1-202ENST00000366170 ONECUT3O60422 494 aaPredicted RBP16.94■□□□□ 0.3
VSTM1-202ENST00000366170 LAS1LQ9Y4W2 734 aaKnown RBP16.94■□□□□ 0.3
VSTM1-202ENST00000366170 ZNF521Q96K83 1311 aa16.94■□□□□ 0.3
VSTM1-202ENST00000366170 RXRBP28702 533 aa16.93■□□□□ 0.3
VSTM1-202ENST00000366170 CDCA7LQ96GN5 454 aa16.93■□□□□ 0.3
VSTM1-202ENST00000366170 DCAF5Q96JK2 942 aa16.93■□□□□ 0.3
VSTM1-202ENST00000366170 KAT6BQ8WYB5 2073 aa16.92■□□□□ 0.3
VSTM1-202ENST00000366170 TEFQ10587 303 aa16.92■□□□□ 0.3
VSTM1-202ENST00000366170 POTEAQ6S8J7 498 aa16.92■□□□□ 0.3
VSTM1-202ENST00000366170 SEPT12Q8IYM1 358 aa16.92■□□□□ 0.3
VSTM1-202ENST00000366170 IL16Q14005 1332 aa16.92■□□□□ 0.3
VSTM1-202ENST00000366170 PKD1L3Q7Z443 1732 aa16.91■□□□□ 0.3
VSTM1-202ENST00000366170 E9PSI1 815 aa16.91■□□□□ 0.3
VSTM1-202ENST00000366170 GNAI1P63096 354 aa16.91■□□□□ 0.3
VSTM1-202ENST00000366170 SLFN5Q08AF3 891 aa16.91■□□□□ 0.3
VSTM1-202ENST00000366170 NKX1-1Q15270 411 aaPredicted RBP16.91■□□□□ 0.3
VSTM1-202ENST00000366170 GLI3P10071 1580 aa16.9■□□□□ 0.3
VSTM1-202ENST00000366170 CENPBP07199 599 aaPredicted RBP16.9■□□□□ 0.3
VSTM1-202ENST00000366170 TAF7Q15545 349 aaPredicted RBP16.9■□□□□ 0.3
VSTM1-202ENST00000366170 MYH16Q9H6N6 1097 aa16.9■□□□□ 0.3
VSTM1-202ENST00000366170 WNK3Q9BYP7 1800 aa16.89■□□□□ 0.29
VSTM1-202ENST00000366170 CABP4P57796 275 aa16.89■□□□□ 0.29
VSTM1-202ENST00000366170 IFT57Q9NWB7 429 aa16.89■□□□□ 0.29
VSTM1-202ENST00000366170 ERVV-2B6SEH9 535 aa16.88■□□□□ 0.29
VSTM1-202ENST00000366170 MARCH10Q8NA82 808 aaPredicted RBP16.88■□□□□ 0.29
VSTM1-202ENST00000366170 CFAP44Q96MT7 982 aa16.88■□□□□ 0.29
VSTM1-202ENST00000366170 SPINK5Q9NQ38 1064 aaPredicted RBP16.88■□□□□ 0.29
VSTM1-202ENST00000366170 TNS2Q63HR2 1409 aa16.87■□□□□ 0.29
VSTM1-202ENST00000366170 NFATC2IPQ8NCF5 419 aa16.87■□□□□ 0.29
VSTM1-202ENST00000366170 MIS18AQ9NYP9 233 aa16.87■□□□□ 0.29
VSTM1-202ENST00000366170 CHL1O00533 1208 aa16.86■□□□□ 0.29
VSTM1-202ENST00000366170 SLC52A2Q9HAB3 445 aa16.86■□□□□ 0.29
VSTM1-202ENST00000366170 CEMIPQ8WUJ3 1361 aa16.86■□□□□ 0.29
VSTM1-202ENST00000366170 VIRMAQ69YN4 1812 aaKnown RBP16.85■□□□□ 0.29
VSTM1-202ENST00000366170 BTBD11A6QL63 1104 aa16.85■□□□□ 0.29
VSTM1-202ENST00000366170 ZNF853P0CG23 659 aa16.85■□□□□ 0.29
VSTM1-202ENST00000366170 TRMT2AQ8IZ69 625 aaKnown RBP16.85■□□□□ 0.29
VSTM1-202ENST00000366170 BABAM1Q9NWV8 329 aa16.85■□□□□ 0.29
VSTM1-202ENST00000366170 TSPYL4Q9UJ04 414 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms