RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 INTS6LQ5JSJ4 861 aaKnown RBP9.12□□□□□ -0.95
RNU4-4P-201ENST00000364588 SEPT12Q8IYM1 358 aa9.12□□□□□ -0.95
RNU4-4P-201ENST00000364588 KIFC2Q96AC6 838 aa9.12□□□□□ -0.95
RNU4-4P-201ENST00000364588 KLF16Q9BXK1 252 aaPredicted RBP9.12□□□□□ -0.95
RNU4-4P-201ENST00000364588 SHROOM2Q13796 1616 aa9.12□□□□□ -0.95
RNU4-4P-201ENST00000364588 ERICH3Q5RHP9 1530 aa9.11□□□□□ -0.95
RNU4-4P-201ENST00000364588 CCDC125Q86Z20 511 aa9.11□□□□□ -0.95
RNU4-4P-201ENST00000364588 ITPKCQ96DU7 683 aa9.11□□□□□ -0.95
RNU4-4P-201ENST00000364588 BMP1P13497 986 aa9.1□□□□□ -0.95
RNU4-4P-201ENST00000364588 GMPR2Q9P2T1 348 aaKnown RBP9.1□□□□□ -0.95
RNU4-4P-201ENST00000364588 DACH1Q9UI36 760 aa9.1□□□□□ -0.95
RNU4-4P-201ENST00000364588 ESPNB1AK53 854 aa9.09□□□□□ -0.95
RNU4-4P-201ENST00000364588 SCARF1Q14162 830 aa9.09□□□□□ -0.95
RNU4-4P-201ENST00000364588 PPP1R26Q5T8A7 1209 aaPredicted RBP9.09□□□□□ -0.95
RNU4-4P-201ENST00000364588 WWC1Q8IX03 1113 aa9.09□□□□□ -0.95
RNU4-4P-201ENST00000364588 MEIOBQ8N635 442 aa9.09□□□□□ -0.95
RNU4-4P-201ENST00000364588 ZFAND3Q9H8U3 227 aa9.09□□□□□ -0.95
RNU4-4P-201ENST00000364588 UPP2O95045 317 aa9.08□□□□□ -0.96
RNU4-4P-201ENST00000364588 RNF20Q5VTR2 975 aa9.08□□□□□ -0.96
RNU4-4P-201ENST00000364588 MRPL14Q6P1L8 145 aaKnown RBP9.08□□□□□ -0.96
RNU4-4P-201ENST00000364588 TRIM47Q96LD4 638 aa9.08□□□□□ -0.96
RNU4-4P-201ENST00000364588 GDPD2Q9HCC8 539 aa9.08□□□□□ -0.96
RNU4-4P-201ENST00000364588 PRG4Q92954 1404 aaPredicted RBP9.07□□□□□ -0.96
RNU4-4P-201ENST00000364588 C11orf95C9JLR9 678 aaPredicted RBP9.07□□□□□ -0.96
RNU4-4P-201ENST00000364588 ABL2P42684 1182 aa9.07□□□□□ -0.96
RNU4-4P-201ENST00000364588 EIF4G2P78344 907 aaKnown RBP eCLIP9.07□□□□□ -0.96
RNU4-4P-201ENST00000364588 WASHC4Q2M389 1173 aa9.07□□□□□ -0.96
RNU4-4P-201ENST00000364588 TRIM46Q7Z4K8 759 aa9.07□□□□□ -0.96
RNU4-4P-201ENST00000364588 RAD21O60216 631 aa9.06□□□□□ -0.96
RNU4-4P-201ENST00000364588 UBTFP17480 764 aaKnown RBP9.06□□□□□ -0.96
RNU4-4P-201ENST00000364588 RUSC2Q8N2Y8 1516 aa9.05□□□□□ -0.96
RNU4-4P-201ENST00000364588 KIF13AQ9H1H9 1805 aa9.05□□□□□ -0.96
RNU4-4P-201ENST00000364588 RAB15P59190 212 aa9.05□□□□□ -0.96
RNU4-4P-201ENST00000364588 IRF5Q13568 498 aa9.05□□□□□ -0.96
RNU4-4P-201ENST00000364588 LINC00528Q8N1L1 170 aa9.05□□□□□ -0.96
RNU4-4P-201ENST00000364588 COG6Q9Y2V7 657 aa9.05□□□□□ -0.96
RNU4-4P-201ENST00000364588 TSEN34Q9BSV6 310 aaKnown RBP9.04□□□□□ -0.96
RNU4-4P-201ENST00000364588 POTECB2RU33 542 aa9.03□□□□□ -0.96
RNU4-4P-201ENST00000364588 ERVH48-1M5A8F1 160 aa9.03□□□□□ -0.96
RNU4-4P-201ENST00000364588 SOX11P35716 441 aa9.03□□□□□ -0.96
RNU4-4P-201ENST00000364588 GIGYF1O75420 1035 aaPredicted RBP9.02□□□□□ -0.97
RNU4-4P-201ENST00000364588 Q6ZVU0 165 aa9.02□□□□□ -0.97
RNU4-4P-201ENST00000364588 ZNF784Q8NCA9 323 aaPredicted RBP9.02□□□□□ -0.97
RNU4-4P-201ENST00000364588 ZFP42Q96MM3 310 aa9.02□□□□□ -0.97
RNU4-4P-201ENST00000364588 PURBQ96QR8 312 aaKnown RBP9.02□□□□□ -0.97
RNU4-4P-201ENST00000364588 BMP2P12643 396 aa9.01□□□□□ -0.97
RNU4-4P-201ENST00000364588 VAC14Q08AM6 782 aa9□□□□□ -0.97
RNU4-4P-201ENST00000364588 C6orf118Q5T5N4 469 aa9□□□□□ -0.97
RNU4-4P-201ENST00000364588 IGF1RP08069 1367 aa8.99□□□□□ -0.97
RNU4-4P-201ENST00000364588 KIF27Q86VH2 1401 aa8.99□□□□□ -0.97
RNU4-4P-201ENST00000364588 ADCY10Q96PN6 1610 aa8.99□□□□□ -0.97
RNU4-4P-201ENST00000364588 ADH1AP07327 375 aa8.99□□□□□ -0.97
RNU4-4P-201ENST00000364588 SNRPBP14678 240 aaKnown RBP8.99□□□□□ -0.97
RNU4-4P-201ENST00000364588 CBLBQ13191 982 aa8.99□□□□□ -0.97
RNU4-4P-201ENST00000364588 TMPRSS4Q9NRS4 437 aa8.99□□□□□ -0.97
RNU4-4P-201ENST00000364588 CUL7Q14999 1698 aa8.99□□□□□ -0.97
RNU4-4P-201ENST00000364588 FAM69CQ0P6D2 419 aa8.98□□□□□ -0.97
RNU4-4P-201ENST00000364588 CYLDQ9NQC7 956 aa8.98□□□□□ -0.97
RNU4-4P-201ENST00000364588 KIAA0586Q9BVV6 1533 aa8.98□□□□□ -0.97
RNU4-4P-201ENST00000364588 LILRA1O75019 489 aa8.97□□□□□ -0.97
RNU4-4P-201ENST00000364588 SEMA3FQ13275 785 aa8.97□□□□□ -0.97
RNU4-4P-201ENST00000364588 SLFNL1Q499Z3 407 aa8.97□□□□□ -0.97
RNU4-4P-201ENST00000364588 CC2D2BQ6DHV5 1058 aa8.97□□□□□ -0.97
RNU4-4P-201ENST00000364588 POM121Q96HA1 1249 aa8.97□□□□□ -0.97
RNU4-4P-201ENST00000364588 CEP126Q9P2H0 1117 aa8.97□□□□□ -0.97
RNU4-4P-201ENST00000364588 PCDHB11Q9Y5F2 797 aa8.97□□□□□ -0.97
RNU4-4P-201ENST00000364588 TTBK1Q5TCY1 1321 aaPredicted RBP8.97□□□□□ -0.97
RNU4-4P-201ENST00000364588 ABCC10Q5T3U5 1492 aa8.96□□□□□ -0.97
RNU4-4P-201ENST00000364588 DIP2BQ9P265 1576 aa8.96□□□□□ -0.97
RNU4-4P-201ENST00000364588 SPINT1O43278 529 aa8.96□□□□□ -0.98
RNU4-4P-201ENST00000364588 ERVK-9P63128 1117 aa8.96□□□□□ -0.98
RNU4-4P-201ENST00000364588 ESF1Q9H501 851 aaKnown RBP8.96□□□□□ -0.98
RNU4-4P-201ENST00000364588 MAPKBP1O60336 1514 aa8.95□□□□□ -0.98
RNU4-4P-201ENST00000364588 MAN1A2O60476 641 aa8.95□□□□□ -0.98
RNU4-4P-201ENST00000364588 CYP2U1Q7Z449 544 aa8.95□□□□□ -0.98
RNU4-4P-201ENST00000364588 RNF135Q8IUD6 432 aa8.95□□□□□ -0.98
RNU4-4P-201ENST00000364588 TSPOAP1O95153 1857 aa8.95□□□□□ -0.98
RNU4-4P-201ENST00000364588 MYCP01106 439 aaPredicted RBP8.94□□□□□ -0.98
RNU4-4P-201ENST00000364588 RELBQ01201 579 aa8.94□□□□□ -0.98
RNU4-4P-201ENST00000364588 CARMIL1Q5VZK9 1371 aa8.94□□□□□ -0.98
RNU4-4P-201ENST00000364588 TTLL8A6PVC2 850 aa8.93□□□□□ -0.98
RNU4-4P-201ENST00000364588 ZNF775Q96BV0 537 aaPredicted RBP8.93□□□□□ -0.98
RNU4-4P-201ENST00000364588 DOLKQ9UPQ8 538 aa8.93□□□□□ -0.98
RNU4-4P-201ENST00000364588 SOS2Q07890 1332 aaPredicted RBP8.93□□□□□ -0.98
RNU4-4P-201ENST00000364588 PTPRGP23470 1445 aa8.92□□□□□ -0.98
RNU4-4P-201ENST00000364588 ATP5J2-PTCD1G3V325 749 aa8.92□□□□□ -0.98
RNU4-4P-201ENST00000364588 PTGIRP43119 386 aa8.92□□□□□ -0.98
RNU4-4P-201ENST00000364588 PROSER2Q86WR7 435 aaPredicted RBP8.92□□□□□ -0.98
RNU4-4P-201ENST00000364588 AGBL1Q96MI9 1066 aa8.92□□□□□ -0.98
RNU4-4P-201ENST00000364588 KDM6BO15054 1643 aa8.91□□□□□ -0.98
RNU4-4P-201ENST00000364588 IQGAP2Q13576 1575 aa8.9□□□□□ -0.98
RNU4-4P-201ENST00000364588 ADD1P35611 737 aaKnown RBP8.9□□□□□ -0.98
RNU4-4P-201ENST00000364588 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.9□□□□□ -0.98
RNU4-4P-201ENST00000364588 MAP7D1Q3KQU3 841 aa8.9□□□□□ -0.98
RNU4-4P-201ENST00000364588 NPAS3Q8IXF0 933 aa8.9□□□□□ -0.98
RNU4-4P-201ENST00000364588 SIRT1Q96EB6 747 aa8.9□□□□□ -0.98
RNU4-4P-201ENST00000364588 CCDC85AQ96PX6 553 aaPredicted RBP8.9□□□□□ -0.98
RNU4-4P-201ENST00000364588 POLMQ9NP87 494 aaPredicted RBP8.9□□□□□ -0.98
RNU4-4P-201ENST00000364588 CARMIL2Q6F5E8 1435 aa8.89□□□□□ -0.99
RNU4-4P-201ENST00000364588 TNIKQ9UKE5 1360 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms