RNA–Protein interactions for RNA: ENST00000364587.1

SNORA55-201, Transcript of small nucleolar RNA, H/ACA box 55, humanhuman

BASIC

Gene SNORA55, Length 135 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA55-201ENST00000364587 RRAGCQ9HB90 399 aa13.03□□□□□ -0.32
SNORA55-201ENST00000364587 SRPK2P78362 688 aaKnown RBP13.02□□□□□ -0.33
SNORA55-201ENST00000364587 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.33
SNORA55-201ENST00000364587 KDM2BQ8NHM5 1336 aa13.02□□□□□ -0.33
SNORA55-201ENST00000364587 HMGB2P26583 209 aaKnown RBP13.01□□□□□ -0.33
SNORA55-201ENST00000364587 PRDM10Q9NQV6 1147 aa13.01□□□□□ -0.33
SNORA55-201ENST00000364587 BCS1LQ9Y276 419 aa13.01□□□□□ -0.33
SNORA55-201ENST00000364587 CICQ96RK0 1608 aaPredicted RBP13.01□□□□□ -0.33
SNORA55-201ENST00000364587 MLLT1Q03111 559 aaPredicted RBP12.99□□□□□ -0.33
SNORA55-201ENST00000364587 C9orf131Q5VYM1 1079 aa12.99□□□□□ -0.33
SNORA55-201ENST00000364587 PPARGC1BQ86YN6 1023 aaKnown RBP12.99□□□□□ -0.33
SNORA55-201ENST00000364587 CABP2Q9NPB3 220 aa12.99□□□□□ -0.33
SNORA55-201ENST00000364587 CABP1Q9NZU7 370 aa12.99□□□□□ -0.33
SNORA55-201ENST00000364587 ANKRD36BQ8N2N9 1353 aa12.98□□□□□ -0.33
SNORA55-201ENST00000364587 LY75O60449 1722 aa12.98□□□□□ -0.33
SNORA55-201ENST00000364587 USP47Q96K76 1375 aa12.97□□□□□ -0.33
SNORA55-201ENST00000364587 PLEKHG2Q9H7P9 1386 aa12.97□□□□□ -0.33
SNORA55-201ENST00000364587 ERBB3P21860 1342 aa12.97□□□□□ -0.33
SNORA55-201ENST00000364587 PIK3C2AO00443 1686 aa12.97□□□□□ -0.33
SNORA55-201ENST00000364587 DCAF11Q8TEB1 546 aa12.97□□□□□ -0.33
SNORA55-201ENST00000364587 C10orf71Q711Q0 1435 aa12.96□□□□□ -0.33
SNORA55-201ENST00000364587 FOXN1O15353 648 aa12.96□□□□□ -0.33
SNORA55-201ENST00000364587 TGFB2P61812 414 aa12.96□□□□□ -0.33
SNORA55-201ENST00000364587 KCPQ6ZWJ8 1503 aa12.96□□□□□ -0.33
SNORA55-201ENST00000364587 STAC3Q96MF2 364 aa12.95□□□□□ -0.34
SNORA55-201ENST00000364587 NSD2O96028 1365 aa12.94□□□□□ -0.34
SNORA55-201ENST00000364587 TTC21BQ7Z4L5 1316 aa12.94□□□□□ -0.34
SNORA55-201ENST00000364587 A0A0G2JLW4 131 aa12.94□□□□□ -0.34
SNORA55-201ENST00000364587 FCHSD2O94868 740 aa12.94□□□□□ -0.34
SNORA55-201ENST00000364587 ABHD8Q96I13 439 aa12.94□□□□□ -0.34
SNORA55-201ENST00000364587 PHF14O94880 888 aa12.93□□□□□ -0.34
SNORA55-201ENST00000364587 CTCFP49711 727 aaPredicted RBP12.93□□□□□ -0.34
SNORA55-201ENST00000364587 SMIM5Q71RC9 77 aa12.93□□□□□ -0.34
SNORA55-201ENST00000364587 ANKRD24Q8TF21 1146 aa12.93□□□□□ -0.34
SNORA55-201ENST00000364587 AK7Q96M32 723 aa12.93□□□□□ -0.34
SNORA55-201ENST00000364587 ZNF692Q9BU19 519 aaPredicted RBP12.93□□□□□ -0.34
SNORA55-201ENST00000364587 RGS19P49795 217 aa12.92□□□□□ -0.34
SNORA55-201ENST00000364587 RNF181Q9P0P0 153 aa12.92□□□□□ -0.34
SNORA55-201ENST00000364587 PXDNLA1KZ92 1463 aa12.91□□□□□ -0.34
SNORA55-201ENST00000364587 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.91□□□□□ -0.34
SNORA55-201ENST00000364587 AIDAQ96BJ3 306 aa12.91□□□□□ -0.34
SNORA55-201ENST00000364587 VEGFAP15692 232 aaPredicted RBP12.9□□□□□ -0.34
SNORA55-201ENST00000364587 AMIGO3Q86WK7 504 aa12.9□□□□□ -0.34
SNORA55-201ENST00000364587 MKRN1Q9UHC7 482 aaKnown RBP12.9□□□□□ -0.34
SNORA55-201ENST00000364587 TTC21AQ8NDW8 1320 aa12.89□□□□□ -0.35
SNORA55-201ENST00000364587 NFAT5O94916 1531 aa12.89□□□□□ -0.35
SNORA55-201ENST00000364587 ZCRB1Q8TBF4 217 aaKnown RBP12.89□□□□□ -0.35
SNORA55-201ENST00000364587 C5P01031 1676 aa12.89□□□□□ -0.35
SNORA55-201ENST00000364587 CCDC85CA6NKD9 419 aa12.88□□□□□ -0.35
SNORA55-201ENST00000364587 MMP10P09238 476 aa12.88□□□□□ -0.35
SNORA55-201ENST00000364587 DPEP1P16444 411 aa12.88□□□□□ -0.35
SNORA55-201ENST00000364587 SSFA2P28290 1259 aa12.88□□□□□ -0.35
SNORA55-201ENST00000364587 LBX1P52954 281 aa12.88□□□□□ -0.35
SNORA55-201ENST00000364587 USP54Q70EL1 1684 aa12.88□□□□□ -0.35
SNORA55-201ENST00000364587 TNRC6CQ9HCJ0 1690 aaKnown RBP12.88□□□□□ -0.35
SNORA55-201ENST00000364587 DOT1LQ8TEK3 1739 aa12.88□□□□□ -0.35
SNORA55-201ENST00000364587 N4BP2Q86UW6 1770 aaPredicted RBP12.87□□□□□ -0.35
SNORA55-201ENST00000364587 CREBZFQ9NS37 354 aa12.87□□□□□ -0.35
SNORA55-201ENST00000364587 NSD3Q9BZ95 1437 aa12.87□□□□□ -0.35
SNORA55-201ENST00000364587 QRICH2Q9H0J4 1663 aa12.86□□□□□ -0.35
SNORA55-201ENST00000364587 PALLDQ8WX93 1383 aa12.85□□□□□ -0.35
SNORA55-201ENST00000364587 PIM2Q9P1W9 311 aa12.85□□□□□ -0.35
SNORA55-201ENST00000364587 CENPJQ9HC77 1338 aaPredicted RBP12.85□□□□□ -0.35
SNORA55-201ENST00000364587 PKD1L3Q7Z443 1732 aa12.85□□□□□ -0.35
SNORA55-201ENST00000364587 GLTPD2A6NH11 291 aa12.84□□□□□ -0.35
SNORA55-201ENST00000364587 KCNA3P22001 575 aa12.84□□□□□ -0.35
SNORA55-201ENST00000364587 DCAF5Q96JK2 942 aa12.84□□□□□ -0.35
SNORA55-201ENST00000364587 CCDC87Q9NVE4 849 aa12.84□□□□□ -0.35
SNORA55-201ENST00000364587 TAF1LQ8IZX4 1826 aa12.83□□□□□ -0.35
SNORA55-201ENST00000364587 C4BP0C0L5 1744 aa12.83□□□□□ -0.36
SNORA55-201ENST00000364587 KIAA1210Q9ULL0 1709 aa12.83□□□□□ -0.36
SNORA55-201ENST00000364587 DALRD3Q5D0E6 543 aaKnown RBP12.83□□□□□ -0.36
SNORA55-201ENST00000364587 SMARCC1Q92922 1105 aaPredicted RBP12.83□□□□□ -0.36
SNORA55-201ENST00000364587 LTV1Q96GA3 475 aaPredicted RBP12.83□□□□□ -0.36
SNORA55-201ENST00000364587 ZC3H4Q9UPT8 1303 aaKnown RBP12.83□□□□□ -0.36
SNORA55-201ENST00000364587 KIF13BQ9NQT8 1826 aa12.83□□□□□ -0.36
SNORA55-201ENST00000364587 KIAA1551Q9HCM1 1747 aa12.82□□□□□ -0.36
SNORA55-201ENST00000364587 MPRIPQ6WCQ1 1025 aa12.82□□□□□ -0.36
SNORA55-201ENST00000364587 NLGN1Q8N2Q7 840 aa12.82□□□□□ -0.36
SNORA55-201ENST00000364587 WBP1LQ9NX94 342 aa12.82□□□□□ -0.36
SNORA55-201ENST00000364587 CNTNAP1P78357 1384 aa12.81□□□□□ -0.36
SNORA55-201ENST00000364587 UBR3Q6ZT12 1888 aa12.81□□□□□ -0.36
SNORA55-201ENST00000364587 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.81□□□□□ -0.36
SNORA55-201ENST00000364587 IP6K1Q92551 441 aa12.81□□□□□ -0.36
SNORA55-201ENST00000364587 TOGARAM1Q9Y4F4 1720 aa12.8□□□□□ -0.36
SNORA55-201ENST00000364587 GNPATO15228 680 aa12.8□□□□□ -0.36
SNORA55-201ENST00000364587 TMF1P82094 1093 aa12.8□□□□□ -0.36
SNORA55-201ENST00000364587 USP31Q70CQ4 1352 aa12.8□□□□□ -0.36
SNORA55-201ENST00000364587 KTN1Q86UP2 1357 aaKnown RBP12.8□□□□□ -0.36
SNORA55-201ENST00000364587 ARFGEF1Q9Y6D6 1849 aa12.79□□□□□ -0.36
SNORA55-201ENST00000364587 HSPA8P11142 646 aaKnown RBP12.79□□□□□ -0.36
SNORA55-201ENST00000364587 VEGFBP49765 207 aa12.79□□□□□ -0.36
SNORA55-201ENST00000364587 NBPF1Q3BBV0 1214 aa12.79□□□□□ -0.36
SNORA55-201ENST00000364587 LINC00116Q8NCU8 138 aa12.79□□□□□ -0.36
SNORA55-201ENST00000364587 EVC2Q86UK5 1308 aa12.79□□□□□ -0.36
SNORA55-201ENST00000364587 CFAP44Q96MT7 982 aa12.78□□□□□ -0.36
SNORA55-201ENST00000364587 PARP3Q9Y6F1 533 aa12.78□□□□□ -0.36
SNORA55-201ENST00000364587 LTN1O94822 1766 aa12.78□□□□□ -0.36
SNORA55-201ENST00000364587 SBF1O95248 1867 aa12.78□□□□□ -0.36
SNORA55-201ENST00000364587 BRCA1P38398 1863 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms