RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 AAASQ9NRG9 546 aa6.77□□□□□ -1.33
RNU4-1-201ENST00000363925 NOD1Q9Y239 953 aa6.77□□□□□ -1.33
RNU4-1-201ENST00000363925 USP17L3A6NCW0 530 aa6.76□□□□□ -1.33
RNU4-1-201ENST00000363925 USP17L4A6NCW7 530 aa6.76□□□□□ -1.33
RNU4-1-201ENST00000363925 ATP5J2-PTCD1G3V325 749 aa6.76□□□□□ -1.33
RNU4-1-201ENST00000363925 MEN1O00255 615 aa6.76□□□□□ -1.33
RNU4-1-201ENST00000363925 ADH1AP07327 375 aa6.76□□□□□ -1.33
RNU4-1-201ENST00000363925 MRPL14Q6P1L8 145 aaKnown RBP6.76□□□□□ -1.33
RNU4-1-201ENST00000363925 USP17L2Q6R6M4 530 aa6.76□□□□□ -1.33
RNU4-1-201ENST00000363925 USP17L1Q7RTZ2 530 aa6.76□□□□□ -1.33
RNU4-1-201ENST00000363925 CCDC82Q8N4S0 544 aa6.76□□□□□ -1.33
RNU4-1-201ENST00000363925 POLMQ9NP87 494 aaPredicted RBP6.76□□□□□ -1.33
RNU4-1-201ENST00000363925 DACH1Q9UI36 760 aa6.76□□□□□ -1.33
RNU4-1-201ENST00000363925 SERPINA10Q9UK55 444 aa6.76□□□□□ -1.33
RNU4-1-201ENST00000363925 LILRA1O75019 489 aa6.75□□□□□ -1.33
RNU4-1-201ENST00000363925 ADD1P35611 737 aaKnown RBP6.75□□□□□ -1.33
RNU4-1-201ENST00000363925 ERVK-9P63128 1117 aa6.75□□□□□ -1.33
RNU4-1-201ENST00000363925 LINC00528Q8N1L1 170 aa6.75□□□□□ -1.33
RNU4-1-201ENST00000363925 MEIOBQ8N635 442 aa6.75□□□□□ -1.33
RNU4-1-201ENST00000363925 NFATC2IPQ8NCF5 419 aa6.75□□□□□ -1.33
RNU4-1-201ENST00000363925 TSEN34Q9BSV6 310 aaKnown RBP6.75□□□□□ -1.33
RNU4-1-201ENST00000363925 KLF16Q9BXK1 252 aaPredicted RBP6.75□□□□□ -1.33
RNU4-1-201ENST00000363925 ATP13A2Q9NQ11 1180 aa6.75□□□□□ -1.33
RNU4-1-201ENST00000363925 RAB6BQ9NRW1 208 aa6.75□□□□□ -1.33
RNU4-1-201ENST00000363925 RBM19Q9Y4C8 960 aaKnown RBP6.75□□□□□ -1.33
RNU4-1-201ENST00000363925 SMCPP49901 116 aaPredicted RBP6.74□□□□□ -1.33
RNU4-1-201ENST00000363925 NLRP3Q96P20 1036 aa6.74□□□□□ -1.33
RNU4-1-201ENST00000363925 ARHGEF10LQ9HCE6 1279 aa6.74□□□□□ -1.33
RNU4-1-201ENST00000363925 MKRN1Q9UHC7 482 aaKnown RBP6.74□□□□□ -1.33
RNU4-1-201ENST00000363925 MAFBQ9Y5Q3 323 aaPredicted RBP6.74□□□□□ -1.33
RNU4-1-201ENST00000363925 PTGIRP43119 386 aa6.73□□□□□ -1.33
RNU4-1-201ENST00000363925 GTF2IP78347 998 aa6.73□□□□□ -1.33
RNU4-1-201ENST00000363925 TRIM46Q7Z4K8 759 aa6.73□□□□□ -1.33
RNU4-1-201ENST00000363925 TRIM50Q86XT4 487 aa6.73□□□□□ -1.33
RNU4-1-201ENST00000363925 ZFP42Q96MM3 310 aa6.73□□□□□ -1.33
RNU4-1-201ENST00000363925 OSBPL3Q9H4L5 887 aa6.73□□□□□ -1.33
RNU4-1-201ENST00000363925 GMPR2Q9P2T1 348 aaKnown RBP6.73□□□□□ -1.33
RNU4-1-201ENST00000363925 FIGNL2A6NMB9 653 aa6.72□□□□□ -1.33
RNU4-1-201ENST00000363925 LZTS3O60299 673 aaPredicted RBP6.72□□□□□ -1.33
RNU4-1-201ENST00000363925 LARP1Q6PKG0 1096 aaKnown RBP6.72□□□□□ -1.33
RNU4-1-201ENST00000363925 Q6ZVU0 165 aa6.72□□□□□ -1.33
RNU4-1-201ENST00000363925 CRIPAKQ8N1N5 446 aa6.72□□□□□ -1.33
RNU4-1-201ENST00000363925 ZNF594Q96JF6 807 aaPredicted RBP6.72□□□□□ -1.33
RNU4-1-201ENST00000363925 INSM2Q96T92 566 aaPredicted RBP6.72□□□□□ -1.33
RNU4-1-201ENST00000363925 VRTNQ9H8Y1 702 aa6.72□□□□□ -1.33
RNU4-1-201ENST00000363925 STAU1O95793 577 aaKnown RBP6.71□□□□□ -1.34
RNU4-1-201ENST00000363925 RASA1P20936 1047 aa6.71□□□□□ -1.34
RNU4-1-201ENST00000363925 GTF2E1P29083 439 aaPredicted RBP6.71□□□□□ -1.34
RNU4-1-201ENST00000363925 ATP1A2P50993 1020 aa6.71□□□□□ -1.34
RNU4-1-201ENST00000363925 ESCO1Q5FWF5 840 aa6.71□□□□□ -1.34
RNU4-1-201ENST00000363925 C1orf115Q9H7X2 142 aa6.71□□□□□ -1.34
RNU4-1-201ENST00000363925 SENP2Q9HC62 589 aa6.71□□□□□ -1.34
RNU4-1-201ENST00000363925 DNAAF2Q9NVR5 837 aaKnown RBP6.71□□□□□ -1.34
RNU4-1-201ENST00000363925 SERTAD1Q9UHV2 236 aa6.71□□□□□ -1.34
RNU4-1-201ENST00000363925 A0A1W2PRU2 124 aa6.7□□□□□ -1.34
RNU4-1-201ENST00000363925 C11orf95C9JLR9 678 aaPredicted RBP6.7□□□□□ -1.34
RNU4-1-201ENST00000363925 MAN1A2O60476 641 aa6.7□□□□□ -1.34
RNU4-1-201ENST00000363925 SLC27A3Q5K4L6 730 aa6.7□□□□□ -1.34
RNU4-1-201ENST00000363925 PLEKHM2Q8IWE5 1019 aa6.7□□□□□ -1.34
RNU4-1-201ENST00000363925 OGFOD1Q8N543 542 aa6.7□□□□□ -1.34
RNU4-1-201ENST00000363925 TPCN2Q8NHX9 752 aa6.7□□□□□ -1.34
RNU4-1-201ENST00000363925 CHIC2Q9UKJ5 165 aa6.7□□□□□ -1.34
RNU4-1-201ENST00000363925 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.69□□□□□ -1.34
RNU4-1-201ENST00000363925 SOBPA7XYQ1 873 aa6.69□□□□□ -1.34
RNU4-1-201ENST00000363925 GNRH1P01148 92 aa6.69□□□□□ -1.34
RNU4-1-201ENST00000363925 GDF10P55107 478 aa6.69□□□□□ -1.34
RNU4-1-201ENST00000363925 CFAP70Q5T0N1 1121 aa6.69□□□□□ -1.34
RNU4-1-201ENST00000363925 ZNF787Q6DD87 383 aa6.69□□□□□ -1.34
RNU4-1-201ENST00000363925 KIFC2Q96AC6 838 aa6.69□□□□□ -1.34
RNU4-1-201ENST00000363925 TTLL8A6PVC2 850 aa6.68□□□□□ -1.34
RNU4-1-201ENST00000363925 LCE2BO14633 110 aa6.68□□□□□ -1.34
RNU4-1-201ENST00000363925 CTSOP43234 321 aaPredicted RBP6.68□□□□□ -1.34
RNU4-1-201ENST00000363925 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.68□□□□□ -1.34
RNU4-1-201ENST00000363925 SPINT1O43278 529 aa6.67□□□□□ -1.34
RNU4-1-201ENST00000363925 TLR1Q15399 786 aa6.67□□□□□ -1.34
RNU4-1-201ENST00000363925 CCDC102BQ68D86 513 aa6.67□□□□□ -1.34
RNU4-1-201ENST00000363925 CNKSR1Q969H4 720 aa6.67□□□□□ -1.34
RNU4-1-201ENST00000363925 ETNK1Q9HBU6 452 aa6.67□□□□□ -1.34
RNU4-1-201ENST00000363925 USP17L15C9J2P7 530 aa6.66□□□□□ -1.34
RNU4-1-201ENST00000363925 USP17L10C9JJH3 530 aa6.66□□□□□ -1.34
RNU4-1-201ENST00000363925 USP17L13C9JLJ4 530 aa6.66□□□□□ -1.34
RNU4-1-201ENST00000363925 USP17L12C9JPN9 530 aa6.66□□□□□ -1.34
RNU4-1-201ENST00000363925 USP17L11C9JVI0 530 aa6.66□□□□□ -1.34
RNU4-1-201ENST00000363925 USP17L21D6R901 530 aa6.66□□□□□ -1.34
RNU4-1-201ENST00000363925 USP17L18D6R9N7 530 aa6.66□□□□□ -1.34
RNU4-1-201ENST00000363925 USP17L22D6RA61 530 aa6.66□□□□□ -1.34
RNU4-1-201ENST00000363925 USP17L17D6RBQ6 530 aa6.66□□□□□ -1.34
RNU4-1-201ENST00000363925 USP17L19D6RCP7 530 aa6.66□□□□□ -1.34
RNU4-1-201ENST00000363925 USP17L20D6RJB6 530 aa6.66□□□□□ -1.34
RNU4-1-201ENST00000363925 USP17L24Q0WX57 530 aa6.66□□□□□ -1.34
RNU4-1-201ENST00000363925 TMEM214Q6NUQ4 689 aaKnown RBP6.66□□□□□ -1.34
RNU4-1-201ENST00000363925 PRICKLE2Q7Z3G6 844 aa6.66□□□□□ -1.34
RNU4-1-201ENST00000363925 PCDHGA11Q9Y5H2 935 aa6.66□□□□□ -1.34
RNU4-1-201ENST00000363925 POTECB2RU33 542 aa6.65□□□□□ -1.34
RNU4-1-201ENST00000363925 BACH1O14867 736 aa6.65□□□□□ -1.34
RNU4-1-201ENST00000363925 LGR5O75473 907 aa6.65□□□□□ -1.34
RNU4-1-201ENST00000363925 IL2RAP01589 272 aa6.65□□□□□ -1.34
RNU4-1-201ENST00000363925 SNRPBP14678 240 aaKnown RBP6.65□□□□□ -1.34
RNU4-1-201ENST00000363925 RHOQP17081 205 aa6.65□□□□□ -1.34
RNU4-1-201ENST00000363925 CLDN10P78369 228 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms