RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 RHOQP17081 205 aa3.55□□□□□ -1.84
RNU6-228P-201ENST00000362700 CHSY3Q70JA7 882 aa3.55□□□□□ -1.84
RNU6-228P-201ENST00000362700 RETREG3Q86VR2 466 aa3.55□□□□□ -1.84
RNU6-228P-201ENST00000362700 TP53INP1Q96A56 240 aa3.55□□□□□ -1.84
RNU6-228P-201ENST00000362700 ARIH1Q9Y4X5 557 aaPredicted RBP3.55□□□□□ -1.84
RNU6-228P-201ENST00000362700 CD97P48960 835 aa3.54□□□□□ -1.84
RNU6-228P-201ENST00000362700 FOXD4L5Q5VV16 416 aaPredicted RBP3.54□□□□□ -1.84
RNU6-228P-201ENST00000362700 VASH1Q7L8A9 365 aaPredicted RBP3.54□□□□□ -1.84
RNU6-228P-201ENST00000362700 RNF135Q8IUD6 432 aa3.54□□□□□ -1.84
RNU6-228P-201ENST00000362700 GAS2L1Q99501 681 aaPredicted RBP3.54□□□□□ -1.84
RNU6-228P-201ENST00000362700 NUCKS1Q9H1E3 243 aaKnown RBP3.54□□□□□ -1.84
RNU6-228P-201ENST00000362700 ZNF395Q9H8N7 513 aaPredicted RBP3.54□□□□□ -1.84
RNU6-228P-201ENST00000362700 MAP4K5Q9Y4K4 846 aa3.54□□□□□ -1.84
RNU6-228P-201ENST00000362700 PPP1R26Q5T8A7 1209 aaPredicted RBP3.53□□□□□ -1.84
RNU6-228P-201ENST00000362700 PRICKLE2Q7Z3G6 844 aa3.53□□□□□ -1.84
RNU6-228P-201ENST00000362700 DYRK1BQ9Y463 629 aa3.53□□□□□ -1.84
RNU6-228P-201ENST00000362700 KDM4AO75164 1064 aa3.52□□□□□ -1.85
RNU6-228P-201ENST00000362700 BMP4P12644 408 aa3.52□□□□□ -1.85
RNU6-228P-201ENST00000362700 SYMPKQ92797 1274 aaKnown RBP3.52□□□□□ -1.85
RNU6-228P-201ENST00000362700 HLA-CQ95604 372 aa3.52□□□□□ -1.85
RNU6-228P-201ENST00000362700 USP46P62068 366 aa3.51□□□□□ -1.85
RNU6-228P-201ENST00000362700 BPHLQ86WA6 291 aaPredicted RBP3.51□□□□□ -1.85
RNU6-228P-201ENST00000362700 LSRQ86X29 649 aaPredicted RBP3.51□□□□□ -1.85
RNU6-228P-201ENST00000362700 MICALL1Q8N3F8 863 aa3.51□□□□□ -1.85
RNU6-228P-201ENST00000362700 NUTM2FA1L443 756 aa3.5□□□□□ -1.85
RNU6-228P-201ENST00000362700 C9orf172C9J069 976 aa3.5□□□□□ -1.85
RNU6-228P-201ENST00000362700 TXNRD3Q86VQ6 643 aa3.5□□□□□ -1.85
RNU6-228P-201ENST00000362700 NEURL1BA8MQ27 555 aa3.49□□□□□ -1.85
RNU6-228P-201ENST00000362700 E2F4Q16254 413 aa3.49□□□□□ -1.85
RNU6-228P-201ENST00000362700 ASIC4Q96FT7 647 aa3.49□□□□□ -1.85
RNU6-228P-201ENST00000362700 CTHP32929 405 aa3.48□□□□□ -1.85
RNU6-228P-201ENST00000362700 TRIM28Q13263 835 aaKnown RBP3.48□□□□□ -1.85
RNU6-228P-201ENST00000362700 ADGRE1Q14246 886 aa3.48□□□□□ -1.85
RNU6-228P-201ENST00000362700 MBTPS1Q14703 1052 aa3.48□□□□□ -1.85
RNU6-228P-201ENST00000362700 C4orf48Q5BLP8 95 aa3.48□□□□□ -1.85
RNU6-228P-201ENST00000362700 NLRP7Q8WX94 980 aa3.48□□□□□ -1.85
RNU6-228P-201ENST00000362700 KIAA1324LA8MWY0 1029 aaPredicted RBP3.47□□□□□ -1.85
RNU6-228P-201ENST00000362700 FAM229AH3BQW9 127 aa3.47□□□□□ -1.85
RNU6-228P-201ENST00000362700 ARAFP10398 606 aa3.47□□□□□ -1.85
RNU6-228P-201ENST00000362700 GRIK4Q16099 956 aa3.47□□□□□ -1.85
RNU6-228P-201ENST00000362700 KRTAP19-4Q3LI73 84 aa3.47□□□□□ -1.85
RNU6-228P-201ENST00000362700 SLC51AQ86UW1 340 aa3.47□□□□□ -1.85
RNU6-228P-201ENST00000362700 ADGRE2Q9UHX3 823 aa3.47□□□□□ -1.85
RNU6-228P-201ENST00000362700 HOXA2O43364 376 aa3.46□□□□□ -1.86
RNU6-228P-201ENST00000362700 GUCA2AQ02747 115 aa3.46□□□□□ -1.86
RNU6-228P-201ENST00000362700 WDR26Q9H7D7 661 aa3.46□□□□□ -1.86
RNU6-228P-201ENST00000362700 C2CD2LO14523 706 aa3.45□□□□□ -1.86
RNU6-228P-201ENST00000362700 DHX9Q08211 1270 aaKnown RBP3.45□□□□□ -1.86
RNU6-228P-201ENST00000362700 ZNF124Q15973 351 aa3.45□□□□□ -1.86
RNU6-228P-201ENST00000362700 PAXIP1Q6ZW49 1069 aaPredicted RBP3.45□□□□□ -1.86
RNU6-228P-201ENST00000362700 C1QTNF2Q9BXJ5 285 aa3.45□□□□□ -1.86
RNU6-228P-201ENST00000362700 KDM2AQ9Y2K7 1162 aa3.45□□□□□ -1.86
RNU6-228P-201ENST00000362700 C6orf229H3BNL8 230 aa3.44□□□□□ -1.86
RNU6-228P-201ENST00000362700 RNF144AP50876 292 aaPredicted RBP3.44□□□□□ -1.86
RNU6-228P-201ENST00000362700 NRG1Q02297 640 aaPredicted RBP3.44□□□□□ -1.86
RNU6-228P-201ENST00000362700 TRMT44Q8IYL2 757 aaKnown RBP3.44□□□□□ -1.86
RNU6-228P-201ENST00000362700 F11P03951 625 aa3.43□□□□□ -1.86
RNU6-228P-201ENST00000362700 CD46P15529 392 aa3.43□□□□□ -1.86
RNU6-228P-201ENST00000362700 PKN1Q16512 942 aa3.43□□□□□ -1.86
RNU6-228P-201ENST00000362700 ZNF648Q5T619 568 aaPredicted RBP3.43□□□□□ -1.86
RNU6-228P-201ENST00000362700 ATXN7L1Q9ULK2 861 aaPredicted RBP3.43□□□□□ -1.86
RNU6-228P-201ENST00000362700 MED26O95402 600 aa3.42□□□□□ -1.86
RNU6-228P-201ENST00000362700 ADH1AP07327 375 aa3.42□□□□□ -1.86
RNU6-228P-201ENST00000362700 FGFR3P22607 806 aa3.42□□□□□ -1.86
RNU6-228P-201ENST00000362700 ADH6P28332 368 aa3.42□□□□□ -1.86
RNU6-228P-201ENST00000362700 PTGIRP43119 386 aa3.42□□□□□ -1.86
RNU6-228P-201ENST00000362700 SSBP4Q9BWG4 385 aaPredicted RBP3.42□□□□□ -1.86
RNU6-228P-201ENST00000362700 ADAMTS4O75173 837 aa3.4□□□□□ -1.87
RNU6-228P-201ENST00000362700 FSTP19883 344 aa3.4□□□□□ -1.87
RNU6-228P-201ENST00000362700 CTBSQ01459 385 aa3.4□□□□□ -1.87
RNU6-228P-201ENST00000362700 DBX2Q6ZNG2 339 aa3.4□□□□□ -1.87
RNU6-228P-201ENST00000362700 WNT11O96014 354 aa3.39□□□□□ -1.87
RNU6-228P-201ENST00000362700 IGHA2P01877 340 aa3.39□□□□□ -1.87
RNU6-228P-201ENST00000362700 POU4F2Q12837 409 aa3.39□□□□□ -1.87
RNU6-228P-201ENST00000362700 TIMMDC1Q9NPL8 285 aa3.39□□□□□ -1.87
RNU6-228P-201ENST00000362700 MAGEB6P1A0A0J9YX57 407 aa3.38□□□□□ -1.87
RNU6-228P-201ENST00000362700 THBS1P07996 1170 aa3.38□□□□□ -1.87
RNU6-228P-201ENST00000362700 SELPP16109 830 aa3.38□□□□□ -1.87
RNU6-228P-201ENST00000362700 DESI1Q6ICB0 168 aa3.38□□□□□ -1.87
RNU6-228P-201ENST00000362700 PRR23CQ6ZRP0 262 aa3.38□□□□□ -1.87
RNU6-228P-201ENST00000362700 LENG1Q96BZ8 264 aaPredicted RBP3.38□□□□□ -1.87
RNU6-228P-201ENST00000362700 ABHD17AQ96GS6 310 aa3.38□□□□□ -1.87
RNU6-228P-201ENST00000362700 AVENQ9NQS1 362 aaPredicted RBP3.38□□□□□ -1.87
RNU6-228P-201ENST00000362700 GPC1P35052 558 aa3.37□□□□□ -1.87
RNU6-228P-201ENST00000362700 MLLT3P42568 568 aaPredicted RBP3.37□□□□□ -1.87
RNU6-228P-201ENST00000362700 RGS19P49795 217 aa3.37□□□□□ -1.87
RNU6-228P-201ENST00000362700 HIC1Q14526 733 aa3.37□□□□□ -1.87
RNU6-228P-201ENST00000362700 NBPF14Q5TI25 921 aa3.37□□□□□ -1.87
RNU6-228P-201ENST00000362700 NBPF10Q6P3W6 841 aaKnown RBP3.37□□□□□ -1.87
RNU6-228P-201ENST00000362700 FCHSD1Q86WN1 690 aa3.37□□□□□ -1.87
RNU6-228P-201ENST00000362700 ZDHHC13Q8IUH4 622 aa3.37□□□□□ -1.87
RNU6-228P-201ENST00000362700 NBPF15Q8N660 670 aa3.37□□□□□ -1.87
RNU6-228P-201ENST00000362700 PRR7Q8TB68 274 aa3.37□□□□□ -1.87
RNU6-228P-201ENST00000362700 USP21Q9UK80 565 aa3.37□□□□□ -1.87
RNU6-228P-201ENST00000362700 ATP5J2-PTCD1G3V325 749 aa3.36□□□□□ -1.87
RNU6-228P-201ENST00000362700 PTCD1O75127 700 aaKnown RBP3.36□□□□□ -1.87
RNU6-228P-201ENST00000362700 SPINK2P20155 84 aa3.36□□□□□ -1.87
RNU6-228P-201ENST00000362700 GRIK1P39086 918 aa3.36□□□□□ -1.87
RNU6-228P-201ENST00000362700 LBRQ14739 615 aaKnown RBP3.36□□□□□ -1.87
RNU6-228P-201ENST00000362700 WDR44Q5JSH3 913 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms