RNA–Protein interactions for RNA: ENST00000361987.5

CNTF-201, Transcript of ciliary neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTF, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTF-201ENST00000361987 DDX54Q8TDD1 881 aaKnown RBP16.78■□□□□ 0.28
CNTF-201ENST00000361987 KDRP35968 1356 aa16.77■□□□□ 0.28
CNTF-201ENST00000361987 RGPD1P0DJD0 1748 aa16.77■□□□□ 0.27
CNTF-201ENST00000361987 PRKAR2BP31323 418 aa16.76■□□□□ 0.27
CNTF-201ENST00000361987 FAM182BQ5T319 152 aa16.76■□□□□ 0.27
CNTF-201ENST00000361987 ILDR2Q71H61 639 aa16.76■□□□□ 0.27
CNTF-201ENST00000361987 RSPH6AQ9H0K4 717 aa16.76■□□□□ 0.27
CNTF-201ENST00000361987 ADAMTS8Q9UP79 889 aa16.76■□□□□ 0.27
CNTF-201ENST00000361987 SPG7Q9UQ90 795 aa16.76■□□□□ 0.27
CNTF-201ENST00000361987 THSD7AQ9UPZ6 1657 aa16.75■□□□□ 0.27
CNTF-201ENST00000361987 OVOS2A0A0G2JMS6 1433 aa16.75■□□□□ 0.27
CNTF-201ENST00000361987 PLEKHO1Q53GL0 409 aaPredicted RBP16.75■□□□□ 0.27
CNTF-201ENST00000361987 AMOTQ4VCS5 1084 aa16.74■□□□□ 0.27
CNTF-201ENST00000361987 MARCH10Q8NA82 808 aaPredicted RBP16.73■□□□□ 0.27
CNTF-201ENST00000361987 PNISRQ8TF01 805 aaKnown RBP16.73■□□□□ 0.27
CNTF-201ENST00000361987 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.73■□□□□ 0.27
CNTF-201ENST00000361987 CCER2I3L3R5 266 aa16.73■□□□□ 0.27
CNTF-201ENST00000361987 NEFMP07197 916 aa16.73■□□□□ 0.27
CNTF-201ENST00000361987 PHACTR3Q96KR7 559 aa16.73■□□□□ 0.27
CNTF-201ENST00000361987 PNNQ9H307 717 aaKnown RBP16.73■□□□□ 0.27
CNTF-201ENST00000361987 PARP4Q9UKK3 1724 aaKnown RBP16.72■□□□□ 0.27
CNTF-201ENST00000361987 TNS2Q63HR2 1409 aa16.72■□□□□ 0.27
CNTF-201ENST00000361987 PCDH11XQ9BZA7 1347 aa16.72■□□□□ 0.27
CNTF-201ENST00000361987 PCDH11YQ9BZA8 1340 aa16.72■□□□□ 0.27
CNTF-201ENST00000361987 WNK3Q9BYP7 1800 aa16.72■□□□□ 0.27
CNTF-201ENST00000361987 FAM9BQ8IZU0 186 aa16.71■□□□□ 0.27
CNTF-201ENST00000361987 BRWD3Q6RI45 1802 aa16.71■□□□□ 0.27
CNTF-201ENST00000361987 CYP27B1O15528 508 aa16.71■□□□□ 0.27
CNTF-201ENST00000361987 MTHFSDQ2M296 383 aaKnown RBP16.71■□□□□ 0.27
CNTF-201ENST00000361987 ZNF530Q6P9A1 599 aaPredicted RBP16.71■□□□□ 0.27
CNTF-201ENST00000361987 CCDC146Q8IYE0 955 aa16.71■□□□□ 0.27
CNTF-201ENST00000361987 LRRC37A3O60309 1634 aa16.71■□□□□ 0.26
CNTF-201ENST00000361987 PLEKHF1Q96S99 279 aa16.7■□□□□ 0.26
CNTF-201ENST00000361987 C1orf141Q5JVX7 400 aa16.69■□□□□ 0.26
CNTF-201ENST00000361987 IFNL2Q8IZJ0 200 aa16.69■□□□□ 0.26
CNTF-201ENST00000361987 EP400Q96L91 3159 aa16.69■□□□□ 0.26
CNTF-201ENST00000361987 FAM196AQ6ZSG2 479 aa16.69■□□□□ 0.26
CNTF-201ENST00000361987 MAPK8IP3Q9UPT6 1336 aa16.69■□□□□ 0.26
CNTF-201ENST00000361987 PHKG2P15735 406 aa16.68■□□□□ 0.26
CNTF-201ENST00000361987 PLEKHG2Q9H7P9 1386 aa16.68■□□□□ 0.26
CNTF-201ENST00000361987 GAS2L2Q8NHY3 880 aa16.67■□□□□ 0.26
CNTF-201ENST00000361987 RUNDC1Q96C34 613 aa16.67■□□□□ 0.26
CNTF-201ENST00000361987 KAT6BQ8WYB5 2073 aa16.66■□□□□ 0.26
CNTF-201ENST00000361987 AKAP4Q5JQC9 854 aa16.65■□□□□ 0.26
CNTF-201ENST00000361987 ACSBG1Q96GR2 724 aa16.65■□□□□ 0.26
CNTF-201ENST00000361987 MPRIPQ6WCQ1 1025 aa16.65■□□□□ 0.26
CNTF-201ENST00000361987 PKD1L3Q7Z443 1732 aa16.65■□□□□ 0.26
CNTF-201ENST00000361987 SYTL4Q96C24 671 aaPredicted RBP16.65■□□□□ 0.26
CNTF-201ENST00000361987 HSP90AB1P08238 724 aaKnown RBP16.64■□□□□ 0.25
CNTF-201ENST00000361987 NEUROD2Q15784 382 aa16.64■□□□□ 0.25
CNTF-201ENST00000361987 GNAT3A8MTJ3 354 aa16.63■□□□□ 0.25
CNTF-201ENST00000361987 TRIM37O94972 964 aa16.63■□□□□ 0.25
CNTF-201ENST00000361987 NKX1-1Q15270 411 aaPredicted RBP16.63■□□□□ 0.25
CNTF-201ENST00000361987 SHANK3Q9BYB0 1731 aa16.63■□□□□ 0.25
CNTF-201ENST00000361987 DCAF5Q96JK2 942 aa16.63■□□□□ 0.25
CNTF-201ENST00000361987 RRP7AQ9Y3A4 280 aaKnown RBP16.63■□□□□ 0.25
CNTF-201ENST00000361987 SENP3-EIF4A1A0A087X0R7 540 aa16.62■□□□□ 0.25
CNTF-201ENST00000361987 APAF1O14727 1248 aa16.62■□□□□ 0.25
CNTF-201ENST00000361987 KCNQ2O43526 872 aa16.62■□□□□ 0.25
CNTF-201ENST00000361987 PRIM1P49642 420 aaKnown RBP16.62■□□□□ 0.25
CNTF-201ENST00000361987 NFE2L2Q16236 605 aa16.62■□□□□ 0.25
CNTF-201ENST00000361987 TMPOP42166 694 aaKnown RBP16.61■□□□□ 0.25
CNTF-201ENST00000361987 RIPK4P57078 832 aa16.61■□□□□ 0.25
CNTF-201ENST00000361987 RTF1Q92541 710 aaKnown RBP16.61■□□□□ 0.25
CNTF-201ENST00000361987 LGR6Q9HBX8 967 aa16.61■□□□□ 0.25
CNTF-201ENST00000361987 MAP3K5Q99683 1374 aa16.6■□□□□ 0.25
CNTF-201ENST00000361987 PTF1AQ7RTS3 328 aa16.6■□□□□ 0.25
CNTF-201ENST00000361987 BCL9O00512 1426 aa16.6■□□□□ 0.25
CNTF-201ENST00000361987 RNMTO43148 476 aaKnown RBP16.59■□□□□ 0.25
CNTF-201ENST00000361987 DCTN1Q14203 1278 aa16.59■□□□□ 0.25
CNTF-201ENST00000361987 MCM10Q7L590 875 aa16.59■□□□□ 0.25
CNTF-201ENST00000361987 IL17REQ8NFR9 667 aa16.59■□□□□ 0.25
CNTF-201ENST00000361987 BCL11BQ9C0K0 894 aaPredicted RBP16.59■□□□□ 0.25
CNTF-201ENST00000361987 ERVV-2B6SEH9 535 aa16.58■□□□□ 0.24
CNTF-201ENST00000361987 CABP4P57796 275 aa16.58■□□□□ 0.24
CNTF-201ENST00000361987 KDM6AO15550 1401 aaPredicted RBP16.57■□□□□ 0.24
CNTF-201ENST00000361987 HTATSF1O43719 755 aaKnown RBP16.57■□□□□ 0.24
CNTF-201ENST00000361987 SF3B2Q13435 895 aaKnown RBP16.57■□□□□ 0.24
CNTF-201ENST00000361987 NFATC2IPQ8NCF5 419 aa16.57■□□□□ 0.24
CNTF-201ENST00000361987 TMOD3Q9NYL9 352 aa16.57■□□□□ 0.24
CNTF-201ENST00000361987 SALL2Q9Y467 1007 aaPredicted RBP16.56■□□□□ 0.24
CNTF-201ENST00000361987 PIGBQ92521 554 aa16.56■□□□□ 0.24
CNTF-201ENST00000361987 UPF1Q92900 1129 aaKnown RBP eCLIP16.56■□□□□ 0.24
CNTF-201ENST00000361987 APBA3O96018 575 aa16.55■□□□□ 0.24
CNTF-201ENST00000361987 TEFQ10587 303 aa16.55■□□□□ 0.24
CNTF-201ENST00000361987 CCDC125Q86Z20 511 aa16.55■□□□□ 0.24
CNTF-201ENST00000361987 LMOD3Q0VAK6 560 aa16.54■□□□□ 0.24
CNTF-201ENST00000361987 THUMPD2Q9BTF0 503 aaKnown RBP16.54■□□□□ 0.24
CNTF-201ENST00000361987 SLC52A2Q9HAB3 445 aa16.54■□□□□ 0.24
CNTF-201ENST00000361987 TRIM35Q9UPQ4 493 aa16.54■□□□□ 0.24
CNTF-201ENST00000361987 SBF2Q86WG5 1849 aa16.53■□□□□ 0.24
CNTF-201ENST00000361987 DOT1LQ8TEK3 1739 aa16.53■□□□□ 0.24
CNTF-201ENST00000361987 DLG5Q8TDM6 1919 aa16.52■□□□□ 0.24
CNTF-201ENST00000361987 CEMIPQ8WUJ3 1361 aa16.52■□□□□ 0.24
CNTF-201ENST00000361987 TOGARAM1Q9Y4F4 1720 aa16.51■□□□□ 0.23
CNTF-201ENST00000361987 ASAP1Q9ULH1 1129 aa16.51■□□□□ 0.23
CNTF-201ENST00000361987 SCN11AQ9UI33 1791 aa16.5■□□□□ 0.23
CNTF-201ENST00000361987 BAG6P46379 1132 aa16.5■□□□□ 0.23
CNTF-201ENST00000361987 DEFB132Q7Z7B7 95 aa16.5■□□□□ 0.23
CNTF-201ENST00000361987 BTBD11A6QL63 1104 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms