RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 PRIMPOLQ96LW4 560 aa8.45□□□□□ -1.06
RPL39-201ENST00000361575 CXXC1Q9P0U4 656 aaPredicted RBP8.45□□□□□ -1.06
RPL39-201ENST00000361575 RNF223E7ERA6 249 aa8.44□□□□□ -1.06
RPL39-201ENST00000361575 TAS1R3Q7RTX0 852 aa8.44□□□□□ -1.06
RPL39-201ENST00000361575 SEPT12Q8IYM1 358 aa8.44□□□□□ -1.06
RPL39-201ENST00000361575 TRIM32Q13049 653 aa8.43□□□□□ -1.06
RPL39-201ENST00000361575 CDAN1Q8IWY9 1227 aa8.43□□□□□ -1.06
RPL39-201ENST00000361575 KCTD15Q96SI1 283 aaPredicted RBP8.43□□□□□ -1.06
RPL39-201ENST00000361575 AMOTL2Q9Y2J4 779 aa8.43□□□□□ -1.06
RPL39-201ENST00000361575 ITGBL1O95965 494 aaPredicted RBP8.42□□□□□ -1.06
RPL39-201ENST00000361575 USP4Q13107 963 aa8.42□□□□□ -1.06
RPL39-201ENST00000361575 INTS6LQ5JSJ4 861 aaKnown RBP8.42□□□□□ -1.06
RPL39-201ENST00000361575 PURBQ96QR8 312 aaKnown RBP8.42□□□□□ -1.06
RPL39-201ENST00000361575 CDV3Q9UKY7 258 aaKnown RBP8.42□□□□□ -1.06
RPL39-201ENST00000361575 ERVH48-1M5A8F1 160 aa8.41□□□□□ -1.06
RPL39-201ENST00000361575 RAB15P59190 212 aa8.41□□□□□ -1.06
RPL39-201ENST00000361575 TSEN2Q8NCE0 465 aaKnown RBP8.41□□□□□ -1.06
RPL39-201ENST00000361575 MAP4K5Q9Y4K4 846 aa8.41□□□□□ -1.06
RPL39-201ENST00000361575 STAU1O95793 577 aaKnown RBP8.4□□□□□ -1.06
RPL39-201ENST00000361575 WEE1P30291 646 aa8.4□□□□□ -1.06
RPL39-201ENST00000361575 PSME1Q06323 249 aa8.4□□□□□ -1.06
RPL39-201ENST00000361575 CAPN12Q6ZSI9 719 aa8.4□□□□□ -1.06
RPL39-201ENST00000361575 ANKLE1Q8NAG6 615 aa8.4□□□□□ -1.06
RPL39-201ENST00000361575 UNCXA6NJT0 531 aa8.39□□□□□ -1.07
RPL39-201ENST00000361575 TMEM229AB2RXF0 380 aa8.39□□□□□ -1.07
RPL39-201ENST00000361575 VARSP26640 1264 aaKnown RBP8.39□□□□□ -1.07
RPL39-201ENST00000361575 WNT7BP56706 349 aa8.39□□□□□ -1.07
RPL39-201ENST00000361575 ECM1Q16610 540 aa8.39□□□□□ -1.07
RPL39-201ENST00000361575 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.39□□□□□ -1.07
RPL39-201ENST00000361575 GAS2L2Q8NHY3 880 aa8.39□□□□□ -1.07
RPL39-201ENST00000361575 SIRT1Q96EB6 747 aa8.39□□□□□ -1.07
RPL39-201ENST00000361575 M0R2N6 131 aa8.38□□□□□ -1.07
RPL39-201ENST00000361575 SCNN1DP51172 638 aa8.38□□□□□ -1.07
RPL39-201ENST00000361575 ERVK-9P63128 1117 aa8.38□□□□□ -1.07
RPL39-201ENST00000361575 ZNF211Q13398 564 aaPredicted RBP8.38□□□□□ -1.07
RPL39-201ENST00000361575 FKBP5Q13451 457 aaPredicted RBP8.38□□□□□ -1.07
RPL39-201ENST00000361575 CCDC125Q86Z20 511 aa8.38□□□□□ -1.07
RPL39-201ENST00000361575 EMID1Q96A84 441 aaPredicted RBP8.38□□□□□ -1.07
RPL39-201ENST00000361575 ZNF358Q9NW07 568 aa8.38□□□□□ -1.07
RPL39-201ENST00000361575 SEPT3Q9UH03 358 aa8.38□□□□□ -1.07
RPL39-201ENST00000361575 KCNC4Q03721 635 aa8.37□□□□□ -1.07
RPL39-201ENST00000361575 POTEGQ6S5H5 508 aa8.37□□□□□ -1.07
RPL39-201ENST00000361575 VASH1Q7L8A9 365 aaPredicted RBP8.37□□□□□ -1.07
RPL39-201ENST00000361575 OSBPL3Q9H4L5 887 aa8.37□□□□□ -1.07
RPL39-201ENST00000361575 TMPRSS4Q9NRS4 437 aa8.37□□□□□ -1.07
RPL39-201ENST00000361575 EGFL7Q9UHF1 273 aa8.37□□□□□ -1.07
RPL39-201ENST00000361575 ZBTB24O43167 697 aaPredicted RBP8.36□□□□□ -1.07
RPL39-201ENST00000361575 GRM5P41594 1212 aa8.36□□□□□ -1.07
RPL39-201ENST00000361575 CDK15Q96Q40 435 aa8.36□□□□□ -1.07
RPL39-201ENST00000361575 HINFPQ9BQA5 517 aa8.36□□□□□ -1.07
RPL39-201ENST00000361575 ANO2Q9NQ90 1003 aa8.36□□□□□ -1.07
RPL39-201ENST00000361575 RBM19Q9Y4C8 960 aaKnown RBP8.36□□□□□ -1.07
RPL39-201ENST00000361575 RBM47A0AV96 593 aaKnown RBP8.35□□□□□ -1.07
RPL39-201ENST00000361575 EPHA4P54764 986 aa8.35□□□□□ -1.07
RPL39-201ENST00000361575 MKNK1Q9BUB5 465 aa8.35□□□□□ -1.07
RPL39-201ENST00000361575 DNMT3AQ9Y6K1 912 aaPredicted RBP8.35□□□□□ -1.07
RPL39-201ENST00000361575 TLL2Q9Y6L7 1015 aa8.35□□□□□ -1.07
RPL39-201ENST00000361575 ICMTO60725 284 aa8.34□□□□□ -1.07
RPL39-201ENST00000361575 ABL1P00519 1130 aa8.34□□□□□ -1.07
RPL39-201ENST00000361575 MYCP01106 439 aaPredicted RBP8.34□□□□□ -1.07
RPL39-201ENST00000361575 CC2D2BQ6DHV5 1058 aa8.34□□□□□ -1.07
RPL39-201ENST00000361575 PPP1R18Q6NYC8 613 aa8.34□□□□□ -1.07
RPL39-201ENST00000361575 GTF3C2Q8WUA4 911 aaPredicted RBP8.34□□□□□ -1.07
RPL39-201ENST00000361575 E9PSI1 815 aa8.33□□□□□ -1.08
RPL39-201ENST00000361575 H3BRB1 525 aa8.33□□□□□ -1.08
RPL39-201ENST00000361575 SIAH2O43255 324 aa8.33□□□□□ -1.08
RPL39-201ENST00000361575 C21orf2O43822 256 aa8.33□□□□□ -1.08
RPL39-201ENST00000361575 LILRA1O75019 489 aa8.33□□□□□ -1.08
RPL39-201ENST00000361575 FSHRP23945 695 aa8.33□□□□□ -1.08
RPL39-201ENST00000361575 RPIAP49247 311 aa8.33□□□□□ -1.08
RPL39-201ENST00000361575 MARSP56192 900 aaKnown RBP8.33□□□□□ -1.08
RPL39-201ENST00000361575 MTMR3Q13615 1198 aa8.33□□□□□ -1.08
RPL39-201ENST00000361575 RC3H1Q5TC82 1133 aaKnown RBP8.33□□□□□ -1.08
RPL39-201ENST00000361575 ZNF784Q8NCA9 323 aaPredicted RBP8.33□□□□□ -1.08
RPL39-201ENST00000361575 EHBP1Q8NDI1 1231 aa8.33□□□□□ -1.08
RPL39-201ENST00000361575 TUT1Q9H6E5 874 aaKnown RBP8.33□□□□□ -1.08
RPL39-201ENST00000361575 CYLDQ9NQC7 956 aa8.33□□□□□ -1.08
RPL39-201ENST00000361575 WASLO00401 505 aaPredicted RBP8.32□□□□□ -1.08
RPL39-201ENST00000361575 GDF10P55107 478 aa8.32□□□□□ -1.08
RPL39-201ENST00000361575 ARID5BQ14865 1188 aa8.32□□□□□ -1.08
RPL39-201ENST00000361575 LIAT1Q6ZQX7 453 aa8.32□□□□□ -1.08
RPL39-201ENST00000361575 NPAS4Q8IUM7 802 aa8.32□□□□□ -1.08
RPL39-201ENST00000361575 TNS4Q8IZW8 715 aa8.32□□□□□ -1.08
RPL39-201ENST00000361575 ETNK1Q9HBU6 452 aa8.32□□□□□ -1.08
RPL39-201ENST00000361575 BIN2Q9UBW5 565 aaPredicted RBP8.32□□□□□ -1.08
RPL39-201ENST00000361575 ARHGAP4P98171 946 aa8.31□□□□□ -1.08
RPL39-201ENST00000361575 MPNDQ8N594 471 aa8.31□□□□□ -1.08
RPL39-201ENST00000361575 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.31□□□□□ -1.08
RPL39-201ENST00000361575 HCSTQ9UBK5 93 aa8.31□□□□□ -1.08
RPL39-201ENST00000361575 NR3C2P08235 984 aa8.3□□□□□ -1.08
RPL39-201ENST00000361575 ERCC3P19447 782 aa8.3□□□□□ -1.08
RPL39-201ENST00000361575 IGFBP4P22692 258 aa8.3□□□□□ -1.08
RPL39-201ENST00000361575 KIAA1522Q9P206 1035 aaPredicted RBP8.3□□□□□ -1.08
RPL39-201ENST00000361575 INHAP05111 366 aa8.29□□□□□ -1.08
RPL39-201ENST00000361575 ADD1P35611 737 aaKnown RBP8.29□□□□□ -1.08
RPL39-201ENST00000361575 COL26A1Q96A83 441 aa8.29□□□□□ -1.08
RPL39-201ENST00000361575 TSPAN10Q9H1Z9 355 aaPredicted RBP8.29□□□□□ -1.08
RPL39-201ENST00000361575 ANKRD33BA6NCL7 494 aa8.28□□□□□ -1.08
RPL39-201ENST00000361575 ADH1CP00326 375 aa8.28□□□□□ -1.08
RPL39-201ENST00000361575 ZNF16P17020 682 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms