RNA–Protein interactions for RNA: ENST00000360859.10

COL9A1-203, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-203ENST00000360859 GGNBP2Q9H3C7 697 aa24.35■■□□□ 1.49
COL9A1-203ENST00000360859 DOT1LQ8TEK3 1739 aa24.33■■□□□ 1.49
COL9A1-203ENST00000360859 SHANK3Q9BYB0 1731 aa24.33■■□□□ 1.49
COL9A1-203ENST00000360859 NSD2O96028 1365 aa24.33■■□□□ 1.49
COL9A1-203ENST00000360859 KCNQ4P56696 695 aa24.33■■□□□ 1.49
COL9A1-203ENST00000360859 NBPF6Q5VWK0 638 aa24.33■■□□□ 1.49
COL9A1-203ENST00000360859 NBPF4Q96M43 638 aa24.33■■□□□ 1.49
COL9A1-203ENST00000360859 SLC16A10Q8TF71 515 aa24.31■■□□□ 1.48
COL9A1-203ENST00000360859 MAP3K5Q99683 1374 aa24.3■■□□□ 1.48
COL9A1-203ENST00000360859 USHBP1Q8N6Y0 703 aa24.3■■□□□ 1.48
COL9A1-203ENST00000360859 PNPLA7Q6ZV29 1317 aa24.3■■□□□ 1.48
COL9A1-203ENST00000360859 QSER1Q2KHR3 1735 aa24.3■■□□□ 1.48
COL9A1-203ENST00000360859 TFCP2L1Q9NZI6 479 aa24.29■■□□□ 1.48
COL9A1-203ENST00000360859 CGNL1Q0VF96 1302 aa24.29■■□□□ 1.48
COL9A1-203ENST00000360859 SMG6Q86US8 1419 aaKnown RBP24.28■■□□□ 1.48
COL9A1-203ENST00000360859 LY75O60449 1722 aa24.27■■□□□ 1.48
COL9A1-203ENST00000360859 TRIM26Q12899 539 aaPredicted RBP24.27■■□□□ 1.48
COL9A1-203ENST00000360859 CDCA8Q53HL2 280 aa24.27■■□□□ 1.48
COL9A1-203ENST00000360859 HSP90AB2PQ58FF8 381 aa24.27■■□□□ 1.48
COL9A1-203ENST00000360859 RAPGEF4Q8WZA2 1011 aa24.27■■□□□ 1.48
COL9A1-203ENST00000360859 INSRP06213 1382 aa24.27■■□□□ 1.48
COL9A1-203ENST00000360859 CCNL1Q9UK58 526 aaPredicted RBP24.25■■□□□ 1.47
COL9A1-203ENST00000360859 TUBGCP6Q96RT7 1819 aa24.24■■□□□ 1.47
COL9A1-203ENST00000360859 TATP17735 454 aaPredicted RBP24.24■■□□□ 1.47
COL9A1-203ENST00000360859 POLD1P28340 1107 aa24.24■■□□□ 1.47
COL9A1-203ENST00000360859 ZNF784Q8NCA9 323 aaPredicted RBP24.24■■□□□ 1.47
COL9A1-203ENST00000360859 CARD14Q9BXL6 1004 aa24.24■■□□□ 1.47
COL9A1-203ENST00000360859 FLT4P35916 1363 aa24.24■■□□□ 1.47
COL9A1-203ENST00000360859 KIF20BQ96Q89 1820 aa24.24■■□□□ 1.47
COL9A1-203ENST00000360859 COL24A1Q17RW2 1714 aa24.23■■□□□ 1.47
COL9A1-203ENST00000360859 KIF24Q5T7B8 1368 aa24.22■■□□□ 1.47
COL9A1-203ENST00000360859 UTRNP46939 3433 aa24.22■■□□□ 1.47
COL9A1-203ENST00000360859 KLHL34Q8N239 644 aa24.21■■□□□ 1.47
COL9A1-203ENST00000360859 PCDH11XQ9BZA7 1347 aa24.2■■□□□ 1.46
COL9A1-203ENST00000360859 PCDH11YQ9BZA8 1340 aa24.2■■□□□ 1.46
COL9A1-203ENST00000360859 GPR162Q16538 588 aa24.19■■□□□ 1.46
COL9A1-203ENST00000360859 NSD3Q9BZ95 1437 aa24.18■■□□□ 1.46
COL9A1-203ENST00000360859 EMILIN1Q9Y6C2 1016 aa24.18■■□□□ 1.46
COL9A1-203ENST00000360859 COL23A1Q86Y22 540 aaPredicted RBP24.17■■□□□ 1.46
COL9A1-203ENST00000360859 CHD4Q14839 1912 aa24.17■■□□□ 1.46
COL9A1-203ENST00000360859 CYP27B1O15528 508 aa24.16■■□□□ 1.46
COL9A1-203ENST00000360859 MSH5O43196 834 aa24.16■■□□□ 1.46
COL9A1-203ENST00000360859 MPRIPQ6WCQ1 1025 aa24.14■■□□□ 1.45
COL9A1-203ENST00000360859 NLGN2Q8NFZ4 835 aa24.14■■□□□ 1.45
COL9A1-203ENST00000360859 PALLDQ8WX93 1383 aa24.13■■□□□ 1.45
COL9A1-203ENST00000360859 PPM1GO15355 546 aaPredicted RBP24.12■■□□□ 1.45
COL9A1-203ENST00000360859 PELP1Q8IZL8 1130 aaKnown RBP24.12■■□□□ 1.45
COL9A1-203ENST00000360859 TIMELESSQ9UNS1 1208 aa24.12■■□□□ 1.45
COL9A1-203ENST00000360859 C5P01031 1676 aa24.11■■□□□ 1.45
COL9A1-203ENST00000360859 NCAPD2Q15021 1401 aa24.11■■□□□ 1.45
COL9A1-203ENST00000360859 PKD1L3Q7Z443 1732 aa24.1■■□□□ 1.45
COL9A1-203ENST00000360859 MSL1Q68DK7 614 aa24.1■■□□□ 1.45
COL9A1-203ENST00000360859 TOGARAM1Q9Y4F4 1720 aa24.1■■□□□ 1.45
COL9A1-203ENST00000360859 HMGB2P26583 209 aaKnown RBP24.09■■□□□ 1.45
COL9A1-203ENST00000360859 ANKRD26Q9UPS8 1709 aa24.09■■□□□ 1.45
COL9A1-203ENST00000360859 WASHC2AQ641Q2 1341 aa24.09■■□□□ 1.45
COL9A1-203ENST00000360859 NKX1-1Q15270 411 aaPredicted RBP24.08■■□□□ 1.45
COL9A1-203ENST00000360859 SMARCC1Q92922 1105 aaPredicted RBP24.08■■□□□ 1.45
COL9A1-203ENST00000360859 FLAD1Q8NFF5 587 aa24.07■■□□□ 1.44
COL9A1-203ENST00000360859 PIGBQ92521 554 aa24.07■■□□□ 1.44
COL9A1-203ENST00000360859 SPG7Q9UQ90 795 aa24.07■■□□□ 1.44
COL9A1-203ENST00000360859 ITGB4P16144 1822 aa24.07■■□□□ 1.44
COL9A1-203ENST00000360859 TAF1LQ8IZX4 1826 aa24.07■■□□□ 1.44
COL9A1-203ENST00000360859 EYA1Q99502 592 aa24.06■■□□□ 1.44
COL9A1-203ENST00000360859 POLKQ9UBT6 870 aa24.05■■□□□ 1.44
COL9A1-203ENST00000360859 YBX3P16989 372 aaKnown RBP eCLIP24.04■■□□□ 1.44
COL9A1-203ENST00000360859 C4BP0C0L5 1744 aa24.04■■□□□ 1.44
COL9A1-203ENST00000360859 AK7Q96M32 723 aa24.03■■□□□ 1.44
COL9A1-203ENST00000360859 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.03■■□□□ 1.44
COL9A1-203ENST00000360859 MAP2P11137 1827 aaKnown RBP24.03■■□□□ 1.44
COL9A1-203ENST00000360859 GOLGB1Q14789 3259 aaKnown RBP24.02■■□□□ 1.44
COL9A1-203ENST00000360859 AMIGO3Q86WK7 504 aa24.02■■□□□ 1.44
COL9A1-203ENST00000360859 POLR3GLQ9BT43 218 aa24.02■■□□□ 1.44
COL9A1-203ENST00000360859 GRIN3BO60391 1043 aa24.01■■□□□ 1.43
COL9A1-203ENST00000360859 C1QTNF8P60827 252 aa24.01■■□□□ 1.43
COL9A1-203ENST00000360859 CLSPNQ9HAW4 1339 aa24.01■■□□□ 1.43
COL9A1-203ENST00000360859 CD2APQ9Y5K6 639 aa24■■□□□ 1.43
COL9A1-203ENST00000360859 LOC102724428A0A0B4J2F2 783 aa23.99■■□□□ 1.43
COL9A1-203ENST00000360859 TNNT2P45379 298 aaPredicted RBP23.99■■□□□ 1.43
COL9A1-203ENST00000360859 SIK1P57059 783 aa23.99■■□□□ 1.43
COL9A1-203ENST00000360859 SMIM5Q71RC9 77 aa23.99■■□□□ 1.43
COL9A1-203ENST00000360859 PCGF6Q9BYE7 350 aa23.99■■□□□ 1.43
COL9A1-203ENST00000360859 TMOD3Q9NYL9 352 aa23.99■■□□□ 1.43
COL9A1-203ENST00000360859 PHF14O94880 888 aa23.98■■□□□ 1.43
COL9A1-203ENST00000360859 PHKG2P15735 406 aa23.98■■□□□ 1.43
COL9A1-203ENST00000360859 EIF4A2Q14240 407 aaKnown RBP23.98■■□□□ 1.43
COL9A1-203ENST00000360859 IFNL2Q8IZJ0 200 aa23.98■■□□□ 1.43
COL9A1-203ENST00000360859 ASAP1Q9ULH1 1129 aa23.98■■□□□ 1.43
COL9A1-203ENST00000360859 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.97■■□□□ 1.43
COL9A1-203ENST00000360859 LINC00116Q8NCU8 138 aa23.97■■□□□ 1.43
COL9A1-203ENST00000360859 UBR3Q6ZT12 1888 aa23.96■■□□□ 1.43
COL9A1-203ENST00000360859 SENP3-EIF4A1A0A087X0R7 540 aa23.94■■□□□ 1.42
COL9A1-203ENST00000360859 SSFA2P28290 1259 aa23.94■■□□□ 1.42
COL9A1-203ENST00000360859 ITPK1Q13572 414 aa23.94■■□□□ 1.42
COL9A1-203ENST00000360859 GIGYF1O75420 1035 aaPredicted RBP23.93■■□□□ 1.42
COL9A1-203ENST00000360859 ATG3Q9NT62 314 aa23.93■■□□□ 1.42
COL9A1-203ENST00000360859 ATP6V1AP38606 617 aa23.92■■□□□ 1.42
COL9A1-203ENST00000360859 PLEKHG2Q9H7P9 1386 aa23.91■■□□□ 1.42
COL9A1-203ENST00000360859 IGSF1Q8N6C5 1336 aa23.91■■□□□ 1.42
COL9A1-203ENST00000360859 GNPATO15228 680 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms