RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 ST18O60284 1047 aa6.6□□□□□ -1.35
ATXN3-202ENST00000359366 FCHSD2O94868 740 aa6.6□□□□□ -1.35
ATXN3-202ENST00000359366 USHBP1Q8N6Y0 703 aa6.6□□□□□ -1.35
ATXN3-202ENST00000359366 PANK1Q8TE04 598 aa6.6□□□□□ -1.35
ATXN3-202ENST00000359366 FANCIQ9NVI1 1328 aa6.59□□□□□ -1.35
ATXN3-202ENST00000359366 AATKQ6ZMQ8 1374 aa6.59□□□□□ -1.35
ATXN3-202ENST00000359366 STRCP1A6NGW2 1772 aa6.59□□□□□ -1.35
ATXN3-202ENST00000359366 ELL2O00472 640 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-202ENST00000359366 EXOSC9Q06265 439 aaKnown RBP6.59□□□□□ -1.35
ATXN3-202ENST00000359366 CLUAP1Q96AJ1 413 aa6.59□□□□□ -1.35
ATXN3-202ENST00000359366 PDIA4P13667 645 aaKnown RBP6.59□□□□□ -1.36
ATXN3-202ENST00000359366 CANXP27824 592 aaKnown RBP6.59□□□□□ -1.36
ATXN3-202ENST00000359366 WDR63Q8IWG1 891 aa6.58□□□□□ -1.36
ATXN3-202ENST00000359366 TTC21AQ8NDW8 1320 aa6.58□□□□□ -1.36
ATXN3-202ENST00000359366 TMEM94Q12767 1356 aa6.58□□□□□ -1.36
ATXN3-202ENST00000359366 RARSP54136 660 aaKnown RBP6.58□□□□□ -1.36
ATXN3-202ENST00000359366 NFE2L2Q16236 605 aa6.58□□□□□ -1.36
ATXN3-202ENST00000359366 CCDC27Q2M243 656 aa6.58□□□□□ -1.36
ATXN3-202ENST00000359366 MCM10Q7L590 875 aa6.58□□□□□ -1.36
ATXN3-202ENST00000359366 DLG5Q8TDM6 1919 aa6.58□□□□□ -1.36
ATXN3-202ENST00000359366 ANKARQ7Z5J8 1434 aa6.57□□□□□ -1.36
ATXN3-202ENST00000359366 NEFMP07197 916 aa6.57□□□□□ -1.36
ATXN3-202ENST00000359366 RLBP1P12271 317 aa6.57□□□□□ -1.36
ATXN3-202ENST00000359366 EYA1Q99502 592 aa6.57□□□□□ -1.36
ATXN3-202ENST00000359366 MYH16Q9H6N6 1097 aa6.57□□□□□ -1.36
ATXN3-202ENST00000359366 COG6Q9Y2V7 657 aa6.57□□□□□ -1.36
ATXN3-202ENST00000359366 USP31Q70CQ4 1352 aa6.57□□□□□ -1.36
ATXN3-202ENST00000359366 MARF1Q9Y4F3 1742 aaKnown RBP6.57□□□□□ -1.36
ATXN3-202ENST00000359366 KRT24Q2M2I5 525 aa6.57□□□□□ -1.36
ATXN3-202ENST00000359366 ZNF335Q9H4Z2 1342 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-202ENST00000359366 MIS18AQ9NYP9 233 aa6.57□□□□□ -1.36
ATXN3-202ENST00000359366 ATF3P18847 181 aa6.56□□□□□ -1.36
ATXN3-202ENST00000359366 HOXC9P31274 260 aa6.56□□□□□ -1.36
ATXN3-202ENST00000359366 PDE4CQ08493 712 aa6.56□□□□□ -1.36
ATXN3-202ENST00000359366 TSPYL6Q8N831 410 aa6.56□□□□□ -1.36
ATXN3-202ENST00000359366 CABLES1Q8TDN4 633 aa6.56□□□□□ -1.36
ATXN3-202ENST00000359366 KRT28Q7Z3Y7 464 aa6.56□□□□□ -1.36
ATXN3-202ENST00000359366 NGEFQ8N5V2 710 aa6.56□□□□□ -1.36
ATXN3-202ENST00000359366 SSH1Q8WYL5 1049 aa6.56□□□□□ -1.36
ATXN3-202ENST00000359366 LRRC59Q96AG4 307 aaKnown RBP6.56□□□□□ -1.36
ATXN3-202ENST00000359366 C19orf44Q9H6X5 657 aa6.56□□□□□ -1.36
ATXN3-202ENST00000359366 FLT4P35916 1363 aa6.55□□□□□ -1.36
ATXN3-202ENST00000359366 ZC3H6P61129 1189 aaKnown RBP6.55□□□□□ -1.36
ATXN3-202ENST00000359366 MBIPQ9NS73 344 aa6.55□□□□□ -1.36
ATXN3-202ENST00000359366 SMC4Q9NTJ3 1288 aa6.55□□□□□ -1.36
ATXN3-202ENST00000359366 LMTK3Q96Q04 1460 aa6.55□□□□□ -1.36
ATXN3-202ENST00000359366 SBNO1A3KN83 1393 aa6.55□□□□□ -1.36
ATXN3-202ENST00000359366 MTHFSDQ2M296 383 aaKnown RBP6.55□□□□□ -1.36
ATXN3-202ENST00000359366 PNNQ9H307 717 aaKnown RBP6.55□□□□□ -1.36
ATXN3-202ENST00000359366 C1orf167Q5SNV9 1468 aa6.54□□□□□ -1.36
ATXN3-202ENST00000359366 NWD1Q149M9 1564 aa6.54□□□□□ -1.36
ATXN3-202ENST00000359366 MKRN4PQ13434 485 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-202ENST00000359366 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-202ENST00000359366 C8orf58Q8NAV2 365 aa6.54□□□□□ -1.36
ATXN3-202ENST00000359366 RBM19Q9Y4C8 960 aaKnown RBP6.54□□□□□ -1.36
ATXN3-202ENST00000359366 LTN1O94822 1766 aa6.54□□□□□ -1.36
ATXN3-202ENST00000359366 STRCQ7RTU9 1775 aa6.54□□□□□ -1.36
ATXN3-202ENST00000359366 RGPD2P0DJD1 1756 aa6.53□□□□□ -1.36
ATXN3-202ENST00000359366 GCP02774 474 aa6.53□□□□□ -1.36
ATXN3-202ENST00000359366 NBPF6Q5VWK0 638 aa6.53□□□□□ -1.36
ATXN3-202ENST00000359366 HOMEZQ8IX15 550 aa6.53□□□□□ -1.36
ATXN3-202ENST00000359366 NBPF4Q96M43 638 aa6.53□□□□□ -1.36
ATXN3-202ENST00000359366 NOB1Q9ULX3 412 aaKnown RBP6.53□□□□□ -1.36
ATXN3-202ENST00000359366 AXIN2Q9Y2T1 843 aa6.53□□□□□ -1.36
ATXN3-202ENST00000359366 CHRNA2Q15822 529 aa6.53□□□□□ -1.36
ATXN3-202ENST00000359366 KLHL34Q8N239 644 aa6.53□□□□□ -1.36
ATXN3-202ENST00000359366 TMEM121BQ9BXQ6 578 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-202ENST00000359366 MST1RQ04912 1400 aa6.53□□□□□ -1.36
ATXN3-202ENST00000359366 RGPD1P0DJD0 1748 aa6.53□□□□□ -1.36
ATXN3-202ENST00000359366 IGHDP01880 384 aa6.52□□□□□ -1.37
ATXN3-202ENST00000359366 IGSF1Q8N6C5 1336 aa6.52□□□□□ -1.37
ATXN3-202ENST00000359366 TRIM27P14373 513 aa6.52□□□□□ -1.37
ATXN3-202ENST00000359366 MS4A3Q96HJ5 214 aa6.52□□□□□ -1.37
ATXN3-202ENST00000359366 NFAT5O94916 1531 aa6.52□□□□□ -1.37
ATXN3-202ENST00000359366 XIRP1Q702N8 1843 aaKnown RBP6.51□□□□□ -1.37
ATXN3-202ENST00000359366 IL16Q14005 1332 aa6.51□□□□□ -1.37
ATXN3-202ENST00000359366 VAMP4O75379 141 aa6.51□□□□□ -1.37
ATXN3-202ENST00000359366 TAF7LQ5H9L4 462 aa6.51□□□□□ -1.37
ATXN3-202ENST00000359366 FTSJ3Q8IY81 847 aaKnown RBP6.51□□□□□ -1.37
ATXN3-202ENST00000359366 IP6K1Q92551 441 aa6.51□□□□□ -1.37
ATXN3-202ENST00000359366 NECTIN2Q92692 538 aa6.51□□□□□ -1.37
ATXN3-202ENST00000359366 ARHGEF10O15013 1369 aa6.51□□□□□ -1.37
ATXN3-202ENST00000359366 RGPD5Q99666 1765 aa6.51□□□□□ -1.37
ATXN3-202ENST00000359366 ZNF853P0CG23 659 aa6.51□□□□□ -1.37
ATXN3-202ENST00000359366 GNAI1P63096 354 aa6.51□□□□□ -1.37
ATXN3-202ENST00000359366 TWISTNBQ3B726 338 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-202ENST00000359366 ITPRIPQ8IWB1 547 aa6.51□□□□□ -1.37
ATXN3-202ENST00000359366 CFAP44Q96MT7 982 aa6.51□□□□□ -1.37
ATXN3-202ENST00000359366 IFT57Q9NWB7 429 aa6.51□□□□□ -1.37
ATXN3-202ENST00000359366 MSH6P52701 1360 aa6.5□□□□□ -1.37
ATXN3-202ENST00000359366 RGS3P49796 1198 aa6.5□□□□□ -1.37
ATXN3-202ENST00000359366 FGD1P98174 961 aa6.5□□□□□ -1.37
ATXN3-202ENST00000359366 PDE3AQ14432 1141 aa6.5□□□□□ -1.37
ATXN3-202ENST00000359366 ZKSCAN2Q63HK3 967 aa6.5□□□□□ -1.37
ATXN3-202ENST00000359366 CADPS2Q86UW7 1296 aa6.5□□□□□ -1.37
ATXN3-202ENST00000359366 ARHGEF25Q86VW2 580 aa6.5□□□□□ -1.37
ATXN3-202ENST00000359366 ANKRD24Q8TF21 1146 aa6.5□□□□□ -1.37
ATXN3-202ENST00000359366 PCDHB15Q9Y5E8 787 aa6.5□□□□□ -1.37
ATXN3-202ENST00000359366 TRPM3Q9HCF6 1732 aaPredicted RBP6.5□□□□□ -1.37
ATXN3-202ENST00000359366 LMOD3Q0VAK6 560 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms