RNA–Protein interactions for RNA: ENST00000358918.7

APP-205, Transcript of amyloid beta precursor protein, humanhuman

TSL 5 BASIC

Gene APP, Length 2,366 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-205ENST00000358918 GPT2Q8TD30 523 aa17.64■□□□□ 0.41
APP-205ENST00000358918 WASLO00401 505 aaPredicted RBP17.64■□□□□ 0.41
APP-205ENST00000358918 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.64■□□□□ 0.41
APP-205ENST00000358918 C1orf115Q9H7X2 142 aa17.64■□□□□ 0.41
APP-205ENST00000358918 PKP1Q13835 747 aa17.63■□□□□ 0.41
APP-205ENST00000358918 ZNF428Q96B54 188 aa17.62■□□□□ 0.41
APP-205ENST00000358918 BRPF1P55201 1214 aaPredicted RBP17.62■□□□□ 0.41
APP-205ENST00000358918 CCDC94Q9BW85 323 aaPredicted RBP17.61■□□□□ 0.41
APP-205ENST00000358918 SYCE3A1L190 88 aa17.61■□□□□ 0.41
APP-205ENST00000358918 ST18O60284 1047 aa17.6■□□□□ 0.41
APP-205ENST00000358918 PTMAP06454 111 aaKnown RBP17.6■□□□□ 0.41
APP-205ENST00000358918 GSPT1P15170 499 aaKnown RBP17.6■□□□□ 0.41
APP-205ENST00000358918 NCKAP5LQ9HCH0 1330 aa17.6■□□□□ 0.41
APP-205ENST00000358918 KIAA2012Q0VF49 1180 aa17.6■□□□□ 0.41
APP-205ENST00000358918 TMEM63CQ9P1W3 806 aa17.6■□□□□ 0.41
APP-205ENST00000358918 ADAMTS13Q76LX8 1427 aa17.59■□□□□ 0.41
APP-205ENST00000358918 USP26Q9BXU7 913 aa17.59■□□□□ 0.41
APP-205ENST00000358918 PIK3R4Q99570 1358 aa17.59■□□□□ 0.41
APP-205ENST00000358918 MBD3O95983 291 aa17.59■□□□□ 0.41
APP-205ENST00000358918 ARHGAP45Q92619 1136 aa17.59■□□□□ 0.41
APP-205ENST00000358918 SLC26A8Q96RN1 970 aa17.59■□□□□ 0.41
APP-205ENST00000358918 TECPR2O15040 1411 aa17.59■□□□□ 0.41
APP-205ENST00000358918 FAM135BQ49AJ0 1406 aa17.59■□□□□ 0.41
APP-205ENST00000358918 UTP14CQ5TAP6 766 aaKnown RBP17.58■□□□□ 0.41
APP-205ENST00000358918 INTS3Q68E01 1043 aaKnown RBP17.58■□□□□ 0.41
APP-205ENST00000358918 SIRT2Q8IXJ6 389 aa17.58■□□□□ 0.41
APP-205ENST00000358918 NUDT16Q96DE0 195 aaKnown RBP17.58■□□□□ 0.41
APP-205ENST00000358918 SIRT1Q96EB6 747 aa17.58■□□□□ 0.41
APP-205ENST00000358918 PRDM10Q9NQV6 1147 aa17.58■□□□□ 0.41
APP-205ENST00000358918 COL3A1P02461 1466 aaPredicted RBP17.58■□□□□ 0.4
APP-205ENST00000358918 ATP7BP35670 1465 aa17.58■□□□□ 0.4
APP-205ENST00000358918 ROBO2Q9HCK4 1378 aa17.58■□□□□ 0.4
APP-205ENST00000358918 FBLN1P23142 703 aa17.58■□□□□ 0.4
APP-205ENST00000358918 ZGPATQ8N5A5 531 aaKnown RBP17.58■□□□□ 0.4
APP-205ENST00000358918 C3P01024 1663 aa17.58■□□□□ 0.4
APP-205ENST00000358918 PLEKHG1Q9ULL1 1385 aa17.57■□□□□ 0.4
APP-205ENST00000358918 PLEKHM2Q8IWE5 1019 aa17.57■□□□□ 0.4
APP-205ENST00000358918 PTCH1Q13635 1447 aa17.57■□□□□ 0.4
APP-205ENST00000358918 ANKRD26Q9UPS8 1709 aa17.57■□□□□ 0.4
APP-205ENST00000358918 KNDC1Q76NI1 1749 aa17.57■□□□□ 0.4
APP-205ENST00000358918 TTC22Q5TAA0 569 aa17.57■□□□□ 0.4
APP-205ENST00000358918 MYRIPQ8NFW9 859 aa17.57■□□□□ 0.4
APP-205ENST00000358918 ZDHHC9Q9Y397 364 aa17.57■□□□□ 0.4
APP-205ENST00000358918 EID1Q9Y6B2 187 aa17.57■□□□□ 0.4
APP-205ENST00000358918 DMTNQ08495 405 aa17.56■□□□□ 0.4
APP-205ENST00000358918 DNTTIP2Q5QJE6 756 aaKnown RBP17.56■□□□□ 0.4
APP-205ENST00000358918 CASC1Q6TDU7 716 aa17.56■□□□□ 0.4
APP-205ENST00000358918 MRPL50Q8N5N7 158 aaKnown RBP17.56■□□□□ 0.4
APP-205ENST00000358918 RNF214Q8ND24 703 aa17.56■□□□□ 0.4
APP-205ENST00000358918 CPS1P31327 1500 aa17.56■□□□□ 0.4
APP-205ENST00000358918 KIF20BQ96Q89 1820 aa17.55■□□□□ 0.4
APP-205ENST00000358918 FER1L4A9Z1Z3 1794 aa17.55■□□□□ 0.4
APP-205ENST00000358918 TSPY26PQ9H489 355 aa17.55■□□□□ 0.4
APP-205ENST00000358918 CCDC61Q9Y6R9 512 aa17.55■□□□□ 0.4
APP-205ENST00000358918 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.54■□□□□ 0.4
APP-205ENST00000358918 AK9Q5TCS8 1911 aa17.54■□□□□ 0.4
APP-205ENST00000358918 PRIMPOLQ96LW4 560 aa17.54■□□□□ 0.4
APP-205ENST00000358918 ZHX1Q9UKY1 873 aaPredicted RBP17.54■□□□□ 0.4
APP-205ENST00000358918 ABCC4O15439 1325 aa17.54■□□□□ 0.4
APP-205ENST00000358918 CPSF1Q10570 1443 aaKnown RBP17.54■□□□□ 0.4
APP-205ENST00000358918 NME9Q86XW9 330 aa17.53■□□□□ 0.4
APP-205ENST00000358918 NSFL1CQ9UNZ2 370 aaKnown RBP17.53■□□□□ 0.4
APP-205ENST00000358918 NUTM2FA1L443 756 aa17.53■□□□□ 0.4
APP-205ENST00000358918 DIAPH1O60610 1272 aaKnown RBP17.53■□□□□ 0.4
APP-205ENST00000358918 SYAP1Q96A49 352 aaPredicted RBP17.53■□□□□ 0.4
APP-205ENST00000358918 HMGN5P82970 282 aaKnown RBP17.52■□□□□ 0.4
APP-205ENST00000358918 PRR36Q9H6K5 1346 aa17.52■□□□□ 0.4
APP-205ENST00000358918 ZRANB1Q9UGI0 708 aa17.52■□□□□ 0.4
APP-205ENST00000358918 VAMP4O75379 141 aa17.52■□□□□ 0.39
APP-205ENST00000358918 POLKQ9UBT6 870 aa17.51■□□□□ 0.39
APP-205ENST00000358918 EDC4Q6P2E9 1401 aaKnown RBP17.51■□□□□ 0.39
APP-205ENST00000358918 PTPRUQ92729 1446 aa17.51■□□□□ 0.39
APP-205ENST00000358918 REC8O95072 547 aa17.51■□□□□ 0.39
APP-205ENST00000358918 CHAMP1Q96JM3 812 aa17.51■□□□□ 0.39
APP-205ENST00000358918 FOXD4L5Q5VV16 416 aaPredicted RBP17.5■□□□□ 0.39
APP-205ENST00000358918 THEMISQ8N1K5 641 aaPredicted RBP17.5■□□□□ 0.39
APP-205ENST00000358918 FOXD4L4Q8WXT5 416 aaPredicted RBP17.5■□□□□ 0.39
APP-205ENST00000358918 DCTPP1Q9H773 170 aa17.5■□□□□ 0.39
APP-205ENST00000358918 PHF14O94880 888 aa17.5■□□□□ 0.39
APP-205ENST00000358918 ZSCAN20P17040 1043 aaPredicted RBP17.5■□□□□ 0.39
APP-205ENST00000358918 API5Q9BZZ5 524 aaKnown RBP17.5■□□□□ 0.39
APP-205ENST00000358918 PNPLA6Q8IY17 1366 aa17.49■□□□□ 0.39
APP-205ENST00000358918 AMOTL2Q9Y2J4 779 aa17.49■□□□□ 0.39
APP-205ENST00000358918 CDC42BPGQ6DT37 1551 aa17.49■□□□□ 0.39
APP-205ENST00000358918 SLIT1O75093 1534 aa17.49■□□□□ 0.39
APP-205ENST00000358918 FCHSD2O94868 740 aa17.48■□□□□ 0.39
APP-205ENST00000358918 PIBF1Q8WXW3 757 aa17.48■□□□□ 0.39
APP-205ENST00000358918 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.48■□□□□ 0.39
APP-205ENST00000358918 ARHGAP23Q9P227 1491 aa17.48■□□□□ 0.39
APP-205ENST00000358918 GTF2F1P35269 517 aaKnown RBP eCLIP17.48■□□□□ 0.39
APP-205ENST00000358918 SDSP20132 328 aa17.47■□□□□ 0.39
APP-205ENST00000358918 C16orf71Q8IYS4 520 aaPredicted RBP17.47■□□□□ 0.39
APP-205ENST00000358918 EMILIN1Q9Y6C2 1016 aa17.47■□□□□ 0.39
APP-205ENST00000358918 ZBTB7CA1YPR0 619 aa17.47■□□□□ 0.39
APP-205ENST00000358918 GTPBP4Q9BZE4 634 aaKnown RBP17.47■□□□□ 0.39
APP-205ENST00000358918 NOLC1Q14978 699 aaKnown RBP eCLIP17.46■□□□□ 0.395e-7■■□□□ 11.6
APP-205ENST00000358918 ZNF710Q8N1W2 664 aa17.46■□□□□ 0.39
APP-205ENST00000358918 TSPYL6Q8N831 410 aa17.46■□□□□ 0.39
APP-205ENST00000358918 FAM184AQ8NB25 1140 aa17.46■□□□□ 0.39
APP-205ENST00000358918 KIF24Q5T7B8 1368 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms