RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 NCAPD2Q15021 1401 aa17.05■□□□□ 0.32
NFIX-201ENST00000358552 PLIN1O60240 522 aa17.04■□□□□ 0.32
NFIX-201ENST00000358552 ZKSCAN2Q63HK3 967 aa17.04■□□□□ 0.32
NFIX-201ENST00000358552 EXOC6Q8TAG9 804 aa17.04■□□□□ 0.32
NFIX-201ENST00000358552 CABLES1Q8TDN4 633 aa17.04■□□□□ 0.32
NFIX-201ENST00000358552 TSR2Q969E8 191 aaKnown RBP17.04■□□□□ 0.32
NFIX-201ENST00000358552 RGPD5Q99666 1765 aa17.04■□□□□ 0.32
NFIX-201ENST00000358552 DLG5Q8TDM6 1919 aa17.04■□□□□ 0.32
NFIX-201ENST00000358552 KIAA0232Q92628 1395 aa17.04■□□□□ 0.32
NFIX-201ENST00000358552 CHL1O00533 1208 aa17.04■□□□□ 0.32
NFIX-201ENST00000358552 ANKRD24Q8TF21 1146 aa17.04■□□□□ 0.32
NFIX-201ENST00000358552 LTV1Q96GA3 475 aaPredicted RBP17.04■□□□□ 0.32
NFIX-201ENST00000358552 CHMP4BQ9H444 224 aaKnown RBP17.04■□□□□ 0.32
NFIX-201ENST00000358552 PLEKHG5O94827 1062 aa17.03■□□□□ 0.32
NFIX-201ENST00000358552 LAS1LQ9Y4W2 734 aaKnown RBP17.03■□□□□ 0.32
NFIX-201ENST00000358552 NBPF6Q5VWK0 638 aa17.02■□□□□ 0.32
NFIX-201ENST00000358552 B4GALNT3Q6L9W6 998 aa17.02■□□□□ 0.32
NFIX-201ENST00000358552 ARHGAP45Q92619 1136 aa17.02■□□□□ 0.32
NFIX-201ENST00000358552 NBPF4Q96M43 638 aa17.02■□□□□ 0.32
NFIX-201ENST00000358552 CRBNQ96SW2 442 aa17.02■□□□□ 0.32
NFIX-201ENST00000358552 MBIPQ9NS73 344 aa17.02■□□□□ 0.32
NFIX-201ENST00000358552 SMC4Q9NTJ3 1288 aa17.02■□□□□ 0.32
NFIX-201ENST00000358552 ERBB3P21860 1342 aa17.02■□□□□ 0.32
NFIX-201ENST00000358552 COL18A1P39060 1754 aa17.02■□□□□ 0.31
NFIX-201ENST00000358552 MAP3K5Q99683 1374 aa17.01■□□□□ 0.31
NFIX-201ENST00000358552 ZC3H6P61129 1189 aaKnown RBP17.01■□□□□ 0.31
NFIX-201ENST00000358552 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.01■□□□□ 0.31
NFIX-201ENST00000358552 ZBTB7CA1YPR0 619 aa17■□□□□ 0.31
NFIX-201ENST00000358552 VAMP4O75379 141 aa17■□□□□ 0.31
NFIX-201ENST00000358552 TWISTNBQ3B726 338 aaPredicted RBP16.99■□□□□ 0.31
NFIX-201ENST00000358552 AKAP4Q5JQC9 854 aa16.99■□□□□ 0.31
NFIX-201ENST00000358552 FRAT1Q92837 279 aaPredicted RBP16.99■□□□□ 0.31
NFIX-201ENST00000358552 FAM83GA6ND36 823 aa16.99■□□□□ 0.31
NFIX-201ENST00000358552 ERICH6Q7L0X2 663 aa16.99■□□□□ 0.31
NFIX-201ENST00000358552 SSH1Q8WYL5 1049 aa16.99■□□□□ 0.31
NFIX-201ENST00000358552 CRB1P82279 1406 aa16.98■□□□□ 0.31
NFIX-201ENST00000358552 ATF7IPQ6VMQ6 1270 aa16.98■□□□□ 0.31
NFIX-201ENST00000358552 FTSJ3Q8IY81 847 aaKnown RBP16.98■□□□□ 0.31
NFIX-201ENST00000358552 DZIP1LQ8IYY4 767 aaKnown RBP16.98■□□□□ 0.31
NFIX-201ENST00000358552 FAM208AQ9UK61 1670 aaKnown RBP16.97■□□□□ 0.31
NFIX-201ENST00000358552 TAF7Q15545 349 aaPredicted RBP16.97■□□□□ 0.31
NFIX-201ENST00000358552 MCM10Q7L590 875 aa16.97■□□□□ 0.31
NFIX-201ENST00000358552 THUMPD2Q9BTF0 503 aaKnown RBP16.97■□□□□ 0.31
NFIX-201ENST00000358552 OVOS2A0A0G2JMS6 1433 aa16.97■□□□□ 0.31
NFIX-201ENST00000358552 CAMTA1Q9Y6Y1 1673 aa16.97■□□□□ 0.31
NFIX-201ENST00000358552 RGPD2P0DJD1 1756 aa16.96■□□□□ 0.31
NFIX-201ENST00000358552 C1orf141Q5JVX7 400 aa16.96■□□□□ 0.31
NFIX-201ENST00000358552 C20orf194Q5TEA3 1177 aa16.96■□□□□ 0.31
NFIX-201ENST00000358552 RAPGEF4Q8WZA2 1011 aa16.96■□□□□ 0.31
NFIX-201ENST00000358552 AXIN2Q9Y2T1 843 aa16.96■□□□□ 0.31
NFIX-201ENST00000358552 DCTN1Q14203 1278 aa16.96■□□□□ 0.3
NFIX-201ENST00000358552 CENPQQ7L2Z9 268 aaPredicted RBP16.95■□□□□ 0.3
NFIX-201ENST00000358552 TSPYL4Q9UJ04 414 aa16.95■□□□□ 0.3
NFIX-201ENST00000358552 DDX19BQ9UMR2 479 aa16.95■□□□□ 0.3
NFIX-201ENST00000358552 CEMIPQ8WUJ3 1361 aa16.94■□□□□ 0.3
NFIX-201ENST00000358552 TATP17735 454 aaPredicted RBP16.94■□□□□ 0.3
NFIX-201ENST00000358552 SPG7Q9UQ90 795 aa16.94■□□□□ 0.3
NFIX-201ENST00000358552 JCADQ9P266 1359 aa16.94■□□□□ 0.3
NFIX-201ENST00000358552 LMO7Q8WWI1 1683 aa16.93■□□□□ 0.3
NFIX-201ENST00000358552 CSB-PGBD3P0DP91 1061 aa16.93■□□□□ 0.3
NFIX-201ENST00000358552 API5Q9BZZ5 524 aaKnown RBP16.93■□□□□ 0.3
NFIX-201ENST00000358552 PRDM11Q9NQV5 511 aa16.93■□□□□ 0.3
NFIX-201ENST00000358552 MVPQ14764 893 aaKnown RBP16.93■□□□□ 0.3
NFIX-201ENST00000358552 CHRNA2Q15822 529 aa16.93■□□□□ 0.3
NFIX-201ENST00000358552 CLUAP1Q96AJ1 413 aa16.93■□□□□ 0.3
NFIX-201ENST00000358552 NLRP2Q9NX02 1062 aa16.93■□□□□ 0.3
NFIX-201ENST00000358552 NOB1Q9ULX3 412 aaKnown RBP16.93■□□□□ 0.3
NFIX-201ENST00000358552 HSP90AB1P08238 724 aaKnown RBP16.92■□□□□ 0.3
NFIX-201ENST00000358552 ZNF530Q6P9A1 599 aaPredicted RBP16.92■□□□□ 0.3
NFIX-201ENST00000358552 MRPL50Q8N5N7 158 aaKnown RBP16.92■□□□□ 0.3
NFIX-201ENST00000358552 USHBP1Q8N6Y0 703 aa16.92■□□□□ 0.3
NFIX-201ENST00000358552 COL14A1Q05707 1796 aaKnown RBP16.92■□□□□ 0.3
NFIX-201ENST00000358552 HOXB7P09629 217 aa16.91■□□□□ 0.3
NFIX-201ENST00000358552 HSPA1LP34931 641 aa16.91■□□□□ 0.3
NFIX-201ENST00000358552 C8orf58Q8NAV2 365 aa16.91■□□□□ 0.3
NFIX-201ENST00000358552 IL17REQ8NFR9 667 aa16.91■□□□□ 0.3
NFIX-201ENST00000358552 BCL2L13Q9BXK5 485 aa16.91■□□□□ 0.3
NFIX-201ENST00000358552 TRIM27P14373 513 aa16.9■□□□□ 0.3
NFIX-201ENST00000358552 TEFQ10587 303 aa16.9■□□□□ 0.3
NFIX-201ENST00000358552 LRRC37A3O60309 1634 aa16.9■□□□□ 0.3
NFIX-201ENST00000358552 PTPRCP08575 1304 aa16.9■□□□□ 0.3
NFIX-201ENST00000358552 PANK1Q8TE04 598 aa16.9■□□□□ 0.3
NFIX-201ENST00000358552 COG6Q9Y2V7 657 aa16.9■□□□□ 0.3
NFIX-201ENST00000358552 WDR17Q8IZU2 1322 aa16.89■□□□□ 0.29
NFIX-201ENST00000358552 TSPYL6Q8N831 410 aa16.89■□□□□ 0.29
NFIX-201ENST00000358552 CCDC30Q5VVM6 783 aa16.88■□□□□ 0.29
NFIX-201ENST00000358552 IFNL2Q8IZJ0 200 aa16.87■□□□□ 0.29
NFIX-201ENST00000358552 SPATA31A6Q5VVP1 1343 aa16.87■□□□□ 0.29
NFIX-201ENST00000358552 RNMTO43148 476 aaKnown RBP16.87■□□□□ 0.29
NFIX-201ENST00000358552 CARD10Q9BWT7 1032 aa16.87■□□□□ 0.29
NFIX-201ENST00000358552 STK31Q9BXU1 1019 aa16.87■□□□□ 0.29
NFIX-201ENST00000358552 COL5A2P05997 1499 aaPredicted RBP16.86■□□□□ 0.29
NFIX-201ENST00000358552 TCERG1O14776 1098 aaKnown RBP16.86■□□□□ 0.29
NFIX-201ENST00000358552 RWDD1Q9H446 243 aaPredicted RBP16.86■□□□□ 0.29
NFIX-201ENST00000358552 KDM2BQ8NHM5 1336 aa16.86■□□□□ 0.29
NFIX-201ENST00000358552 PLCH1Q4KWH8 1693 aa16.86■□□□□ 0.29
NFIX-201ENST00000358552 NUTM2BA6NNL0 878 aaPredicted RBP16.85■□□□□ 0.29
NFIX-201ENST00000358552 NUTM2EB1AL46 878 aaPredicted RBP16.85■□□□□ 0.29
NFIX-201ENST00000358552 ELL2O00472 640 aaPredicted RBP16.85■□□□□ 0.29
NFIX-201ENST00000358552 NUTM2AQ8IVF1 878 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms