RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 PBRM1Q86U86 1689 aa17.49■□□□□ 0.39
SLC6A20-202ENST00000358525 TBC1D2BQ9UPU7 963 aa17.49■□□□□ 0.39
SLC6A20-202ENST00000358525 ABCA5Q8WWZ7 1642 aa17.49■□□□□ 0.39
SLC6A20-202ENST00000358525 PDRG1Q9NUG6 133 aa17.48■□□□□ 0.39
SLC6A20-202ENST00000358525 RAD21O60216 631 aa17.48■□□□□ 0.39
SLC6A20-202ENST00000358525 CCDC158Q5M9N0 1113 aa17.48■□□□□ 0.39
SLC6A20-202ENST00000358525 KCNH5Q8NCM2 988 aa17.48■□□□□ 0.39
SLC6A20-202ENST00000358525 HOMER1Q86YM7 354 aa17.48■□□□□ 0.39
SLC6A20-202ENST00000358525 AEBP1Q8IUX7 1158 aa17.47■□□□□ 0.39
SLC6A20-202ENST00000358525 NOC3LQ8WTT2 800 aaKnown RBP17.47■□□□□ 0.39
SLC6A20-202ENST00000358525 RBM33Q96EV2 1170 aaKnown RBP17.47■□□□□ 0.39
SLC6A20-202ENST00000358525 WDR7Q9Y4E6 1490 aa17.47■□□□□ 0.39
SLC6A20-202ENST00000358525 POLR3AO14802 1390 aaPredicted RBP17.47■□□□□ 0.39
SLC6A20-202ENST00000358525 CNNM1Q9NRU3 951 aa17.47■□□□□ 0.39
SLC6A20-202ENST00000358525 TNNQ9UQP3 1299 aa17.47■□□□□ 0.39
SLC6A20-202ENST00000358525 MAGI3Q5TCQ9 1506 aa17.47■□□□□ 0.39
SLC6A20-202ENST00000358525 UHRF1BP1Q6BDS2 1440 aa17.47■□□□□ 0.39
SLC6A20-202ENST00000358525 KIF1BPQ96EK5 621 aa17.47■□□□□ 0.39
SLC6A20-202ENST00000358525 LRRFIP2Q9Y608 721 aaKnown RBP17.47■□□□□ 0.39
SLC6A20-202ENST00000358525 COL17A1Q9UMD9 1497 aaPredicted RBP17.47■□□□□ 0.39
SLC6A20-202ENST00000358525 DHX16O60231 1041 aaKnown RBP17.46■□□□□ 0.39
SLC6A20-202ENST00000358525 ANKRD1Q15327 319 aa17.46■□□□□ 0.39
SLC6A20-202ENST00000358525 TRIM5Q9C035 493 aa17.46■□□□□ 0.39
SLC6A20-202ENST00000358525 UPF3BQ9BZI7 483 aaKnown RBP17.46■□□□□ 0.39
SLC6A20-202ENST00000358525 LARP1BQ659C4 914 aaKnown RBP17.46■□□□□ 0.39
SLC6A20-202ENST00000358525 BLOC1S2Q6QNY1 142 aa17.46■□□□□ 0.39
SLC6A20-202ENST00000358525 TBC1D9Q6ZT07 1266 aa17.46■□□□□ 0.39
SLC6A20-202ENST00000358525 ACEP12821 1306 aa17.46■□□□□ 0.39
SLC6A20-202ENST00000358525 ADGRL2O95490 1459 aa17.46■□□□□ 0.38
SLC6A20-202ENST00000358525 ZNF518AQ6AHZ1 1483 aa17.45■□□□□ 0.38
SLC6A20-202ENST00000358525 KINO60870 393 aaKnown RBP17.45■□□□□ 0.38
SLC6A20-202ENST00000358525 TBC1D32Q96NH3 1257 aa17.45■□□□□ 0.38
SLC6A20-202ENST00000358525 NAT10Q9H0A0 1025 aaKnown RBP17.45■□□□□ 0.38
SLC6A20-202ENST00000358525 PTPRCP08575 1304 aa17.45■□□□□ 0.38
SLC6A20-202ENST00000358525 CASTP20810 708 aaKnown RBP17.45■□□□□ 0.38
SLC6A20-202ENST00000358525 TPM2P07951 284 aa17.44■□□□□ 0.38
SLC6A20-202ENST00000358525 BMP2KLQ5H9B9 411 aa17.44■□□□□ 0.38
SLC6A20-202ENST00000358525 MPNDQ8N594 471 aa17.44■□□□□ 0.38
SLC6A20-202ENST00000358525 PIK3C2GO75747 1445 aa17.44■□□□□ 0.38
SLC6A20-202ENST00000358525 RAB11FIP3O75154 756 aa17.44■□□□□ 0.38
SLC6A20-202ENST00000358525 FLIIQ13045 1269 aa17.44■□□□□ 0.38
SLC6A20-202ENST00000358525 MPRIPQ6WCQ1 1025 aa17.44■□□□□ 0.38
SLC6A20-202ENST00000358525 GOLGA6L1Q8N7Z2 621 aa17.44■□□□□ 0.38
SLC6A20-202ENST00000358525 BCL11BQ9C0K0 894 aaPredicted RBP17.44■□□□□ 0.38
SLC6A20-202ENST00000358525 PHF8Q9UPP1 1060 aa17.44■□□□□ 0.38
SLC6A20-202ENST00000358525 PRDM11Q9NQV5 511 aa17.44■□□□□ 0.38
SLC6A20-202ENST00000358525 TTC21BQ7Z4L5 1316 aa17.44■□□□□ 0.38
SLC6A20-202ENST00000358525 HDAC1Q13547 482 aaPredicted RBP17.43■□□□□ 0.38
SLC6A20-202ENST00000358525 FKBP4Q02790 459 aaKnown RBP eCLIP17.43■□□□□ 0.38
SLC6A20-202ENST00000358525 RRP12Q5JTH9 1297 aaKnown RBP17.43■□□□□ 0.38
SLC6A20-202ENST00000358525 VSIG10Q8N0Z9 540 aa17.43■□□□□ 0.38
SLC6A20-202ENST00000358525 KRT85P78386 507 aa17.43■□□□□ 0.38
SLC6A20-202ENST00000358525 C8orf34Q49A92 452 aa17.43■□□□□ 0.38
SLC6A20-202ENST00000358525 PCMTD1Q96MG8 357 aaPredicted RBP17.43■□□□□ 0.38
SLC6A20-202ENST00000358525 PPP6R1Q9UPN7 881 aa17.43■□□□□ 0.38
SLC6A20-202ENST00000358525 ANKRD20A12PQ8NF67 263 aa17.42■□□□□ 0.38
SLC6A20-202ENST00000358525 ZNF396Q96N95 335 aaPredicted RBP17.42■□□□□ 0.38
SLC6A20-202ENST00000358525 ATP2B1P20020 1258 aa17.42■□□□□ 0.38
SLC6A20-202ENST00000358525 SSFA2P28290 1259 aa17.42■□□□□ 0.38
SLC6A20-202ENST00000358525 CCDC57Q2TAC2 916 aa17.42■□□□□ 0.38
SLC6A20-202ENST00000358525 SPC24Q8NBT2 197 aa17.42■□□□□ 0.38
SLC6A20-202ENST00000358525 NUCB1Q02818 461 aa17.42■□□□□ 0.38
SLC6A20-202ENST00000358525 ZSCAN31Q96LW9 406 aaPredicted RBP17.42■□□□□ 0.38
SLC6A20-202ENST00000358525 GLRX3O76003 335 aaKnown RBP17.42■□□□□ 0.38
SLC6A20-202ENST00000358525 RLBP1P12271 317 aa17.42■□□□□ 0.38
SLC6A20-202ENST00000358525 SART3Q15020 963 aaKnown RBP17.42■□□□□ 0.38
SLC6A20-202ENST00000358525 TNPO1Q92973 898 aaKnown RBP17.42■□□□□ 0.38
SLC6A20-202ENST00000358525 STK38Q15208 465 aa17.41■□□□□ 0.38
SLC6A20-202ENST00000358525 SPINK5Q9NQ38 1064 aaPredicted RBP17.41■□□□□ 0.38
SLC6A20-202ENST00000358525 OLFM4Q6UX06 510 aa17.41■□□□□ 0.38
SLC6A20-202ENST00000358525 DNAAF4Q8WXU2 420 aa17.41■□□□□ 0.38
SLC6A20-202ENST00000358525 CCDC192P0DO97 292 aa17.41■□□□□ 0.38
SLC6A20-202ENST00000358525 PRPF40BQ6NWY9 871 aaKnown RBP17.41■□□□□ 0.38
SLC6A20-202ENST00000358525 FMNL2Q96PY5 1086 aa17.41■□□□□ 0.38
SLC6A20-202ENST00000358525 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.41■□□□□ 0.38
SLC6A20-202ENST00000358525 ZRANB1Q9UGI0 708 aa17.41■□□□□ 0.38
SLC6A20-202ENST00000358525 HSP90AB2PQ58FF8 381 aa17.4■□□□□ 0.38
SLC6A20-202ENST00000358525 MTMR7Q9Y216 660 aa17.4■□□□□ 0.38
SLC6A20-202ENST00000358525 FOXO3O43524 673 aa17.4■□□□□ 0.38
SLC6A20-202ENST00000358525 CCDC47Q96A33 483 aaKnown RBP17.4■□□□□ 0.38
SLC6A20-202ENST00000358525 TNMDQ9H2S6 317 aa17.4■□□□□ 0.38
SLC6A20-202ENST00000358525 CCDC85AQ96PX6 553 aaPredicted RBP17.4■□□□□ 0.38
SLC6A20-202ENST00000358525 PPIP5K1Q6PFW1 1433 aa17.4■□□□□ 0.38
SLC6A20-202ENST00000358525 TSHZ3Q63HK5 1081 aa17.4■□□□□ 0.38
SLC6A20-202ENST00000358525 A0A0U1RQG5 324 aaPredicted RBP17.39■□□□□ 0.38
SLC6A20-202ENST00000358525 SYCE3A1L190 88 aa17.39■□□□□ 0.37
SLC6A20-202ENST00000358525 AMOTQ4VCS5 1084 aa17.39■□□□□ 0.37
SLC6A20-202ENST00000358525 MYD88Q99836 296 aa17.39■□□□□ 0.37
SLC6A20-202ENST00000358525 GCC2Q8IWJ2 1684 aa17.39■□□□□ 0.37
SLC6A20-202ENST00000358525 XBP1P17861 261 aa17.39■□□□□ 0.37
SLC6A20-202ENST00000358525 CCDC83Q8IWF9 413 aa17.39■□□□□ 0.37
SLC6A20-202ENST00000358525 STK11IPQ8N1F8 1099 aa17.39■□□□□ 0.37
SLC6A20-202ENST00000358525 ARHGAP45Q92619 1136 aa17.39■□□□□ 0.37
SLC6A20-202ENST00000358525 TRIM34Q9BYJ4 488 aa17.39■□□□□ 0.37
SLC6A20-202ENST00000358525 BOLA2Q9H3K6 86 aa17.39■□□□□ 0.37
SLC6A20-202ENST00000358525 POLKQ9UBT6 870 aa17.39■□□□□ 0.37
SLC6A20-202ENST00000358525 C8orf58Q8NAV2 365 aa17.38■□□□□ 0.37
SLC6A20-202ENST00000358525 BRMS1Q9HCU9 246 aa17.38■□□□□ 0.37
SLC6A20-202ENST00000358525 TTC22Q5TAA0 569 aa17.38■□□□□ 0.37
SLC6A20-202ENST00000358525 CEP126Q9P2H0 1117 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms