RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 CCDC85AQ96PX6 553 aaPredicted RBP13.11□□□□□ -0.31
COL11A1-202ENST00000358392 NACAP1Q9BZK3 213 aa13.1□□□□□ -0.31
COL11A1-202ENST00000358392 SPDYE4A6NLX3 237 aa13.1□□□□□ -0.31
COL11A1-202ENST00000358392 PRDM2Q13029 1718 aa13.1□□□□□ -0.31
COL11A1-202ENST00000358392 MACROD2A1Z1Q3 448 aa13.1□□□□□ -0.31
COL11A1-202ENST00000358392 SMTNL1A8MU46 457 aa13.1□□□□□ -0.31
COL11A1-202ENST00000358392 DESP17661 470 aa13.1□□□□□ -0.31
COL11A1-202ENST00000358392 CASTP20810 708 aaKnown RBP13.1□□□□□ -0.31
COL11A1-202ENST00000358392 GCC1Q96CN9 775 aa13.1□□□□□ -0.31
COL11A1-202ENST00000358392 UBA5Q9GZZ9 404 aa13.1□□□□□ -0.31
COL11A1-202ENST00000358392 ZHX1Q9UKY1 873 aaPredicted RBP13.1□□□□□ -0.31
COL11A1-202ENST00000358392 GSTTP1A0A1W2PQM5 241 aa13.1□□□□□ -0.31
COL11A1-202ENST00000358392 PTPN14Q15678 1187 aa13.1□□□□□ -0.31
COL11A1-202ENST00000358392 ABTB2Q8N961 1025 aa13.1□□□□□ -0.31
COL11A1-202ENST00000358392 BMP2KQ9NSY1 1161 aaPredicted RBP13.1□□□□□ -0.31
COL11A1-202ENST00000358392 BLOC1S2Q6QNY1 142 aa13.09□□□□□ -0.31
COL11A1-202ENST00000358392 SPA17Q15506 151 aa13.09□□□□□ -0.31
COL11A1-202ENST00000358392 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.09□□□□□ -0.31
COL11A1-202ENST00000358392 CCDC7Q96M83 1385 aa13.09□□□□□ -0.31
COL11A1-202ENST00000358392 GTF2F1P35269 517 aaKnown RBP eCLIP13.09□□□□□ -0.31
COL11A1-202ENST00000358392 XPCQ01831 940 aaPredicted RBP13.09□□□□□ -0.31
COL11A1-202ENST00000358392 CPLX3Q8WVH0 158 aa13.09□□□□□ -0.31
COL11A1-202ENST00000358392 STAMBPO95630 424 aa13.08□□□□□ -0.31
COL11A1-202ENST00000358392 DDX54Q8TDD1 881 aaKnown RBP13.08□□□□□ -0.31
COL11A1-202ENST00000358392 UBAC1Q9BSL1 405 aa13.08□□□□□ -0.31
COL11A1-202ENST00000358392 GUCY1B3Q02153 619 aa13.08□□□□□ -0.32
COL11A1-202ENST00000358392 MAP3K11Q16584 847 aa13.08□□□□□ -0.32
COL11A1-202ENST00000358392 FERMT3Q86UX7 667 aa13.08□□□□□ -0.32
COL11A1-202ENST00000358392 IL1RAPL2Q9NP60 686 aa13.08□□□□□ -0.32
COL11A1-202ENST00000358392 LUZP1Q86V48 1076 aa13.08□□□□□ -0.32
COL11A1-202ENST00000358392 ZBTB9Q96C00 473 aa13.08□□□□□ -0.32
COL11A1-202ENST00000358392 TMCO5BA8MYB1 307 aa13.08□□□□□ -0.32
COL11A1-202ENST00000358392 KIF4BQ2VIQ3 1234 aa13.08□□□□□ -0.32
COL11A1-202ENST00000358392 CHD1LQ86WJ1 897 aa13.07□□□□□ -0.32
COL11A1-202ENST00000358392 CCDC83Q8IWF9 413 aa13.07□□□□□ -0.32
COL11A1-202ENST00000358392 MIA2Q96PC5 1412 aa13.07□□□□□ -0.32
COL11A1-202ENST00000358392 KIF5CO60282 957 aa13.07□□□□□ -0.32
COL11A1-202ENST00000358392 ATP2C2O75185 946 aa13.07□□□□□ -0.32
COL11A1-202ENST00000358392 HDGFL1Q5TGJ6 251 aa13.07□□□□□ -0.32
COL11A1-202ENST00000358392 NUTM1Q86Y26 1132 aa13.07□□□□□ -0.32
COL11A1-202ENST00000358392 CACNA2D4Q7Z3S7 1137 aa13.06□□□□□ -0.32
COL11A1-202ENST00000358392 MPHOSPH8Q99549 860 aa13.06□□□□□ -0.32
COL11A1-202ENST00000358392 MCM4P33991 863 aa13.06□□□□□ -0.32
COL11A1-202ENST00000358392 LIG1P18858 919 aa13.06□□□□□ -0.32
COL11A1-202ENST00000358392 SMC1AQ14683 1233 aaKnown RBP13.06□□□□□ -0.32
COL11A1-202ENST00000358392 CDKL5O76039 1030 aa13.05□□□□□ -0.32
COL11A1-202ENST00000358392 PRKCSHP14314 528 aaPredicted RBP13.05□□□□□ -0.32
COL11A1-202ENST00000358392 CABP4P57796 275 aa13.05□□□□□ -0.32
COL11A1-202ENST00000358392 BICDL1Q6ZP65 573 aa13.05□□□□□ -0.32
COL11A1-202ENST00000358392 ESCO1Q5FWF5 840 aa13.05□□□□□ -0.32
COL11A1-202ENST00000358392 C16orf45Q96MC5 204 aaPredicted RBP13.05□□□□□ -0.32
COL11A1-202ENST00000358392 FAM107BQ9H098 131 aa13.05□□□□□ -0.32
COL11A1-202ENST00000358392 AAMPQ13685 434 aa13.05□□□□□ -0.32
COL11A1-202ENST00000358392 NUP88Q99567 741 aaPredicted RBP13.05□□□□□ -0.32
COL11A1-202ENST00000358392 LARP6Q9BRS8 491 aaKnown RBP13.05□□□□□ -0.32
COL11A1-202ENST00000358392 POTEJP0CG39 1038 aa13.05□□□□□ -0.32
COL11A1-202ENST00000358392 BAZ1AQ9NRL2 1556 aaPredicted RBP13.05□□□□□ -0.32
COL11A1-202ENST00000358392 GAS2L2Q8NHY3 880 aa13.05□□□□□ -0.32
COL11A1-202ENST00000358392 CLIP2Q9UDT6 1046 aa13.05□□□□□ -0.32
COL11A1-202ENST00000358392 MAP9Q49MG5 647 aa13.04□□□□□ -0.32
COL11A1-202ENST00000358392 SCLT1Q96NL6 688 aa13.04□□□□□ -0.32
COL11A1-202ENST00000358392 PPP4R3BQ5MIZ7 849 aa13.04□□□□□ -0.32
COL11A1-202ENST00000358392 LARP1Q6PKG0 1096 aaKnown RBP13.04□□□□□ -0.32
COL11A1-202ENST00000358392 TRMT1LQ7Z2T5 733 aaKnown RBP13.04□□□□□ -0.32
COL11A1-202ENST00000358392 SFPQP23246 707 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL11A1-202ENST00000358392 IDH1O75874 414 aaKnown RBP13.04□□□□□ -0.32
COL11A1-202ENST00000358392 PLEKHO1Q53GL0 409 aaPredicted RBP13.04□□□□□ -0.32
COL11A1-202ENST00000358392 COMMD10Q9Y6G5 202 aa13.04□□□□□ -0.32
COL11A1-202ENST00000358392 CCDC82Q8N4S0 544 aa13.04□□□□□ -0.32
COL11A1-202ENST00000358392 LRP2BPQ9P2M1 347 aa13.04□□□□□ -0.32
COL11A1-202ENST00000358392 HLTFQ14527 1009 aaKnown RBP eCLIP13.04□□□□□ -0.32
COL11A1-202ENST00000358392 BACH2Q9BYV9 841 aa13.04□□□□□ -0.32
COL11A1-202ENST00000358392 CECR2Q9BXF3 1484 aa13.03□□□□□ -0.32
COL11A1-202ENST00000358392 GCOM1H8Y6P7 765 aaPredicted RBP13.03□□□□□ -0.32
COL11A1-202ENST00000358392 MYZAPP0CAP1 466 aa13.03□□□□□ -0.32
COL11A1-202ENST00000358392 ISM2Q6H9L7 571 aa13.03□□□□□ -0.32
COL11A1-202ENST00000358392 GBP3Q9H0R5 595 aa13.03□□□□□ -0.32
COL11A1-202ENST00000358392 SRGAP3O43295 1099 aa13.03□□□□□ -0.32
COL11A1-202ENST00000358392 TOP1P11387 765 aaKnown RBP13.03□□□□□ -0.32
COL11A1-202ENST00000358392 ZNF526Q8TF50 670 aaPredicted RBP13.03□□□□□ -0.32
COL11A1-202ENST00000358392 MYCNP04198 464 aaPredicted RBP13.03□□□□□ -0.32
COL11A1-202ENST00000358392 PPP2R1AP30153 589 aa13.03□□□□□ -0.32
COL11A1-202ENST00000358392 KIF18AQ8NI77 898 aa13.03□□□□□ -0.32
COL11A1-202ENST00000358392 PRPF4BQ13523 1007 aaKnown RBP13.03□□□□□ -0.32
COL11A1-202ENST00000358392 IMMTQ16891 758 aaKnown RBP13.03□□□□□ -0.32
COL11A1-202ENST00000358392 SPECC1Q5M775 1068 aa13.03□□□□□ -0.32
COL11A1-202ENST00000358392 CTR9Q6PD62 1173 aa13.03□□□□□ -0.32
COL11A1-202ENST00000358392 SMARCA5O60264 1052 aaPredicted RBP13.03□□□□□ -0.32
COL11A1-202ENST00000358392 FKBP15Q5T1M5 1219 aa13.03□□□□□ -0.32
COL11A1-202ENST00000358392 ZSCAN30Q86W11 494 aa13.03□□□□□ -0.32
COL11A1-202ENST00000358392 CKAP2LQ8IYA6 745 aa13.02□□□□□ -0.32
COL11A1-202ENST00000358392 TDRD12Q587J7 1177 aaKnown RBP13.02□□□□□ -0.32
COL11A1-202ENST00000358392 ZSCAN12O43309 604 aa13.02□□□□□ -0.33
COL11A1-202ENST00000358392 SPTY2D1Q68D10 685 aaPredicted RBP13.02□□□□□ -0.33
COL11A1-202ENST00000358392 ZSCAN25Q6NSZ9 544 aa13.02□□□□□ -0.33
COL11A1-202ENST00000358392 CEP131Q9UPN4 1083 aa13.02□□□□□ -0.33
COL11A1-202ENST00000358392 CETN2P41208 172 aa13.02□□□□□ -0.33
COL11A1-202ENST00000358392 LMAN1P49257 510 aa13.02□□□□□ -0.33
COL11A1-202ENST00000358392 CCT4P50991 539 aaKnown RBP13.02□□□□□ -0.33
COL11A1-202ENST00000358392 SULT6B1Q6IMI4 303 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms