RNA–Protein interactions for RNA: ENST00000358184.6

CTSE-201, Transcript of cathepsin E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSE, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSE-201ENST00000358184 MPNDQ8N594 471 aa13.01□□□□□ -0.33
CTSE-201ENST00000358184 PLEKHH1Q9ULM0 1364 aa13.01□□□□□ -0.33
CTSE-201ENST00000358184 NINLQ9Y2I6 1382 aa13.01□□□□□ -0.33
CTSE-201ENST00000358184 TULP4Q9NRJ4 1543 aa13.01□□□□□ -0.33
CTSE-201ENST00000358184 CCDC172P0C7W6 258 aa13.01□□□□□ -0.33
CTSE-201ENST00000358184 SAFB2Q14151 953 aaKnown RBP eCLIP13.01□□□□□ -0.33
CTSE-201ENST00000358184 SMC4Q9NTJ3 1288 aa13.01□□□□□ -0.33
CTSE-201ENST00000358184 XRN1Q8IZH2 1706 aaKnown RBP13□□□□□ -0.33
CTSE-201ENST00000358184 MINK1Q8N4C8 1332 aaPredicted RBP13□□□□□ -0.33
CTSE-201ENST00000358184 ZNF521Q96K83 1311 aa13□□□□□ -0.33
CTSE-201ENST00000358184 NBPF9Q3BBW0 867 aa13□□□□□ -0.33
CTSE-201ENST00000358184 C20orf194Q5TEA3 1177 aa13□□□□□ -0.33
CTSE-201ENST00000358184 DUSP27Q5VZP5 1158 aa13□□□□□ -0.33
CTSE-201ENST00000358184 ZNF710Q8N1W2 664 aa13□□□□□ -0.33
CTSE-201ENST00000358184 CALCOCO1Q9P1Z2 691 aa13□□□□□ -0.33
CTSE-201ENST00000358184 ADAMTS8Q9UP79 889 aa13□□□□□ -0.33
CTSE-201ENST00000358184 MCM4P33991 863 aa12.99□□□□□ -0.33
CTSE-201ENST00000358184 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.99□□□□□ -0.33
CTSE-201ENST00000358184 RNF217Q8TC41 542 aa12.99□□□□□ -0.33
CTSE-201ENST00000358184 ANTXR1Q9H6X2 564 aa12.99□□□□□ -0.33
CTSE-201ENST00000358184 TRAK2O60296 914 aa12.98□□□□□ -0.33
CTSE-201ENST00000358184 HSPA2P54652 639 aa12.98□□□□□ -0.33
CTSE-201ENST00000358184 MFAP1P55081 439 aaKnown RBP12.98□□□□□ -0.33
CTSE-201ENST00000358184 FAM161AQ3B820 660 aa12.98□□□□□ -0.33
CTSE-201ENST00000358184 KCNA6P17658 529 aa12.98□□□□□ -0.33
CTSE-201ENST00000358184 ATAD2Q6PL18 1390 aa12.98□□□□□ -0.33
CTSE-201ENST00000358184 MAFGO15525 162 aa12.97□□□□□ -0.33
CTSE-201ENST00000358184 PPP2R1AP30153 589 aa12.97□□□□□ -0.33
CTSE-201ENST00000358184 SKAP1Q86WV1 359 aa12.97□□□□□ -0.33
CTSE-201ENST00000358184 MYRIPQ8NFW9 859 aa12.97□□□□□ -0.33
CTSE-201ENST00000358184 CDK19Q9BWU1 502 aa12.97□□□□□ -0.33
CTSE-201ENST00000358184 NOL7Q9UMY1 257 aaKnown RBP12.97□□□□□ -0.33
CTSE-201ENST00000358184 CHD2O14647 1828 aaKnown RBP12.97□□□□□ -0.33
CTSE-201ENST00000358184 WASLO00401 505 aaPredicted RBP12.97□□□□□ -0.33
CTSE-201ENST00000358184 SRPK2P78362 688 aaKnown RBP12.97□□□□□ -0.33
CTSE-201ENST00000358184 WDR43Q15061 677 aaKnown RBP eCLIP12.97□□□□□ -0.33
CTSE-201ENST00000358184 CC2D2BQ6DHV5 1058 aa12.97□□□□□ -0.33
CTSE-201ENST00000358184 FEZ2Q9UHY8 353 aaPredicted RBP12.97□□□□□ -0.33
CTSE-201ENST00000358184 ADGRB2O60241 1585 aa12.97□□□□□ -0.33
CTSE-201ENST00000358184 VIRMAQ69YN4 1812 aaKnown RBP12.96□□□□□ -0.33
CTSE-201ENST00000358184 GTF2A1P52655 376 aaPredicted RBP12.96□□□□□ -0.33
CTSE-201ENST00000358184 GOLGA2Q08379 1002 aa12.96□□□□□ -0.33
CTSE-201ENST00000358184 C8orf34Q49A92 452 aa12.96□□□□□ -0.33
CTSE-201ENST00000358184 CABP2Q9NPB3 220 aa12.96□□□□□ -0.33
CTSE-201ENST00000358184 KNSTRNQ9Y448 316 aa12.96□□□□□ -0.34
CTSE-201ENST00000358184 MYOM1P52179 1685 aa12.95□□□□□ -0.34
CTSE-201ENST00000358184 NPC1L1Q9UHC9 1359 aa12.95□□□□□ -0.34
CTSE-201ENST00000358184 NWD1Q149M9 1564 aa12.95□□□□□ -0.34
CTSE-201ENST00000358184 NOP2P46087 812 aaKnown RBP12.95□□□□□ -0.34
CTSE-201ENST00000358184 NBPF10Q6P3W6 841 aaKnown RBP12.95□□□□□ -0.34
CTSE-201ENST00000358184 GTF2F1P35269 517 aaKnown RBP eCLIP12.94□□□□□ -0.34
CTSE-201ENST00000358184 XPCQ01831 940 aaPredicted RBP12.94□□□□□ -0.34
CTSE-201ENST00000358184 CTR9Q6PD62 1173 aa12.94□□□□□ -0.34
CTSE-201ENST00000358184 KIF16BQ96L93 1317 aa12.94□□□□□ -0.34
CTSE-201ENST00000358184 TNNT3P45378 269 aaPredicted RBP12.94□□□□□ -0.34
CTSE-201ENST00000358184 SLFN5Q08AF3 891 aa12.94□□□□□ -0.34
CTSE-201ENST00000358184 SLFN14P0C7P3 912 aa12.93□□□□□ -0.34
CTSE-201ENST00000358184 MCM5P33992 734 aa12.93□□□□□ -0.34
CTSE-201ENST00000358184 TRMT2AQ8IZ69 625 aaKnown RBP12.93□□□□□ -0.34
CTSE-201ENST00000358184 FEZ1Q99689 392 aa12.93□□□□□ -0.34
CTSE-201ENST00000358184 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.93□□□□□ -0.34
CTSE-201ENST00000358184 NKTRP30414 1462 aaKnown RBP12.93□□□□□ -0.34
CTSE-201ENST00000358184 SPDYE4A6NLX3 237 aa12.93□□□□□ -0.34
CTSE-201ENST00000358184 OTUD6BQ8N6M0 293 aa12.92□□□□□ -0.34
CTSE-201ENST00000358184 ZNF526Q8TF50 670 aaPredicted RBP12.92□□□□□ -0.34
CTSE-201ENST00000358184 SGSM3Q96HU1 749 aa12.92□□□□□ -0.34
CTSE-201ENST00000358184 SLC12A5Q9H2X9 1139 aa12.92□□□□□ -0.34
CTSE-201ENST00000358184 BRMS1Q9HCU9 246 aa12.92□□□□□ -0.34
CTSE-201ENST00000358184 STRCQ7RTU9 1775 aa12.92□□□□□ -0.34
CTSE-201ENST00000358184 SLKQ9H2G2 1235 aaPredicted RBP12.92□□□□□ -0.34
CTSE-201ENST00000358184 ANKRD36BQ8N2N9 1353 aa12.91□□□□□ -0.34
CTSE-201ENST00000358184 DONSONQ9NYP3 566 aa12.91□□□□□ -0.34
CTSE-201ENST00000358184 DMRT2Q9Y5R5 561 aa12.91□□□□□ -0.34
CTSE-201ENST00000358184 TERF2IPQ9NYB0 399 aa12.9□□□□□ -0.34
CTSE-201ENST00000358184 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.9□□□□□ -0.34
CTSE-201ENST00000358184 GAS2L3Q86XJ1 694 aa12.9□□□□□ -0.34
CTSE-201ENST00000358184 NUDT16Q96DE0 195 aaKnown RBP12.9□□□□□ -0.34
CTSE-201ENST00000358184 PRIMPOLQ96LW4 560 aa12.9□□□□□ -0.34
CTSE-201ENST00000358184 BSDC1Q9NW68 430 aaPredicted RBP12.9□□□□□ -0.34
CTSE-201ENST00000358184 OGFRQ9NZT2 677 aa12.9□□□□□ -0.34
CTSE-201ENST00000358184 CCDC61Q9Y6R9 512 aa12.9□□□□□ -0.34
CTSE-201ENST00000358184 SSR1P43307 286 aaKnown RBP12.89□□□□□ -0.35
CTSE-201ENST00000358184 NBPF6Q5VWK0 638 aa12.89□□□□□ -0.35
CTSE-201ENST00000358184 ICE2Q659A1 982 aa12.89□□□□□ -0.35
CTSE-201ENST00000358184 NBPF5PQ86XG9 351 aaPredicted RBP12.89□□□□□ -0.35
CTSE-201ENST00000358184 NBPF4Q96M43 638 aa12.89□□□□□ -0.35
CTSE-201ENST00000358184 CARD14Q9BXL6 1004 aa12.89□□□□□ -0.35
CTSE-201ENST00000358184 RBM28Q9NW13 759 aaKnown RBP12.89□□□□□ -0.35
CTSE-201ENST00000358184 DHX16O60231 1041 aaKnown RBP12.89□□□□□ -0.35
CTSE-201ENST00000358184 PDCL2Q8N4E4 241 aa12.89□□□□□ -0.35
CTSE-201ENST00000358184 ADGRL3Q9HAR2 1447 aa12.88□□□□□ -0.35
CTSE-201ENST00000358184 NCOA3Q9Y6Q9 1424 aa12.88□□□□□ -0.35
CTSE-201ENST00000358184 ATP7BP35670 1465 aa12.88□□□□□ -0.35
CTSE-201ENST00000358184 KIF1CO43896 1103 aaKnown RBP12.88□□□□□ -0.35
CTSE-201ENST00000358184 GUCY2CP25092 1073 aa12.88□□□□□ -0.35
CTSE-201ENST00000358184 HMGN5P82970 282 aaKnown RBP12.88□□□□□ -0.35
CTSE-201ENST00000358184 ZKSCAN8Q15776 578 aaPredicted RBP12.88□□□□□ -0.35
CTSE-201ENST00000358184 CABP1Q9NZU7 370 aa12.88□□□□□ -0.35
CTSE-201ENST00000358184 DDX11L8A8MPP1 907 aa12.88□□□□□ -0.35
CTSE-201ENST00000358184 SPINK5Q9NQ38 1064 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms