RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 MAP2P11137 1827 aaKnown RBP18.37■□□□□ 0.53
NIPAL3-203ENST00000358028 AAMPQ13685 434 aa18.36■□□□□ 0.53
NIPAL3-203ENST00000358028 PANK1Q8TE04 598 aa18.35■□□□□ 0.53
NIPAL3-203ENST00000358028 DDRGK1Q96HY6 314 aa18.35■□□□□ 0.53
NIPAL3-203ENST00000358028 FRAT1Q92837 279 aaPredicted RBP18.35■□□□□ 0.53
NIPAL3-203ENST00000358028 POLKQ9UBT6 870 aa18.35■□□□□ 0.53
NIPAL3-203ENST00000358028 TRIM35Q9UPQ4 493 aa18.35■□□□□ 0.53
NIPAL3-203ENST00000358028 CAMTA1Q9Y6Y1 1673 aa18.34■□□□□ 0.53
NIPAL3-203ENST00000358028 CT47B1P0C2W7 299 aaPredicted RBP18.34■□□□□ 0.53
NIPAL3-203ENST00000358028 BTG4Q9NY30 223 aa18.34■□□□□ 0.53
NIPAL3-203ENST00000358028 IL16Q14005 1332 aa18.34■□□□□ 0.53
NIPAL3-203ENST00000358028 GLI3P10071 1580 aa18.33■□□□□ 0.53
NIPAL3-203ENST00000358028 UNC5CLQ8IV45 518 aa18.33■□□□□ 0.53
NIPAL3-203ENST00000358028 KCNH5Q8NCM2 988 aa18.33■□□□□ 0.53
NIPAL3-203ENST00000358028 COG6Q9Y2V7 657 aa18.33■□□□□ 0.53
NIPAL3-203ENST00000358028 ZBTB7CA1YPR0 619 aa18.32■□□□□ 0.52
NIPAL3-203ENST00000358028 CLUAP1Q96AJ1 413 aa18.32■□□□□ 0.52
NIPAL3-203ENST00000358028 FCHSD2O94868 740 aa18.32■□□□□ 0.52
NIPAL3-203ENST00000358028 COG3Q96JB2 828 aa18.32■□□□□ 0.52
NIPAL3-203ENST00000358028 AATKQ6ZMQ8 1374 aa18.31■□□□□ 0.52
NIPAL3-203ENST00000358028 GJD4Q96KN9 370 aaPredicted RBP18.31■□□□□ 0.52
NIPAL3-203ENST00000358028 RIPK4P57078 832 aa18.3■□□□□ 0.52
NIPAL3-203ENST00000358028 FAM161AQ3B820 660 aa18.3■□□□□ 0.52
NIPAL3-203ENST00000358028 NPM2Q86SE8 214 aaKnown RBP18.3■□□□□ 0.52
NIPAL3-203ENST00000358028 TSR2Q969E8 191 aaKnown RBP18.3■□□□□ 0.52
NIPAL3-203ENST00000358028 ARHGEF25Q86VW2 580 aa18.3■□□□□ 0.52
NIPAL3-203ENST00000358028 BCL2L13Q9BXK5 485 aa18.3■□□□□ 0.52
NIPAL3-203ENST00000358028 RSPH6AQ9H0K4 717 aa18.3■□□□□ 0.52
NIPAL3-203ENST00000358028 ABCC6O95255 1503 aa18.29■□□□□ 0.52
NIPAL3-203ENST00000358028 COL5A2P05997 1499 aaPredicted RBP18.29■□□□□ 0.52
NIPAL3-203ENST00000358028 PPM1GO15355 546 aaPredicted RBP18.29■□□□□ 0.52
NIPAL3-203ENST00000358028 FBLN1P23142 703 aa18.29■□□□□ 0.52
NIPAL3-203ENST00000358028 IGHDP01880 384 aa18.28■□□□□ 0.52
NIPAL3-203ENST00000358028 EXOSC9Q06265 439 aaKnown RBP18.28■□□□□ 0.52
NIPAL3-203ENST00000358028 PEAK1Q9H792 1746 aa18.27■□□□□ 0.52
NIPAL3-203ENST00000358028 TNNQ9UQP3 1299 aa18.27■□□□□ 0.52
NIPAL3-203ENST00000358028 EMILIN1Q9Y6C2 1016 aa18.27■□□□□ 0.52
NIPAL3-203ENST00000358028 RLBP1P12271 317 aa18.27■□□□□ 0.51
NIPAL3-203ENST00000358028 PRKAR2BP31323 418 aa18.27■□□□□ 0.51
NIPAL3-203ENST00000358028 STRN4Q9NRL3 753 aa18.27■□□□□ 0.51
NIPAL3-203ENST00000358028 AXIN2Q9Y2T1 843 aa18.27■□□□□ 0.51
NIPAL3-203ENST00000358028 VIRMAQ69YN4 1812 aaKnown RBP18.26■□□□□ 0.51
NIPAL3-203ENST00000358028 NEFMP07197 916 aa18.26■□□□□ 0.51
NIPAL3-203ENST00000358028 VPS72Q15906 364 aa18.26■□□□□ 0.51
NIPAL3-203ENST00000358028 BRWD3Q6RI45 1802 aa18.26■□□□□ 0.51
NIPAL3-203ENST00000358028 IL13P35225 146 aa18.25■□□□□ 0.51
NIPAL3-203ENST00000358028 ZKSCAN2Q63HK3 967 aa18.25■□□□□ 0.51
NIPAL3-203ENST00000358028 WNK3Q9BYP7 1800 aa18.25■□□□□ 0.51
NIPAL3-203ENST00000358028 CCDC9Q9Y3X0 531 aaKnown RBP18.25■□□□□ 0.51
NIPAL3-203ENST00000358028 RGPD2P0DJD1 1756 aa18.24■□□□□ 0.51
NIPAL3-203ENST00000358028 RGS3P49796 1198 aa18.24■□□□□ 0.51
NIPAL3-203ENST00000358028 RTL5Q5HYW3 569 aaPredicted RBP18.24■□□□□ 0.51
NIPAL3-203ENST00000358028 MAP3K19Q56UN5 1328 aa18.23■□□□□ 0.51
NIPAL3-203ENST00000358028 C8orf34Q49A92 452 aa18.23■□□□□ 0.51
NIPAL3-203ENST00000358028 SMC4Q9NTJ3 1288 aa18.23■□□□□ 0.51
NIPAL3-203ENST00000358028 NBR1Q14596 966 aa18.22■□□□□ 0.51
NIPAL3-203ENST00000358028 RRS1Q15050 365 aaKnown RBP18.22■□□□□ 0.51
NIPAL3-203ENST00000358028 NFE2L2Q16236 605 aa18.22■□□□□ 0.51
NIPAL3-203ENST00000358028 LARP1Q6PKG0 1096 aaKnown RBP18.22■□□□□ 0.51
NIPAL3-203ENST00000358028 USP35Q9P2H5 1018 aa18.22■□□□□ 0.51
NIPAL3-203ENST00000358028 SPATA31A5Q5VU36 1347 aa18.22■□□□□ 0.51
NIPAL3-203ENST00000358028 SPATA31A7Q8IWB4 1347 aa18.22■□□□□ 0.51
NIPAL3-203ENST00000358028 HMOX1P09601 288 aa18.22■□□□□ 0.51
NIPAL3-203ENST00000358028 EVA1CP58658 441 aa18.22■□□□□ 0.51
NIPAL3-203ENST00000358028 MVPQ14764 893 aaKnown RBP18.22■□□□□ 0.51
NIPAL3-203ENST00000358028 DZIP1LQ8IYY4 767 aaKnown RBP18.22■□□□□ 0.51
NIPAL3-203ENST00000358028 FAM208AQ9UK61 1670 aaKnown RBP18.21■□□□□ 0.51
NIPAL3-203ENST00000358028 THSD7AQ9UPZ6 1657 aa18.21■□□□□ 0.51
NIPAL3-203ENST00000358028 SSH1Q8WYL5 1049 aa18.21■□□□□ 0.51
NIPAL3-203ENST00000358028 ONECUT3O60422 494 aaPredicted RBP18.2■□□□□ 0.5
NIPAL3-203ENST00000358028 SPATA31A1Q5TZJ5 1347 aa18.2■□□□□ 0.5
NIPAL3-203ENST00000358028 DEKP35659 375 aaKnown RBP18.19■□□□□ 0.5
NIPAL3-203ENST00000358028 CRB1P82279 1406 aa18.19■□□□□ 0.5
NIPAL3-203ENST00000358028 FTSJ3Q8IY81 847 aaKnown RBP18.19■□□□□ 0.5
NIPAL3-203ENST00000358028 PHACTR3Q96KR7 559 aa18.19■□□□□ 0.5
NIPAL3-203ENST00000358028 PCDHB15Q9Y5E8 787 aa18.19■□□□□ 0.5
NIPAL3-203ENST00000358028 WDR17Q8IZU2 1322 aa18.19■□□□□ 0.5
NIPAL3-203ENST00000358028 RTL1A6NKG5 1358 aa18.18■□□□□ 0.5
NIPAL3-203ENST00000358028 DLG5Q8TDM6 1919 aa18.18■□□□□ 0.5
NIPAL3-203ENST00000358028 CALD1Q05682 793 aaKnown RBP18.18■□□□□ 0.5
NIPAL3-203ENST00000358028 ERBB3P21860 1342 aa18.18■□□□□ 0.5
NIPAL3-203ENST00000358028 HOXC9P31274 260 aa18.17■□□□□ 0.5
NIPAL3-203ENST00000358028 IP6K1Q92551 441 aa18.17■□□□□ 0.5
NIPAL3-203ENST00000358028 TRIM27P14373 513 aa18.17■□□□□ 0.5
NIPAL3-203ENST00000358028 AMPHP49418 695 aa18.17■□□□□ 0.5
NIPAL3-203ENST00000358028 FAM98CQ17RN3 349 aaKnown RBP18.17■□□□□ 0.5
NIPAL3-203ENST00000358028 ALDH1L2Q3SY69 923 aa18.17■□□□□ 0.5
NIPAL3-203ENST00000358028 SEPT12Q8IYM1 358 aa18.17■□□□□ 0.5
NIPAL3-203ENST00000358028 ATF7IPQ6VMQ6 1270 aa18.16■□□□□ 0.5
NIPAL3-203ENST00000358028 RWDD1Q9H446 243 aaPredicted RBP18.16■□□□□ 0.5
NIPAL3-203ENST00000358028 KIF16BQ96L93 1317 aa18.16■□□□□ 0.5
NIPAL3-203ENST00000358028 PARP4Q9UKK3 1724 aaKnown RBP18.16■□□□□ 0.5
NIPAL3-203ENST00000358028 CSB-PGBD3P0DP91 1061 aa18.15■□□□□ 0.5
NIPAL3-203ENST00000358028 TOM1L2Q6ZVM7 507 aa18.15■□□□□ 0.5
NIPAL3-203ENST00000358028 NOB1Q9ULX3 412 aaKnown RBP18.15■□□□□ 0.5
NIPAL3-203ENST00000358028 FLT4P35916 1363 aa18.15■□□□□ 0.5
NIPAL3-203ENST00000358028 ANKRD24Q8TF21 1146 aa18.14■□□□□ 0.5
NIPAL3-203ENST00000358028 LRRC37A3O60309 1634 aa18.14■□□□□ 0.49
NIPAL3-203ENST00000358028 LMOD3Q0VAK6 560 aa18.14■□□□□ 0.49
NIPAL3-203ENST00000358028 ZNF428Q96B54 188 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms