RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 CRB1P82279 1406 aa22.16■■□□□ 1.14
TPM1-205ENST00000357980 WDR17Q8IZU2 1322 aa22.16■■□□□ 1.14
TPM1-205ENST00000357980 PLEKHG2Q9H7P9 1386 aa22.16■■□□□ 1.14
TPM1-205ENST00000357980 CSB-PGBD3P0DP91 1061 aa22.15■■□□□ 1.14
TPM1-205ENST00000357980 GNAI1P63096 354 aa22.15■■□□□ 1.14
TPM1-205ENST00000357980 CFAP44Q96MT7 982 aa22.15■■□□□ 1.14
TPM1-205ENST00000357980 GNAT3A8MTJ3 354 aa22.14■■□□□ 1.13
TPM1-205ENST00000357980 VIRMAQ69YN4 1812 aaKnown RBP22.14■■□□□ 1.13
TPM1-205ENST00000357980 MEGF6O75095 1541 aa22.14■■□□□ 1.13
TPM1-205ENST00000357980 CT47B1P0C2W7 299 aaPredicted RBP22.13■■□□□ 1.13
TPM1-205ENST00000357980 AMOTQ4VCS5 1084 aa22.13■■□□□ 1.13
TPM1-205ENST00000357980 RTF1Q92541 710 aaKnown RBP22.13■■□□□ 1.13
TPM1-205ENST00000357980 PKD1L3Q7Z443 1732 aa22.13■■□□□ 1.13
TPM1-205ENST00000357980 EXOSC9Q06265 439 aaKnown RBP22.13■■□□□ 1.13
TPM1-205ENST00000357980 MBIPQ9NS73 344 aa22.13■■□□□ 1.13
TPM1-205ENST00000357980 PLEKHO1Q53GL0 409 aaPredicted RBP22.12■■□□□ 1.13
TPM1-205ENST00000357980 LAS1LQ9Y4W2 734 aaKnown RBP22.12■■□□□ 1.13
TPM1-205ENST00000357980 PARP4Q9UKK3 1724 aaKnown RBP22.11■■□□□ 1.13
TPM1-205ENST00000357980 ERICH6BQ5W0A0 696 aa22.1■■□□□ 1.13
TPM1-205ENST00000357980 PLCH1Q4KWH8 1693 aa22.1■■□□□ 1.13
TPM1-205ENST00000357980 ADAMTS7Q9UKP4 1686 aa22.1■■□□□ 1.13
TPM1-205ENST00000357980 RARSP54136 660 aaKnown RBP22.1■■□□□ 1.13
TPM1-205ENST00000357980 RAPGEF4Q8WZA2 1011 aa22.1■■□□□ 1.13
TPM1-205ENST00000357980 CEMIPQ8WUJ3 1361 aa22.1■■□□□ 1.13
TPM1-205ENST00000357980 CHL1O00533 1208 aa22.09■■□□□ 1.13
TPM1-205ENST00000357980 ZNF530Q6P9A1 599 aaPredicted RBP22.09■■□□□ 1.13
TPM1-205ENST00000357980 IL17REQ8NFR9 667 aa22.09■■□□□ 1.13
TPM1-205ENST00000357980 BCAR3O75815 825 aa22.08■■□□□ 1.13
TPM1-205ENST00000357980 AKAP4Q5JQC9 854 aa22.08■■□□□ 1.13
TPM1-205ENST00000357980 PLIN1O60240 522 aa22.08■■□□□ 1.12
TPM1-205ENST00000357980 TOM1L2Q6ZVM7 507 aa22.07■■□□□ 1.12
TPM1-205ENST00000357980 CARD10Q9BWT7 1032 aa22.07■■□□□ 1.12
TPM1-205ENST00000357980 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.07■■□□□ 1.125e-8■■■■□ 19.9
TPM1-205ENST00000357980 OVOS2A0A0G2JMS6 1433 aa22.07■■□□□ 1.12
TPM1-205ENST00000357980 TATP17735 454 aaPredicted RBP22.06■■□□□ 1.12
TPM1-205ENST00000357980 LARP1Q6PKG0 1096 aaKnown RBP22.06■■□□□ 1.12
TPM1-205ENST00000357980 BTG4Q9NY30 223 aa22.06■■□□□ 1.12
TPM1-205ENST00000357980 NRAPQ86VF7 1730 aa22.05■■□□□ 1.12
TPM1-205ENST00000357980 STRN4Q9NRL3 753 aa22.05■■□□□ 1.12
TPM1-205ENST00000357980 SIPA1L3O60292 1781 aaPredicted RBP22.04■■□□□ 1.12
TPM1-205ENST00000357980 SCN11AQ9UI33 1791 aa22.04■■□□□ 1.12
TPM1-205ENST00000357980 EVA1CP58658 441 aa22.03■■□□□ 1.12
TPM1-205ENST00000357980 C1orf141Q5JVX7 400 aa22.03■■□□□ 1.12
TPM1-205ENST00000357980 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.03■■□□□ 1.12
TPM1-205ENST00000357980 JCADQ9P266 1359 aa22.03■■□□□ 1.12
TPM1-205ENST00000357980 SHANK3Q9BYB0 1731 aa22.02■■□□□ 1.12
TPM1-205ENST00000357980 NWD2Q9ULI1 1742 aa22.02■■□□□ 1.12
TPM1-205ENST00000357980 TSPYL6Q8N831 410 aa22.02■■□□□ 1.12
TPM1-205ENST00000357980 SPG7Q9UQ90 795 aa22.02■■□□□ 1.12
TPM1-205ENST00000357980 KDM3BQ7LBC6 1761 aa22.02■■□□□ 1.11
TPM1-205ENST00000357980 ZNF428Q96B54 188 aa22.01■■□□□ 1.11
TPM1-205ENST00000357980 LGR6Q9HBX8 967 aa22.01■■□□□ 1.11
TPM1-205ENST00000357980 VAMP4O75379 141 aa22.01■■□□□ 1.11
TPM1-205ENST00000357980 C8orf58Q8NAV2 365 aa22.01■■□□□ 1.11
TPM1-205ENST00000357980 BABAM1Q9NWV8 329 aa22.01■■□□□ 1.11
TPM1-205ENST00000357980 ADAMTS2O95450 1211 aa22■■□□□ 1.11
TPM1-205ENST00000357980 C20orf194Q5TEA3 1177 aa22■■□□□ 1.11
TPM1-205ENST00000357980 TSPYL4Q9UJ04 414 aa22■■□□□ 1.11
TPM1-205ENST00000357980 WNK3Q9BYP7 1800 aa21.99■■□□□ 1.11
TPM1-205ENST00000357980 TAF7Q15545 349 aaPredicted RBP21.99■■□□□ 1.11
TPM1-205ENST00000357980 MPRIPQ6WCQ1 1025 aa21.99■■□□□ 1.11
TPM1-205ENST00000357980 SSH1Q8WYL5 1049 aa21.99■■□□□ 1.11
TPM1-205ENST00000357980 BCL2L13Q9BXK5 485 aa21.99■■□□□ 1.11
TPM1-205ENST00000357980 MIS18AQ9NYP9 233 aa21.99■■□□□ 1.11
TPM1-205ENST00000357980 RNMTO43148 476 aaKnown RBP21.99■■□□□ 1.11
TPM1-205ENST00000357980 PHKG2P15735 406 aa21.99■■□□□ 1.11
TPM1-205ENST00000357980 TWISTNBQ3B726 338 aaPredicted RBP21.99■■□□□ 1.11
TPM1-205ENST00000357980 KDM6AO15550 1401 aaPredicted RBP21.98■■□□□ 1.11
TPM1-205ENST00000357980 NUTM2BA6NNL0 878 aaPredicted RBP21.98■■□□□ 1.11
TPM1-205ENST00000357980 NUTM2EB1AL46 878 aaPredicted RBP21.98■■□□□ 1.11
TPM1-205ENST00000357980 ALDH1L2Q3SY69 923 aa21.98■■□□□ 1.11
TPM1-205ENST00000357980 NUTM2AQ8IVF1 878 aaPredicted RBP21.98■■□□□ 1.11
TPM1-205ENST00000357980 SLIT2O94813 1529 aa21.97■■□□□ 1.11
TPM1-205ENST00000357980 IL2RBP14784 551 aa21.97■■□□□ 1.11
TPM1-205ENST00000357980 CYP27B1O15528 508 aa21.96■■□□□ 1.11
TPM1-205ENST00000357980 SMC4Q9NTJ3 1288 aa21.96■■□□□ 1.11
TPM1-205ENST00000357980 KRT24Q2M2I5 525 aa21.96■■□□□ 1.11
TPM1-205ENST00000357980 IFNL2Q8IZJ0 200 aa21.96■■□□□ 1.11
TPM1-205ENST00000357980 PPP4R2Q9NY27 417 aa21.96■■□□□ 1.11
TPM1-205ENST00000357980 DISP2A7MBM2 1401 aa21.95■■□□□ 1.1
TPM1-205ENST00000357980 MRC1P22897 1456 aa21.95■■□□□ 1.1
TPM1-205ENST00000357980 ELL2O00472 640 aaPredicted RBP21.95■■□□□ 1.1
TPM1-205ENST00000357980 BRPF1P55201 1214 aaPredicted RBP21.95■■□□□ 1.1
TPM1-205ENST00000357980 EXOC6Q8TAG9 804 aa21.95■■□□□ 1.1
TPM1-205ENST00000357980 TEFQ10587 303 aa21.94■■□□□ 1.1
TPM1-205ENST00000357980 PDE3AQ14432 1141 aa21.94■■□□□ 1.1
TPM1-205ENST00000357980 ZCRB1Q8TBF4 217 aaKnown RBP21.93■■□□□ 1.1
TPM1-205ENST00000357980 FRAT1Q92837 279 aaPredicted RBP21.93■■□□□ 1.1
TPM1-205ENST00000357980 CRBNQ96SW2 442 aa21.93■■□□□ 1.1
TPM1-205ENST00000357980 SPATA31A6Q5VVP1 1343 aa21.93■■□□□ 1.1
TPM1-205ENST00000357980 PCDH11XQ9BZA7 1347 aa21.93■■□□□ 1.1
TPM1-205ENST00000357980 PCDH11YQ9BZA8 1340 aa21.93■■□□□ 1.1
TPM1-205ENST00000357980 USP35Q9P2H5 1018 aa21.92■■□□□ 1.1
TPM1-205ENST00000357980 LRP6O75581 1613 aa21.92■■□□□ 1.1
TPM1-205ENST00000357980 CANXP27824 592 aaKnown RBP21.92■■□□□ 1.1
TPM1-205ENST00000357980 KIF16BQ96L93 1317 aa21.91■■□□□ 1.1
TPM1-205ENST00000357980 HSPA1LP34931 641 aa21.91■■□□□ 1.1
TPM1-205ENST00000357980 DCAF5Q96JK2 942 aa21.91■■□□□ 1.1
TPM1-205ENST00000357980 HSP90AB1P08238 724 aaKnown RBP21.9■■□□□ 1.1
TPM1-205ENST00000357980 MRPL50Q8N5N7 158 aaKnown RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms