RNA–Protein interactions for RNA: ENST00000357896.7

IFT20-202, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best) BASIC

Gene IFT20, Length 974 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-202ENST00000357896 EDC4Q6P2E9 1401 aaKnown RBP22.57■■□□□ 1.2
IFT20-202ENST00000357896 CD163L1Q9NR16 1453 aa22.56■■□□□ 1.2
IFT20-202ENST00000357896 LTV1Q96GA3 475 aaPredicted RBP22.56■■□□□ 1.2
IFT20-202ENST00000357896 COL23A1Q86Y22 540 aaPredicted RBP22.54■■□□□ 1.2
IFT20-202ENST00000357896 ZCRB1Q8TBF4 217 aaKnown RBP22.54■■□□□ 1.2
IFT20-202ENST00000357896 SLC12A5Q9H2X9 1139 aa22.54■■□□□ 1.2
IFT20-202ENST00000357896 GPBP1L1Q9HC44 474 aaPredicted RBP22.54■■□□□ 1.2
IFT20-202ENST00000357896 CD2APQ9Y5K6 639 aa22.53■■□□□ 1.2
IFT20-202ENST00000357896 ATP10DQ9P241 1426 aa22.53■■□□□ 1.2
IFT20-202ENST00000357896 USP47Q96K76 1375 aa22.52■■□□□ 1.2
IFT20-202ENST00000357896 FAM208AQ9UK61 1670 aaKnown RBP22.52■■□□□ 1.2
IFT20-202ENST00000357896 NSD2O96028 1365 aa22.51■■□□□ 1.19
IFT20-202ENST00000357896 TUBGCP6Q96RT7 1819 aa22.51■■□□□ 1.19
IFT20-202ENST00000357896 LY75O60449 1722 aa22.51■■□□□ 1.19
IFT20-202ENST00000357896 FLAD1Q8NFF5 587 aa22.5■■□□□ 1.19
IFT20-202ENST00000357896 SIN3AQ96ST3 1273 aa22.49■■□□□ 1.19
IFT20-202ENST00000357896 HSPA6P17066 643 aa22.48■■□□□ 1.19
IFT20-202ENST00000357896 AMPHP49418 695 aa22.48■■□□□ 1.19
IFT20-202ENST00000357896 NEUROD1Q13562 356 aa22.48■■□□□ 1.19
IFT20-202ENST00000357896 MSL1Q68DK7 614 aa22.48■■□□□ 1.19
IFT20-202ENST00000357896 PUS7Q96PZ0 661 aaKnown RBP22.48■■□□□ 1.19
IFT20-202ENST00000357896 A0A1W2PP64 1363 aa22.48■■□□□ 1.19
IFT20-202ENST00000357896 HOXC9P31274 260 aa22.47■■□□□ 1.19
IFT20-202ENST00000357896 COG3Q96JB2 828 aa22.47■■□□□ 1.19
IFT20-202ENST00000357896 DOT1LQ8TEK3 1739 aa22.47■■□□□ 1.19
IFT20-202ENST00000357896 CGNL1Q0VF96 1302 aa22.47■■□□□ 1.19
IFT20-202ENST00000357896 CARD11Q9BXL7 1154 aa22.46■■□□□ 1.19
IFT20-202ENST00000357896 MAP3K19Q56UN5 1328 aa22.46■■□□□ 1.19
IFT20-202ENST00000357896 ADCY9O60503 1353 aa22.42■■□□□ 1.18
IFT20-202ENST00000357896 MEGF6O75095 1541 aa22.41■■□□□ 1.18
IFT20-202ENST00000357896 ZNF526Q8TF50 670 aaPredicted RBP22.41■■□□□ 1.18
IFT20-202ENST00000357896 RAPGEF4Q8WZA2 1011 aa22.41■■□□□ 1.18
IFT20-202ENST00000357896 NBPF6Q5VWK0 638 aa22.39■■□□□ 1.17
IFT20-202ENST00000357896 NBPF4Q96M43 638 aa22.39■■□□□ 1.17
IFT20-202ENST00000357896 RTL1A6NKG5 1358 aa22.38■■□□□ 1.17
IFT20-202ENST00000357896 TATP17735 454 aaPredicted RBP22.37■■□□□ 1.17
IFT20-202ENST00000357896 FBLN1P23142 703 aa22.37■■□□□ 1.17
IFT20-202ENST00000357896 PALLDQ8WX93 1383 aa22.37■■□□□ 1.17
IFT20-202ENST00000357896 C5P01031 1676 aa22.36■■□□□ 1.17
IFT20-202ENST00000357896 PCDH11XQ9BZA7 1347 aa22.36■■□□□ 1.17
IFT20-202ENST00000357896 PCDH11YQ9BZA8 1340 aa22.36■■□□□ 1.17
IFT20-202ENST00000357896 SLC24A1O60721 1099 aa22.36■■□□□ 1.17
IFT20-202ENST00000357896 MPRIPQ6WCQ1 1025 aa22.36■■□□□ 1.17
IFT20-202ENST00000357896 SMARCC1Q92922 1105 aaPredicted RBP22.36■■□□□ 1.17
IFT20-202ENST00000357896 AK7Q96M32 723 aa22.36■■□□□ 1.17
IFT20-202ENST00000357896 SMG6Q86US8 1419 aaKnown RBP22.36■■□□□ 1.17
IFT20-202ENST00000357896 IGSF1Q8N6C5 1336 aa22.35■■□□□ 1.17
IFT20-202ENST00000357896 NSD3Q9BZ95 1437 aa22.34■■□□□ 1.17
IFT20-202ENST00000357896 USHBP1Q8N6Y0 703 aa22.33■■□□□ 1.17
IFT20-202ENST00000357896 RGPD2P0DJD1 1756 aa22.33■■□□□ 1.16
IFT20-202ENST00000357896 RRS1Q15050 365 aaKnown RBP22.32■■□□□ 1.16
IFT20-202ENST00000357896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.3■■□□□ 1.16
IFT20-202ENST00000357896 KIF3CO14782 793 aa22.3■■□□□ 1.16
IFT20-202ENST00000357896 APLP1P51693 650 aa22.3■■□□□ 1.16
IFT20-202ENST00000357896 PHF14O94880 888 aa22.29■■□□□ 1.16
IFT20-202ENST00000357896 SSFA2P28290 1259 aa22.29■■□□□ 1.16
IFT20-202ENST00000357896 C4BP0C0L5 1744 aa22.28■■□□□ 1.16
IFT20-202ENST00000357896 WWC3Q9ULE0 1092 aa22.28■■□□□ 1.16
IFT20-202ENST00000357896 TAF1LQ8IZX4 1826 aa22.28■■□□□ 1.16
IFT20-202ENST00000357896 INSRP06213 1382 aa22.27■■□□□ 1.16
IFT20-202ENST00000357896 CYP27B1O15528 508 aa22.27■■□□□ 1.16
IFT20-202ENST00000357896 FYB1O15117 783 aa22.26■■□□□ 1.15
IFT20-202ENST00000357896 HSP90AB2PQ58FF8 381 aa22.26■■□□□ 1.15
IFT20-202ENST00000357896 AMIGO3Q86WK7 504 aa22.26■■□□□ 1.15
IFT20-202ENST00000357896 TESK2Q96S53 571 aa22.26■■□□□ 1.15
IFT20-202ENST00000357896 TOMM70O94826 608 aa22.25■■□□□ 1.15
IFT20-202ENST00000357896 GGNBP2Q9H3C7 697 aa22.25■■□□□ 1.15
IFT20-202ENST00000357896 KIF24Q5T7B8 1368 aa22.25■■□□□ 1.15
IFT20-202ENST00000357896 ST20-MTHFSA0A0A6YYL1 179 aa22.24■■□□□ 1.15
IFT20-202ENST00000357896 PIGBQ92521 554 aa22.24■■□□□ 1.15
IFT20-202ENST00000357896 LOC102724428A0A0B4J2F2 783 aa22.23■■□□□ 1.15
IFT20-202ENST00000357896 SIK1P57059 783 aa22.23■■□□□ 1.15
IFT20-202ENST00000357896 FLT4P35916 1363 aa22.23■■□□□ 1.15
IFT20-202ENST00000357896 NKX1-1Q15270 411 aaPredicted RBP22.22■■□□□ 1.15
IFT20-202ENST00000357896 SMIM5Q71RC9 77 aa22.21■■□□□ 1.15
IFT20-202ENST00000357896 SPG7Q9UQ90 795 aa22.21■■□□□ 1.15
IFT20-202ENST00000357896 UBR3Q6ZT12 1888 aa22.21■■□□□ 1.15
IFT20-202ENST00000357896 TOGARAM1Q9Y4F4 1720 aa22.2■■□□□ 1.14
IFT20-202ENST00000357896 TGFB2P61812 414 aa22.2■■□□□ 1.14
IFT20-202ENST00000357896 DNAJC5GQ8N7S2 189 aa22.2■■□□□ 1.14
IFT20-202ENST00000357896 LINC00116Q8NCU8 138 aa22.2■■□□□ 1.14
IFT20-202ENST00000357896 TONSLQ96HA7 1378 aa22.2■■□□□ 1.14
IFT20-202ENST00000357896 GNPATO15228 680 aa22.19■■□□□ 1.14
IFT20-202ENST00000357896 CICQ96RK0 1608 aaPredicted RBP22.19■■□□□ 1.14
IFT20-202ENST00000357896 MMP10P09238 476 aa22.18■■□□□ 1.14
IFT20-202ENST00000357896 TMOD3Q9NYL9 352 aa22.18■■□□□ 1.14
IFT20-202ENST00000357896 ITGB4P16144 1822 aa22.17■■□□□ 1.14
IFT20-202ENST00000357896 ATP6V1AP38606 617 aa22.17■■□□□ 1.14
IFT20-202ENST00000357896 BCS1LQ9Y276 419 aa22.17■■□□□ 1.14
IFT20-202ENST00000357896 NLGN1Q8N2Q7 840 aa22.16■■□□□ 1.14
IFT20-202ENST00000357896 ARHGAP27Q6ZUM4 889 aa22.15■■□□□ 1.14
IFT20-202ENST00000357896 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.15■■□□□ 1.14
IFT20-202ENST00000357896 TMF1P82094 1093 aa22.14■■□□□ 1.13
IFT20-202ENST00000357896 ITPK1Q13572 414 aa22.14■■□□□ 1.13
IFT20-202ENST00000357896 TRAPPC3LQ5T215 181 aa22.14■■□□□ 1.13
IFT20-202ENST00000357896 ASAP1Q9ULH1 1129 aa22.14■■□□□ 1.13
IFT20-202ENST00000357896 PXDNLA1KZ92 1463 aa22.14■■□□□ 1.13
IFT20-202ENST00000357896 A0A0G2JLW4 131 aa22.13■■□□□ 1.13
IFT20-202ENST00000357896 RTCBQ9Y3I0 505 aaKnown RBP22.13■■□□□ 1.13
IFT20-202ENST00000357896 PKD1L3Q7Z443 1732 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms