RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 ZNF397Q8NF99 534 aaPredicted RBP12.36□□□□□ -0.43
FXR1-202ENST00000357559 GNAI2P04899 355 aa12.36□□□□□ -0.43
FXR1-202ENST00000357559 GPATCH11Q8N954 259 aa12.36□□□□□ -0.43
FXR1-202ENST00000357559 ABCF2Q9UG63 623 aa12.36□□□□□ -0.43
FXR1-202ENST00000357559 BCAR3O75815 825 aa12.35□□□□□ -0.43
FXR1-202ENST00000357559 TXLNBQ8N3L3 684 aa12.35□□□□□ -0.43
FXR1-202ENST00000357559 CCDC148Q8NFR7 591 aa12.35□□□□□ -0.43
FXR1-202ENST00000357559 ZBTB9Q96C00 473 aa12.35□□□□□ -0.43
FXR1-202ENST00000357559 MTERF4Q7Z6M4 381 aaKnown RBP12.35□□□□□ -0.43
FXR1-202ENST00000357559 CASQ1P31415 396 aa12.35□□□□□ -0.43
FXR1-202ENST00000357559 SPTY2D1Q68D10 685 aaPredicted RBP12.35□□□□□ -0.43
FXR1-202ENST00000357559 CBFA2T2O43439 604 aa12.35□□□□□ -0.43
FXR1-202ENST00000357559 GRM1Q13255 1194 aa12.35□□□□□ -0.43
FXR1-202ENST00000357559 CFAP100Q494V2 611 aa12.35□□□□□ -0.43
FXR1-202ENST00000357559 ARL1P40616 181 aaPredicted RBP12.35□□□□□ -0.43
FXR1-202ENST00000357559 TSR2Q969E8 191 aaKnown RBP12.35□□□□□ -0.43
FXR1-202ENST00000357559 PRKRIP1Q9H875 184 aaPredicted RBP12.35□□□□□ -0.43
FXR1-202ENST00000357559 HOMER2Q9NSB8 354 aa12.35□□□□□ -0.43
FXR1-202ENST00000357559 RAD54L2Q9Y4B4 1467 aa12.35□□□□□ -0.43
FXR1-202ENST00000357559 SLC4A2P04920 1241 aa12.35□□□□□ -0.43
FXR1-202ENST00000357559 CTNNA2P26232 953 aa12.35□□□□□ -0.43
FXR1-202ENST00000357559 APBB1IPQ7Z5R6 666 aaPredicted RBP12.35□□□□□ -0.43
FXR1-202ENST00000357559 IDH1O75874 414 aaKnown RBP12.34□□□□□ -0.43
FXR1-202ENST00000357559 CCDC82Q8N4S0 544 aa12.34□□□□□ -0.43
FXR1-202ENST00000357559 ZNF354CQ86Y25 554 aa12.34□□□□□ -0.43
FXR1-202ENST00000357559 MINDY4BA8MYZ0 360 aa12.34□□□□□ -0.43
FXR1-202ENST00000357559 MMRN2Q9H8L6 949 aa12.34□□□□□ -0.43
FXR1-202ENST00000357559 VPS8Q8N3P4 1428 aa12.34□□□□□ -0.43
FXR1-202ENST00000357559 ARHGAP29Q52LW3 1261 aa12.34□□□□□ -0.43
FXR1-202ENST00000357559 SEC63Q9UGP8 760 aaKnown RBP12.34□□□□□ -0.43
FXR1-202ENST00000357559 LARP1Q6PKG0 1096 aaKnown RBP12.34□□□□□ -0.43
FXR1-202ENST00000357559 JAKMIP1Q96N16 626 aaKnown RBP12.34□□□□□ -0.43
FXR1-202ENST00000357559 UPF3BQ9BZI7 483 aaKnown RBP12.34□□□□□ -0.43
FXR1-202ENST00000357559 POLR3GO15318 223 aaPredicted RBP12.34□□□□□ -0.43
FXR1-202ENST00000357559 PPP4R3AQ6IN85 833 aa12.34□□□□□ -0.43
FXR1-202ENST00000357559 FERMT2Q96AC1 680 aa12.34□□□□□ -0.43
FXR1-202ENST00000357559 MBD3O95983 291 aa12.33□□□□□ -0.44
FXR1-202ENST00000357559 PUF60Q9UHX1 559 aaKnown RBP12.33□□□□□ -0.44
FXR1-202ENST00000357559 IPO4Q8TEX9 1081 aaKnown RBP12.33□□□□□ -0.44
FXR1-202ENST00000357559 XPCQ01831 940 aaPredicted RBP12.33□□□□□ -0.44
FXR1-202ENST00000357559 GUCY1B3Q02153 619 aa12.33□□□□□ -0.44
FXR1-202ENST00000357559 C11orf95C9JLR9 678 aaPredicted RBP12.33□□□□□ -0.44
FXR1-202ENST00000357559 CBX1P83916 185 aa12.33□□□□□ -0.44
FXR1-202ENST00000357559 CRACR2AQ9BSW2 395 aa12.33□□□□□ -0.44
FXR1-202ENST00000357559 PDZRN3Q9UPQ7 1066 aa12.33□□□□□ -0.44
FXR1-202ENST00000357559 CACNA2D4Q7Z3S7 1137 aa12.33□□□□□ -0.44
FXR1-202ENST00000357559 USP8P40818 1118 aa12.32□□□□□ -0.44
FXR1-202ENST00000357559 KRT85P78386 507 aa12.32□□□□□ -0.44
FXR1-202ENST00000357559 CRACR2BQ8N4Y2 399 aaPredicted RBP12.32□□□□□ -0.44
FXR1-202ENST00000357559 PPM1EQ8WY54 764 aa12.32□□□□□ -0.44
FXR1-202ENST00000357559 PRPF4BQ13523 1007 aaKnown RBP12.32□□□□□ -0.44
FXR1-202ENST00000357559 PDRG1Q9NUG6 133 aa12.32□□□□□ -0.44
FXR1-202ENST00000357559 MIA2Q96PC5 1412 aa12.32□□□□□ -0.44
FXR1-202ENST00000357559 CASTP20810 708 aaKnown RBP12.32□□□□□ -0.44
FXR1-202ENST00000357559 SPA17Q15506 151 aa12.32□□□□□ -0.44
FXR1-202ENST00000357559 PLEKHO1Q53GL0 409 aaPredicted RBP12.32□□□□□ -0.44
FXR1-202ENST00000357559 LUZP1Q86V48 1076 aa12.32□□□□□ -0.44
FXR1-202ENST00000357559 CCDC150Q8NCX0 1101 aa12.32□□□□□ -0.44
FXR1-202ENST00000357559 POLR3DP05423 398 aaPredicted RBP12.31□□□□□ -0.44
FXR1-202ENST00000357559 MTHFSP49914 203 aa12.31□□□□□ -0.44
FXR1-202ENST00000357559 ANKIB1Q9P2G1 1089 aa12.31□□□□□ -0.44
FXR1-202ENST00000357559 TNIP1Q15025 636 aa12.31□□□□□ -0.44
FXR1-202ENST00000357559 HDGFL1Q5TGJ6 251 aa12.31□□□□□ -0.44
FXR1-202ENST00000357559 CCDC96Q2M329 555 aa12.31□□□□□ -0.44
FXR1-202ENST00000357559 GNAI3P08754 354 aa12.31□□□□□ -0.44
FXR1-202ENST00000357559 SHTN1A0MZ66 631 aa12.31□□□□□ -0.44
FXR1-202ENST00000357559 PPP1R12BO60237 982 aaPredicted RBP12.31□□□□□ -0.44
FXR1-202ENST00000357559 PRKAR2BP31323 418 aa12.31□□□□□ -0.44
FXR1-202ENST00000357559 HOOK3Q86VS8 718 aa12.31□□□□□ -0.44
FXR1-202ENST00000357559 CPLX3Q8WVH0 158 aa12.31□□□□□ -0.44
FXR1-202ENST00000357559 GPRASP1Q5JY77 1395 aa12.31□□□□□ -0.44
FXR1-202ENST00000357559 TATP17735 454 aaPredicted RBP12.31□□□□□ -0.44
FXR1-202ENST00000357559 LMAN1P49257 510 aa12.31□□□□□ -0.44
FXR1-202ENST00000357559 TWISTNBQ3B726 338 aaPredicted RBP12.31□□□□□ -0.44
FXR1-202ENST00000357559 ANKRD1Q15327 319 aa12.31□□□□□ -0.44
FXR1-202ENST00000357559 EXOSC9Q06265 439 aaKnown RBP12.3□□□□□ -0.44
FXR1-202ENST00000357559 CDCA7LQ96GN5 454 aa12.3□□□□□ -0.44
FXR1-202ENST00000357559 NUP62CLQ9H1M0 184 aa12.3□□□□□ -0.44
FXR1-202ENST00000357559 CNTLNQ9NXG0 1405 aa12.3□□□□□ -0.44
FXR1-202ENST00000357559 CETN2P41208 172 aa12.3□□□□□ -0.44
FXR1-202ENST00000357559 ZNF526Q8TF50 670 aaPredicted RBP12.3□□□□□ -0.44
FXR1-202ENST00000357559 IL1RAPL2Q9NP60 686 aa12.3□□□□□ -0.44
FXR1-202ENST00000357559 ATP2C2O75185 946 aa12.29□□□□□ -0.44
FXR1-202ENST00000357559 CCDC144CPQ8IYA2 1237 aa12.29□□□□□ -0.44
FXR1-202ENST00000357559 SYCE3A1L190 88 aa12.29□□□□□ -0.44
FXR1-202ENST00000357559 NUP88Q99567 741 aaPredicted RBP12.29□□□□□ -0.44
FXR1-202ENST00000357559 PABPN1LA6NDY0 278 aaKnown RBP12.29□□□□□ -0.44
FXR1-202ENST00000357559 PAIP2Q9BPZ3 127 aaKnown RBP12.29□□□□□ -0.44
FXR1-202ENST00000357559 ISM2Q6H9L7 571 aa12.29□□□□□ -0.44
FXR1-202ENST00000357559 MKNK2Q9HBH9 465 aa12.29□□□□□ -0.44
FXR1-202ENST00000357559 CECR2Q9BXF3 1484 aa12.29□□□□□ -0.44
FXR1-202ENST00000357559 BTBD11A6QL63 1104 aa12.29□□□□□ -0.44
FXR1-202ENST00000357559 BLOC1S2Q6QNY1 142 aa12.29□□□□□ -0.44
FXR1-202ENST00000357559 AIDAQ96BJ3 306 aa12.29□□□□□ -0.44
FXR1-202ENST00000357559 CDKL5O76039 1030 aa12.28□□□□□ -0.44
FXR1-202ENST00000357559 NUTM1Q86Y26 1132 aa12.28□□□□□ -0.44
FXR1-202ENST00000357559 ZWINTO95229 277 aa12.28□□□□□ -0.44
FXR1-202ENST00000357559 FAM107BQ9H098 131 aa12.28□□□□□ -0.44
FXR1-202ENST00000357559 GRPEL1Q9HAV7 217 aa12.28□□□□□ -0.44
FXR1-202ENST00000357559 ADAMTS8Q9UP79 889 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms