RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 PUS7Q96PZ0 661 aaKnown RBP10.07□□□□□ -0.8
CDC42SE1-201ENST00000357235 SDSP20132 328 aa10.06□□□□□ -0.8
CDC42SE1-201ENST00000357235 CSPP1Q1MSJ5 1256 aa10.06□□□□□ -0.8
CDC42SE1-201ENST00000357235 TTC22Q5TAA0 569 aa10.06□□□□□ -0.8
CDC42SE1-201ENST00000357235 FBXO31Q5XUX0 539 aaPredicted RBP10.06□□□□□ -0.8
CDC42SE1-201ENST00000357235 ZNF428Q96B54 188 aa10.06□□□□□ -0.8
CDC42SE1-201ENST00000357235 IFT57Q9NWB7 429 aa10.06□□□□□ -0.8
CDC42SE1-201ENST00000357235 GLI2P10070 1586 aa10.06□□□□□ -0.8
CDC42SE1-201ENST00000357235 MYO3AQ8NEV4 1616 aa10.06□□□□□ -0.8
CDC42SE1-201ENST00000357235 SYCE3A1L190 88 aa10.06□□□□□ -0.8
CDC42SE1-201ENST00000357235 NUTM2FA1L443 756 aa10.06□□□□□ -0.8
CDC42SE1-201ENST00000357235 ARHGAP45Q92619 1136 aa10.06□□□□□ -0.8
CDC42SE1-201ENST00000357235 USP26Q9BXU7 913 aa10.06□□□□□ -0.8
CDC42SE1-201ENST00000357235 RBSNQ9H1K0 784 aa10.06□□□□□ -0.8
CDC42SE1-201ENST00000357235 ADGRB2O60241 1585 aa10.06□□□□□ -0.8
CDC42SE1-201ENST00000357235 NCKAP5LQ9HCH0 1330 aa10.05□□□□□ -0.8
CDC42SE1-201ENST00000357235 AK9Q5TCS8 1911 aa10.05□□□□□ -0.8
CDC42SE1-201ENST00000357235 MIS18AQ9NYP9 233 aa10.05□□□□□ -0.8
CDC42SE1-201ENST00000357235 NEK4P51957 841 aa10.05□□□□□ -0.8
CDC42SE1-201ENST00000357235 MCM10Q7L590 875 aa10.05□□□□□ -0.8
CDC42SE1-201ENST00000357235 ZNF500O60304 480 aaPredicted RBP10.04□□□□□ -0.8
CDC42SE1-201ENST00000357235 PTMAP06454 111 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-201ENST00000357235 CFAP44Q96MT7 982 aa10.04□□□□□ -0.8
CDC42SE1-201ENST00000357235 MEIS3Q99687 375 aa10.04□□□□□ -0.8
CDC42SE1-201ENST00000357235 LMBRD1Q9NUN5 540 aa10.04□□□□□ -0.8
CDC42SE1-201ENST00000357235 ABCC4O15439 1325 aa10.04□□□□□ -0.8
CDC42SE1-201ENST00000357235 CBX1P83916 185 aa10.04□□□□□ -0.8
CDC42SE1-201ENST00000357235 DNTTIP2Q5QJE6 756 aaKnown RBP10.04□□□□□ -0.8
CDC42SE1-201ENST00000357235 SASS6Q6UVJ0 657 aa10.04□□□□□ -0.8
CDC42SE1-201ENST00000357235 DCTPP1Q9H773 170 aa10.04□□□□□ -0.8
CDC42SE1-201ENST00000357235 HS1BP3Q53T59 392 aa10.04□□□□□ -0.8
CDC42SE1-201ENST00000357235 AEBP1Q8IUX7 1158 aa10.04□□□□□ -0.8
CDC42SE1-201ENST00000357235 F6X3S4 739 aa10.03□□□□□ -0.8
CDC42SE1-201ENST00000357235 KLHL34Q8N239 644 aa10.03□□□□□ -0.8
CDC42SE1-201ENST00000357235 NOL7Q9UMY1 257 aaKnown RBP10.03□□□□□ -0.8
CDC42SE1-201ENST00000357235 COL3A1P02461 1466 aaPredicted RBP10.03□□□□□ -0.8
CDC42SE1-201ENST00000357235 REC8O95072 547 aa10.03□□□□□ -0.8
CDC42SE1-201ENST00000357235 LMOD3Q0VAK6 560 aa10.03□□□□□ -0.8
CDC42SE1-201ENST00000357235 SULT6B1Q6IMI4 303 aa10.03□□□□□ -0.8
CDC42SE1-201ENST00000357235 NECTIN2Q92692 538 aa10.03□□□□□ -0.8
CDC42SE1-201ENST00000357235 RILPL2Q969X0 211 aa10.03□□□□□ -0.8
CDC42SE1-201ENST00000357235 COG3Q96JB2 828 aa10.03□□□□□ -0.8
CDC42SE1-201ENST00000357235 NSFL1CQ9UNZ2 370 aaKnown RBP10.03□□□□□ -0.8
CDC42SE1-201ENST00000357235 TRIM6-TRIM34B2RNG4 842 aa10.02□□□□□ -0.8
CDC42SE1-201ENST00000357235 GPT2Q8TD30 523 aa10.02□□□□□ -0.8
CDC42SE1-201ENST00000357235 GDPD2Q9HCC8 539 aa10.02□□□□□ -0.8
CDC42SE1-201ENST00000357235 EXOC6BQ9Y2D4 811 aa10.02□□□□□ -0.8
CDC42SE1-201ENST00000357235 IFT172Q9UG01 1749 aa10.02□□□□□ -0.81
CDC42SE1-201ENST00000357235 LRRC7Q96NW7 1537 aa10.02□□□□□ -0.81
CDC42SE1-201ENST00000357235 SLC4A2P04920 1241 aa10.02□□□□□ -0.81
CDC42SE1-201ENST00000357235 IL13P35225 146 aa10.02□□□□□ -0.81
CDC42SE1-201ENST00000357235 SLC52A1Q9NWF4 448 aa10.02□□□□□ -0.81
CDC42SE1-201ENST00000357235 ARAP3Q8WWN8 1544 aa10.02□□□□□ -0.81
CDC42SE1-201ENST00000357235 NEURL4Q96JN8 1562 aa10.02□□□□□ -0.81
CDC42SE1-201ENST00000357235 YTHDC2Q9H6S0 1430 aaKnown RBP10.02□□□□□ -0.81
CDC42SE1-201ENST00000357235 BRPF1P55201 1214 aaPredicted RBP10.01□□□□□ -0.81
CDC42SE1-201ENST00000357235 MLECQ14165 292 aa10.01□□□□□ -0.81
CDC42SE1-201ENST00000357235 CEP85Q6P2H3 762 aa10.01□□□□□ -0.81
CDC42SE1-201ENST00000357235 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.01□□□□□ -0.81
CDC42SE1-201ENST00000357235 ANO2Q9NQ90 1003 aa10.01□□□□□ -0.81
CDC42SE1-201ENST00000357235 TMEM63CQ9P1W3 806 aa10.01□□□□□ -0.81
CDC42SE1-201ENST00000357235 KIDINS220Q9ULH0 1771 aa10.01□□□□□ -0.81
CDC42SE1-201ENST00000357235 ANKRD44Q8N8A2 993 aa10.01□□□□□ -0.81
CDC42SE1-201ENST00000357235 CGNQ9P2M7 1197 aaKnown RBP10.01□□□□□ -0.81
CDC42SE1-201ENST00000357235 PNPLA6Q8IY17 1366 aa10.01□□□□□ -0.81
CDC42SE1-201ENST00000357235 FAM135BQ49AJ0 1406 aa10.01□□□□□ -0.81
CDC42SE1-201ENST00000357235 CFAP74Q9C0B2 1584 aa10.01□□□□□ -0.81
CDC42SE1-201ENST00000357235 CAMSAP1Q5T5Y3 1602 aa10.01□□□□□ -0.81
CDC42SE1-201ENST00000357235 ERC2O15083 957 aa10.01□□□□□ -0.81
CDC42SE1-201ENST00000357235 ZNF445P59923 1031 aa10.01□□□□□ -0.81
CDC42SE1-201ENST00000357235 PLCB2Q00722 1185 aa10.01□□□□□ -0.81
CDC42SE1-201ENST00000357235 TXNDC2Q86VQ3 553 aa10.01□□□□□ -0.81
CDC42SE1-201ENST00000357235 UPF3BQ9BZI7 483 aaKnown RBP10.01□□□□□ -0.81
CDC42SE1-201ENST00000357235 ABCA9Q8IUA7 1624 aa10□□□□□ -0.81
CDC42SE1-201ENST00000357235 PPLO60437 1756 aa10□□□□□ -0.81
CDC42SE1-201ENST00000357235 CWC22Q9HCG8 908 aaKnown RBP10□□□□□ -0.81
CDC42SE1-201ENST00000357235 MED14O60244 1454 aa10□□□□□ -0.81
CDC42SE1-201ENST00000357235 ZNF853P0CG23 659 aa10□□□□□ -0.81
CDC42SE1-201ENST00000357235 RPAP2Q8IXW5 612 aaPredicted RBP10□□□□□ -0.81
CDC42SE1-201ENST00000357235 ZDHHC9Q9Y397 364 aa10□□□□□ -0.81
CDC42SE1-201ENST00000357235 PTCH1Q13635 1447 aa10□□□□□ -0.81
CDC42SE1-201ENST00000357235 USP32Q8NFA0 1604 aa10□□□□□ -0.81
CDC42SE1-201ENST00000357235 MSH6P52701 1360 aa9.99□□□□□ -0.81
CDC42SE1-201ENST00000357235 TMX3Q96JJ7 454 aa9.99□□□□□ -0.81
CDC42SE1-201ENST00000357235 ZC3H13Q5T200 1668 aaKnown RBP9.99□□□□□ -0.81
CDC42SE1-201ENST00000357235 CD163L1Q9NR16 1453 aa9.99□□□□□ -0.81
CDC42SE1-201ENST00000357235 ZFP91Q96JP5 570 aaPredicted RBP9.99□□□□□ -0.81
CDC42SE1-201ENST00000357235 DTNBO60941 627 aa9.99□□□□□ -0.81
CDC42SE1-201ENST00000357235 ABCC3O15438 1527 aa9.98□□□□□ -0.81
CDC42SE1-201ENST00000357235 LMTK2Q8IWU2 1503 aa9.98□□□□□ -0.81
CDC42SE1-201ENST00000357235 RIMS2Q9UQ26 1411 aa9.98□□□□□ -0.81
CDC42SE1-201ENST00000357235 ARHGEF28Q8N1W1 1705 aaKnown RBP9.98□□□□□ -0.81
CDC42SE1-201ENST00000357235 ZBTB22O15209 634 aa9.98□□□□□ -0.81
CDC42SE1-201ENST00000357235 HMMRO75330 724 aa9.98□□□□□ -0.81
CDC42SE1-201ENST00000357235 CLEC17AQ6ZS10 378 aa9.98□□□□□ -0.81
CDC42SE1-201ENST00000357235 LARP6Q9BRS8 491 aaKnown RBP9.98□□□□□ -0.81
CDC42SE1-201ENST00000357235 ZKSCAN5Q9Y2L8 839 aa9.98□□□□□ -0.81
CDC42SE1-201ENST00000357235 ZFYVE9O95405 1425 aa9.98□□□□□ -0.81
CDC42SE1-201ENST00000357235 POGZQ7Z3K3 1410 aa9.98□□□□□ -0.81
CDC42SE1-201ENST00000357235 CYP2E1P05181 493 aaPredicted RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms