RNA–Protein interactions for RNA: ENST00000356634.7

KDM1A-201, Transcript of lysine demethylase 1A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KDM1A, Length 3,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-201ENST00000356634 NUTM2FA1L443 756 aa21.62■■□□□ 1.05
KDM1A-201ENST00000356634 WAPLQ7Z5K2 1190 aa21.62■■□□□ 1.05
KDM1A-201ENST00000356634 GDPD2Q9HCC8 539 aa21.62■■□□□ 1.05
KDM1A-201ENST00000356634 LRRC7Q96NW7 1537 aa21.62■■□□□ 1.05
KDM1A-201ENST00000356634 POLKQ9UBT6 870 aa21.61■■□□□ 1.05
KDM1A-201ENST00000356634 MBD3O95983 291 aa21.61■■□□□ 1.05
KDM1A-201ENST00000356634 ZNF830Q96NB3 372 aaPredicted RBP21.61■■□□□ 1.05
KDM1A-201ENST00000356634 EMILIN1Q9Y6C2 1016 aa21.61■■□□□ 1.05
KDM1A-201ENST00000356634 PIK3R4Q99570 1358 aa21.6■■□□□ 1.05
KDM1A-201ENST00000356634 ERC2O15083 957 aa21.6■■□□□ 1.05
KDM1A-201ENST00000356634 MCM5P33992 734 aa21.6■■□□□ 1.05
KDM1A-201ENST00000356634 KIAA2012Q0VF49 1180 aa21.6■■□□□ 1.05
KDM1A-201ENST00000356634 JARID2Q92833 1246 aaPredicted RBP21.6■■□□□ 1.05
KDM1A-201ENST00000356634 TSPY26PQ9H489 355 aa21.6■■□□□ 1.05
KDM1A-201ENST00000356634 TMX3Q96JJ7 454 aa21.6■■□□□ 1.05
KDM1A-201ENST00000356634 KIDINS220Q9ULH0 1771 aa21.6■■□□□ 1.05
KDM1A-201ENST00000356634 TSC1Q92574 1164 aa21.59■■□□□ 1.05
KDM1A-201ENST00000356634 PPLO60437 1756 aa21.59■■□□□ 1.05
KDM1A-201ENST00000356634 KRT24Q2M2I5 525 aa21.59■■□□□ 1.05
KDM1A-201ENST00000356634 TSHZ3Q63HK5 1081 aa21.59■■□□□ 1.05
KDM1A-201ENST00000356634 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP21.58■■□□□ 1.05
KDM1A-201ENST00000356634 CDK19Q9BWU1 502 aa21.58■■□□□ 1.05
KDM1A-201ENST00000356634 NCKAP5LQ9HCH0 1330 aa21.58■■□□□ 1.04
KDM1A-201ENST00000356634 PLCB2Q00722 1185 aa21.58■■□□□ 1.04
KDM1A-201ENST00000356634 ANKRD44Q8N8A2 993 aa21.58■■□□□ 1.04
KDM1A-201ENST00000356634 PRDM4Q9UKN5 801 aa21.58■■□□□ 1.04
KDM1A-201ENST00000356634 MTERF4Q7Z6M4 381 aaKnown RBP21.57■■□□□ 1.04
KDM1A-201ENST00000356634 YEATS2Q9ULM3 1422 aa21.57■■□□□ 1.04
KDM1A-201ENST00000356634 FAM135BQ49AJ0 1406 aa21.57■■□□□ 1.04
KDM1A-201ENST00000356634 ABCA9Q8IUA7 1624 aa21.57■■□□□ 1.04
KDM1A-201ENST00000356634 CEP85Q6P2H3 762 aa21.56■■□□□ 1.04
KDM1A-201ENST00000356634 FAM69CQ0P6D2 419 aa21.56■■□□□ 1.04
KDM1A-201ENST00000356634 SYAP1Q96A49 352 aaPredicted RBP21.55■■□□□ 1.04
KDM1A-201ENST00000356634 MEIS3Q99687 375 aa21.55■■□□□ 1.04
KDM1A-201ENST00000356634 ZHX1Q9UKY1 873 aaPredicted RBP21.55■■□□□ 1.04
KDM1A-201ENST00000356634 PNPLA6Q8IY17 1366 aa21.55■■□□□ 1.04
KDM1A-201ENST00000356634 ARHGAP31Q2M1Z3 1444 aa21.55■■□□□ 1.04
KDM1A-201ENST00000356634 SOX12O15370 315 aa21.55■■□□□ 1.04
KDM1A-201ENST00000356634 SLC4A10Q6U841 1118 aa21.55■■□□□ 1.04
KDM1A-201ENST00000356634 ARHGEF28Q8N1W1 1705 aaKnown RBP21.55■■□□□ 1.04
KDM1A-201ENST00000356634 FAM177BA6PVY3 158 aa21.54■■□□□ 1.04
KDM1A-201ENST00000356634 RPAP2Q8IXW5 612 aaPredicted RBP21.54■■□□□ 1.04
KDM1A-201ENST00000356634 C17orf53Q8N3J3 647 aaPredicted RBP21.54■■□□□ 1.04
KDM1A-201ENST00000356634 ANO2Q9NQ90 1003 aa21.53■■□□□ 1.04
KDM1A-201ENST00000356634 USP25Q9UHP3 1055 aa21.53■■□□□ 1.04
KDM1A-201ENST00000356634 CAMSAP1Q5T5Y3 1602 aa21.53■■□□□ 1.04
KDM1A-201ENST00000356634 ZNF853P0CG23 659 aa21.53■■□□□ 1.04
KDM1A-201ENST00000356634 UPF3BQ9BZI7 483 aaKnown RBP21.53■■□□□ 1.04
KDM1A-201ENST00000356634 POGZQ7Z3K3 1410 aa21.52■■□□□ 1.04
KDM1A-201ENST00000356634 GADD45BO75293 160 aaPredicted RBP21.52■■□□□ 1.04
KDM1A-201ENST00000356634 LMOD3Q0VAK6 560 aa21.52■■□□□ 1.04
KDM1A-201ENST00000356634 RILPL2Q969X0 211 aa21.52■■□□□ 1.04
KDM1A-201ENST00000356634 ZRANB1Q9UGI0 708 aa21.52■■□□□ 1.04
KDM1A-201ENST00000356634 ARAP3Q8WWN8 1544 aa21.51■■□□□ 1.03
KDM1A-201ENST00000356634 TRIM6-TRIM34B2RNG4 842 aa21.51■■□□□ 1.03
KDM1A-201ENST00000356634 TTC12Q9H892 705 aaPredicted RBP21.51■■□□□ 1.03
KDM1A-201ENST00000356634 RRS1Q15050 365 aaKnown RBP21.5■■□□□ 1.03
KDM1A-201ENST00000356634 MSH6P52701 1360 aa21.5■■□□□ 1.03
KDM1A-201ENST00000356634 BRD1O95696 1058 aa21.5■■□□□ 1.03
KDM1A-201ENST00000356634 MCCP23508 829 aa21.5■■□□□ 1.03
KDM1A-201ENST00000356634 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.5■■□□□ 1.03
KDM1A-201ENST00000356634 PALD1Q9ULE6 856 aa21.5■■□□□ 1.03
KDM1A-201ENST00000356634 EXOC6BQ9Y2D4 811 aa21.5■■□□□ 1.03
KDM1A-201ENST00000356634 ZFYVE9O95405 1425 aa21.49■■□□□ 1.03
KDM1A-201ENST00000356634 PHF14O94880 888 aa21.49■■□□□ 1.03
KDM1A-201ENST00000356634 SMAP1Q8IYB5 467 aaPredicted RBP21.49■■□□□ 1.03
KDM1A-201ENST00000356634 REREQ9P2R6 1566 aa21.48■■□□□ 1.03
KDM1A-201ENST00000356634 CD163L1Q9NR16 1453 aa21.48■■□□□ 1.03
KDM1A-201ENST00000356634 PDE1AP54750 535 aa21.48■■□□□ 1.03
KDM1A-201ENST00000356634 HMMRO75330 724 aa21.47■■□□□ 1.03
KDM1A-201ENST00000356634 NME9Q86XW9 330 aa21.47■■□□□ 1.03
KDM1A-201ENST00000356634 CCDC94Q9BW85 323 aaPredicted RBP21.47■■□□□ 1.03
KDM1A-201ENST00000356634 KNDC1Q76NI1 1749 aa21.47■■□□□ 1.03
KDM1A-201ENST00000356634 IL13P35225 146 aa21.47■■□□□ 1.03
KDM1A-201ENST00000356634 USP48Q86UV5 1035 aa21.47■■□□□ 1.03
KDM1A-201ENST00000356634 ATP10DQ9P241 1426 aa21.47■■□□□ 1.03
KDM1A-201ENST00000356634 LMTK2Q8IWU2 1503 aa21.47■■□□□ 1.03
KDM1A-201ENST00000356634 CBX1P83916 185 aa21.47■■□□□ 1.03
KDM1A-201ENST00000356634 MYRIPQ8NFW9 859 aa21.47■■□□□ 1.03
KDM1A-201ENST00000356634 FRMPD1Q5SYB0 1578 aa21.47■■□□□ 1.03
KDM1A-201ENST00000356634 NOLC1Q14978 699 aaKnown RBP eCLIP21.46■■□□□ 1.035e-8■■■■□ 20
KDM1A-201ENST00000356634 RIMS2Q9UQ26 1411 aa21.46■■□□□ 1.03
KDM1A-201ENST00000356634 RTL1A6NKG5 1358 aa21.46■■□□□ 1.03
KDM1A-201ENST00000356634 YTHDC2Q9H6S0 1430 aaKnown RBP21.46■■□□□ 1.03
KDM1A-201ENST00000356634 F6X3S4 739 aa21.45■■□□□ 1.02
KDM1A-201ENST00000356634 HCLS1P14317 486 aaPredicted RBP21.45■■□□□ 1.02
KDM1A-201ENST00000356634 MCM2P49736 904 aa21.45■■□□□ 1.02
KDM1A-201ENST00000356634 MCM10Q7L590 875 aa21.45■■□□□ 1.02
KDM1A-201ENST00000356634 ADCY5O95622 1261 aa21.45■■□□□ 1.02
KDM1A-201ENST00000356634 SLC4A2P04920 1241 aa21.45■■□□□ 1.02
KDM1A-201ENST00000356634 TXNDC2Q86VQ3 553 aa21.44■■□□□ 1.02
KDM1A-201ENST00000356634 ESYT1Q9BSJ8 1104 aa21.44■■□□□ 1.02
KDM1A-201ENST00000356634 MIS18AQ9NYP9 233 aa21.43■■□□□ 1.02
KDM1A-201ENST00000356634 LARP6Q9BRS8 491 aaKnown RBP21.42■■□□□ 1.02
KDM1A-201ENST00000356634 ABCC3O15438 1527 aa21.42■■□□□ 1.02
KDM1A-201ENST00000356634 PIBF1Q8WXW3 757 aa21.42■■□□□ 1.02
KDM1A-201ENST00000356634 AEBP1Q8IUX7 1158 aa21.42■■□□□ 1.02
KDM1A-201ENST00000356634 HMGN5P82970 282 aaKnown RBP21.41■■□□□ 1.02
KDM1A-201ENST00000356634 KIF24Q5T7B8 1368 aa21.41■■□□□ 1.02
KDM1A-201ENST00000356634 NEXMIFQ5QGS0 1516 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms