RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 TDO2P48775 406 aa6.53□□□□□ -1.36
PTPRD-202ENST00000356435 PPFIBP1Q86W92 1011 aa6.53□□□□□ -1.36
PTPRD-202ENST00000356435 AEBP1Q8IUX7 1158 aa6.53□□□□□ -1.36
PTPRD-202ENST00000356435 CCDC181Q5TID7 509 aa6.53□□□□□ -1.36
PTPRD-202ENST00000356435 LNPKQ9C0E8 428 aa6.53□□□□□ -1.36
PTPRD-202ENST00000356435 GOLGA6L7A0A1B0GV03 622 aa6.53□□□□□ -1.36
PTPRD-202ENST00000356435 HDGFL1Q5TGJ6 251 aa6.53□□□□□ -1.36
PTPRD-202ENST00000356435 CTNNA3Q9UI47 895 aa6.53□□□□□ -1.36
PTPRD-202ENST00000356435 ARHGEF11O15085 1522 aa6.53□□□□□ -1.36
PTPRD-202ENST00000356435 MTHFSP49914 203 aa6.53□□□□□ -1.36
PTPRD-202ENST00000356435 BRPF1P55201 1214 aaPredicted RBP6.53□□□□□ -1.36
PTPRD-202ENST00000356435 JAKMIP3Q5VZ66 844 aa6.53□□□□□ -1.36
PTPRD-202ENST00000356435 SRCIN1Q9C0H9 1055 aa6.53□□□□□ -1.36
PTPRD-202ENST00000356435 CIZ1Q9ULV3 898 aaPredicted RBP6.53□□□□□ -1.36
PTPRD-202ENST00000356435 CBFA2T2O43439 604 aa6.53□□□□□ -1.36
PTPRD-202ENST00000356435 BICDL1Q6ZP65 573 aa6.53□□□□□ -1.36
PTPRD-202ENST00000356435 TRIM5Q9C035 493 aa6.53□□□□□ -1.36
PTPRD-202ENST00000356435 CYP46A1Q9Y6A2 500 aa6.53□□□□□ -1.36
PTPRD-202ENST00000356435 ZNF692Q9BU19 519 aaPredicted RBP6.52□□□□□ -1.37
PTPRD-202ENST00000356435 RTEL1-TNFRSF6BF6WH68 1400 aa6.52□□□□□ -1.37
PTPRD-202ENST00000356435 PRKAR2BP31323 418 aa6.52□□□□□ -1.37
PTPRD-202ENST00000356435 MBD3O95983 291 aa6.52□□□□□ -1.37
PTPRD-202ENST00000356435 CRACR2BQ8N4Y2 399 aaPredicted RBP6.52□□□□□ -1.37
PTPRD-202ENST00000356435 STARD3NLO95772 234 aa6.52□□□□□ -1.37
PTPRD-202ENST00000356435 DAPK1P53355 1430 aa6.52□□□□□ -1.37
PTPRD-202ENST00000356435 PRG4Q92954 1404 aaPredicted RBP6.52□□□□□ -1.37
PTPRD-202ENST00000356435 TWISTNBQ3B726 338 aaPredicted RBP6.52□□□□□ -1.37
PTPRD-202ENST00000356435 CCDC150Q8NCX0 1101 aa6.52□□□□□ -1.37
PTPRD-202ENST00000356435 IBSPP21815 317 aaPredicted RBP6.52□□□□□ -1.37
PTPRD-202ENST00000356435 TSPY26PQ9H489 355 aa6.52□□□□□ -1.37
PTPRD-202ENST00000356435 CUL5Q93034 780 aa6.51□□□□□ -1.37
PTPRD-202ENST00000356435 PRAM1Q96QH2 718 aa6.51□□□□□ -1.37
PTPRD-202ENST00000356435 MPHOSPH6Q99547 160 aaKnown RBP6.51□□□□□ -1.37
PTPRD-202ENST00000356435 SSBP05455 408 aaKnown RBP eCLIP6.51□□□□□ -1.37
PTPRD-202ENST00000356435 AXDND1Q5T1B0 1012 aaPredicted RBP6.51□□□□□ -1.37
PTPRD-202ENST00000356435 GCC1Q96CN9 775 aa6.51□□□□□ -1.37
PTPRD-202ENST00000356435 SLF2Q8IX21 1173 aa6.51□□□□□ -1.37
PTPRD-202ENST00000356435 KDM2BQ8NHM5 1336 aa6.51□□□□□ -1.37
PTPRD-202ENST00000356435 SERPINC1P01008 464 aa6.51□□□□□ -1.37
PTPRD-202ENST00000356435 CCDC112Q8NEF3 446 aa6.51□□□□□ -1.37
PTPRD-202ENST00000356435 AIDAQ96BJ3 306 aa6.51□□□□□ -1.37
PTPRD-202ENST00000356435 CETN2P41208 172 aa6.51□□□□□ -1.37
PTPRD-202ENST00000356435 SKIDA1Q1XH10 827 aa6.51□□□□□ -1.37
PTPRD-202ENST00000356435 SIL1Q9H173 461 aa6.51□□□□□ -1.37
PTPRD-202ENST00000356435 LRP2BPQ9P2M1 347 aa6.51□□□□□ -1.37
PTPRD-202ENST00000356435 LRRCC1Q9C099 1032 aa6.5□□□□□ -1.37
PTPRD-202ENST00000356435 TMEM132EQ6IEE7 984 aa6.5□□□□□ -1.37
PTPRD-202ENST00000356435 AACSQ86V21 672 aa6.5□□□□□ -1.37
PTPRD-202ENST00000356435 CEP57L1Q8IYX8 460 aa6.5□□□□□ -1.37
PTPRD-202ENST00000356435 TMOD3Q9NYL9 352 aa6.5□□□□□ -1.37
PTPRD-202ENST00000356435 ANKIB1Q9P2G1 1089 aa6.5□□□□□ -1.37
PTPRD-202ENST00000356435 CEP131Q9UPN4 1083 aa6.5□□□□□ -1.37
PTPRD-202ENST00000356435 DRC1Q96MC2 740 aa6.5□□□□□ -1.37
PTPRD-202ENST00000356435 BTBD11A6QL63 1104 aa6.5□□□□□ -1.37
PTPRD-202ENST00000356435 MYL6BP14649 208 aa6.5□□□□□ -1.37
PTPRD-202ENST00000356435 PANK1Q8TE04 598 aa6.5□□□□□ -1.37
PTPRD-202ENST00000356435 RPGRQ92834 1020 aaKnown RBP6.5□□□□□ -1.37
PTPRD-202ENST00000356435 BLMP54132 1417 aaPredicted RBP6.5□□□□□ -1.37
PTPRD-202ENST00000356435 CAVIN4Q5BKX8 364 aa6.5□□□□□ -1.37
PTPRD-202ENST00000356435 MRC2Q9UBG0 1479 aa6.5□□□□□ -1.37
PTPRD-202ENST00000356435 TSPYL1Q9H0U9 437 aa6.5□□□□□ -1.37
PTPRD-202ENST00000356435 ERLIN1O75477 346 aa6.5□□□□□ -1.37
PTPRD-202ENST00000356435 ME1P48163 572 aa6.5□□□□□ -1.37
PTPRD-202ENST00000356435 STK11IPQ8N1F8 1099 aa6.5□□□□□ -1.37
PTPRD-202ENST00000356435 SLC4A2P04920 1241 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 SSR1P43307 286 aaKnown RBP6.49□□□□□ -1.37
PTPRD-202ENST00000356435 USP5P45974 858 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 FKBP4Q02790 459 aaKnown RBP eCLIP6.49□□□□□ -1.37
PTPRD-202ENST00000356435 TAF4BQ92750 862 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 ATAD2Q6PL18 1390 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 CAMSAP2Q08AD1 1489 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 EPB41L2O43491 1005 aaKnown RBP6.49□□□□□ -1.37
PTPRD-202ENST00000356435 CT47B1P0C2W7 299 aaPredicted RBP6.49□□□□□ -1.37
PTPRD-202ENST00000356435 DNMBPQ6XZF7 1577 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 RAD54L2Q9Y4B4 1467 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 ESPNB1AK53 854 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 CHMP4BP1P59074 171 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 ANAPC15P60006 121 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 CDK19Q9BWU1 502 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 CCDC91Q7Z6B0 441 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 KCNH5Q8NCM2 988 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 AKAP2Q9Y2D5 859 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 KRT32Q14532 448 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 IMMTQ16891 758 aaKnown RBP6.49□□□□□ -1.37
PTPRD-202ENST00000356435 FMNL2Q96PY5 1086 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 CEP126Q9P2H0 1117 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 HS1BP3Q53T59 392 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 LEKR1Q6ZMV7 388 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 RPGRIP1LQ68CZ1 1315 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 IFT140Q96RY7 1462 aa6.49□□□□□ -1.37
PTPRD-202ENST00000356435 PABPN1LA6NDY0 278 aaKnown RBP6.49□□□□□ -1.37
PTPRD-202ENST00000356435 POLR3DP05423 398 aaPredicted RBP6.49□□□□□ -1.37
PTPRD-202ENST00000356435 NASPP49321 788 aaPredicted RBP6.49□□□□□ -1.37
PTPRD-202ENST00000356435 PHAXQ9H814 394 aaKnown RBP6.49□□□□□ -1.37
PTPRD-202ENST00000356435 CEBPZQ03701 1054 aaKnown RBP6.48□□□□□ -1.37
PTPRD-202ENST00000356435 TSG101Q99816 390 aa6.48□□□□□ -1.37
PTPRD-202ENST00000356435 NUP160Q12769 1436 aa6.48□□□□□ -1.37
PTPRD-202ENST00000356435 CCDC192P0DO97 292 aa6.48□□□□□ -1.37
PTPRD-202ENST00000356435 NEK4P51957 841 aa6.48□□□□□ -1.37
PTPRD-202ENST00000356435 DZIP1Q86YF9 867 aaKnown RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms