RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 ATF5Q9Y2D1 282 aaPredicted RBP14.79□□□□□ -0.04
CAPN3-204ENST00000356316 RTL1A6NKG5 1358 aa14.78□□□□□ -0.04
CAPN3-204ENST00000356316 RAPGEF4Q8WZA2 1011 aa14.78□□□□□ -0.04
CAPN3-204ENST00000356316 PDGFDQ9GZP0 370 aaPredicted RBP14.78□□□□□ -0.04
CAPN3-204ENST00000356316 BTAF1O14981 1849 aa14.78□□□□□ -0.04
CAPN3-204ENST00000356316 PRIM1P49642 420 aaKnown RBP14.77□□□□□ -0.05
CAPN3-204ENST00000356316 NBPF6Q5VWK0 638 aa14.77□□□□□ -0.05
CAPN3-204ENST00000356316 NBPF4Q96M43 638 aa14.77□□□□□ -0.05
CAPN3-204ENST00000356316 POLR3GLQ9BT43 218 aa14.77□□□□□ -0.05
CAPN3-204ENST00000356316 RGPD2P0DJD1 1756 aa14.77□□□□□ -0.05
CAPN3-204ENST00000356316 KIF20BQ96Q89 1820 aa14.76□□□□□ -0.05
CAPN3-204ENST00000356316 CASZ1Q86V15 1759 aa14.76□□□□□ -0.05
CAPN3-204ENST00000356316 CGNL1Q0VF96 1302 aa14.76□□□□□ -0.05
CAPN3-204ENST00000356316 SLC27A3Q5K4L6 730 aa14.76□□□□□ -0.05
CAPN3-204ENST00000356316 PPM1GO15355 546 aaPredicted RBP14.75□□□□□ -0.05
CAPN3-204ENST00000356316 TATP17735 454 aaPredicted RBP14.75□□□□□ -0.05
CAPN3-204ENST00000356316 HSP90AB2PQ58FF8 381 aa14.75□□□□□ -0.05
CAPN3-204ENST00000356316 MTFR1LQ9H019 292 aa14.75□□□□□ -0.05
CAPN3-204ENST00000356316 USHBP1Q8N6Y0 703 aa14.74□□□□□ -0.05
CAPN3-204ENST00000356316 CARD14Q9BXL6 1004 aa14.74□□□□□ -0.05
CAPN3-204ENST00000356316 INSRP06213 1382 aa14.73□□□□□ -0.05
CAPN3-204ENST00000356316 KIF24Q5T7B8 1368 aa14.73□□□□□ -0.05
CAPN3-204ENST00000356316 CCER1Q8TC90 406 aaPredicted RBP14.73□□□□□ -0.05
CAPN3-204ENST00000356316 FLT4P35916 1363 aa14.73□□□□□ -0.05
CAPN3-204ENST00000356316 YY1P25490 414 aa14.72□□□□□ -0.05
CAPN3-204ENST00000356316 PTGER2P43116 358 aa14.72□□□□□ -0.05
CAPN3-204ENST00000356316 LRRC4BQ9NT99 713 aa14.72□□□□□ -0.05
CAPN3-204ENST00000356316 TFCP2L1Q9NZI6 479 aa14.72□□□□□ -0.05
CAPN3-204ENST00000356316 NSD3Q9BZ95 1437 aa14.72□□□□□ -0.05
CAPN3-204ENST00000356316 HMGB2P26583 209 aaKnown RBP14.71□□□□□ -0.05
CAPN3-204ENST00000356316 MEGF6O75095 1541 aa14.71□□□□□ -0.06
CAPN3-204ENST00000356316 EIF4G2P78344 907 aaKnown RBP eCLIP14.7□□□□□ -0.06
CAPN3-204ENST00000356316 ZNF827Q17R98 1081 aa14.7□□□□□ -0.06
CAPN3-204ENST00000356316 SLC16A10Q8TF71 515 aa14.7□□□□□ -0.06
CAPN3-204ENST00000356316 ARXQ96QS3 562 aa14.7□□□□□ -0.06
CAPN3-204ENST00000356316 U3KPZ7 1027 aaPredicted RBP14.7□□□□□ -0.06
CAPN3-204ENST00000356316 DOT1LQ8TEK3 1739 aa14.69□□□□□ -0.06
CAPN3-204ENST00000356316 PCDH11XQ9BZA7 1347 aa14.69□□□□□ -0.06
CAPN3-204ENST00000356316 PCDH11YQ9BZA8 1340 aa14.69□□□□□ -0.06
CAPN3-204ENST00000356316 FHDC1Q9C0D6 1143 aaPredicted RBP14.69□□□□□ -0.06
CAPN3-204ENST00000356316 FOXD4L1Q9NU39 408 aa14.69□□□□□ -0.06
CAPN3-204ENST00000356316 CCNL1Q9UK58 526 aaPredicted RBP14.69□□□□□ -0.06
CAPN3-204ENST00000356316 EMILIN1Q9Y6C2 1016 aa14.69□□□□□ -0.06
CAPN3-204ENST00000356316 MYOM1P52179 1685 aa14.68□□□□□ -0.06
CAPN3-204ENST00000356316 POLD1P28340 1107 aa14.68□□□□□ -0.06
CAPN3-204ENST00000356316 KCNQ4P56696 695 aa14.68□□□□□ -0.06
CAPN3-204ENST00000356316 C1QBPQ07021 282 aaKnown RBP14.68□□□□□ -0.06
CAPN3-204ENST00000356316 AKT1S1Q96B36 256 aa14.68□□□□□ -0.06
CAPN3-204ENST00000356316 SYT17Q9BSW7 474 aa14.68□□□□□ -0.06
CAPN3-204ENST00000356316 SHANK3Q9BYB0 1731 aa14.67□□□□□ -0.06
CAPN3-204ENST00000356316 MAP2P11137 1827 aaKnown RBP14.67□□□□□ -0.06
CAPN3-204ENST00000356316 MPRIPQ6WCQ1 1025 aa14.67□□□□□ -0.06
CAPN3-204ENST00000356316 SPG7Q9UQ90 795 aa14.67□□□□□ -0.06
CAPN3-204ENST00000356316 WASHC2AQ641Q2 1341 aa14.66□□□□□ -0.06
CAPN3-204ENST00000356316 PAPPAQ13219 1627 aa14.66□□□□□ -0.06
CAPN3-204ENST00000356316 TNNT2P45379 298 aaPredicted RBP14.66□□□□□ -0.06
CAPN3-204ENST00000356316 HSPA5P11021 654 aaKnown RBP14.65□□□□□ -0.06
CAPN3-204ENST00000356316 SGIP1Q9BQI5 828 aa14.65□□□□□ -0.06
CAPN3-204ENST00000356316 LY75O60449 1722 aa14.65□□□□□ -0.06
CAPN3-204ENST00000356316 NSD2O96028 1365 aa14.64□□□□□ -0.07
CAPN3-204ENST00000356316 KLHL34Q8N239 644 aa14.64□□□□□ -0.07
CAPN3-204ENST00000356316 PANK3Q9H999 370 aa14.64□□□□□ -0.07
CAPN3-204ENST00000356316 POLKQ9UBT6 870 aa14.64□□□□□ -0.07
CAPN3-204ENST00000356316 PNPLA7Q6ZV29 1317 aa14.64□□□□□ -0.07
CAPN3-204ENST00000356316 QSER1Q2KHR3 1735 aa14.63□□□□□ -0.07
CAPN3-204ENST00000356316 CYP27B1O15528 508 aa14.63□□□□□ -0.07
CAPN3-204ENST00000356316 SMARCC1Q92922 1105 aaPredicted RBP14.63□□□□□ -0.07
CAPN3-204ENST00000356316 EYA1Q99502 592 aa14.62□□□□□ -0.07
CAPN3-204ENST00000356316 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.62□□□□□ -0.07
CAPN3-204ENST00000356316 FLAD1Q8NFF5 587 aa14.61□□□□□ -0.07
CAPN3-204ENST00000356316 GPR162Q16538 588 aa14.6□□□□□ -0.07
CAPN3-204ENST00000356316 IFNL2Q8IZJ0 200 aa14.6□□□□□ -0.07
CAPN3-204ENST00000356316 PALLDQ8WX93 1383 aa14.6□□□□□ -0.07
CAPN3-204ENST00000356316 ANKRD26Q9UPS8 1709 aa14.59□□□□□ -0.07
CAPN3-204ENST00000356316 NKX1-1Q15270 411 aaPredicted RBP14.59□□□□□ -0.07
CAPN3-204ENST00000356316 MORC1Q86VD1 984 aa14.59□□□□□ -0.07
CAPN3-204ENST00000356316 COL23A1Q86Y22 540 aaPredicted RBP14.59□□□□□ -0.07
CAPN3-204ENST00000356316 TMOD3Q9NYL9 352 aa14.59□□□□□ -0.07
CAPN3-204ENST00000356316 ITGB4P16144 1822 aa14.59□□□□□ -0.07
CAPN3-204ENST00000356316 MAP3K5Q99683 1374 aa14.59□□□□□ -0.07
CAPN3-204ENST00000356316 TUBGCP6Q96RT7 1819 aa14.58□□□□□ -0.08
CAPN3-204ENST00000356316 ZBTB22O15209 634 aa14.58□□□□□ -0.08
CAPN3-204ENST00000356316 EIF4A2Q14240 407 aaKnown RBP14.58□□□□□ -0.08
CAPN3-204ENST00000356316 PELP1Q8IZL8 1130 aaKnown RBP14.58□□□□□ -0.08
CAPN3-204ENST00000356316 PIGBQ92521 554 aa14.58□□□□□ -0.08
CAPN3-204ENST00000356316 AK7Q96M32 723 aa14.58□□□□□ -0.08
CAPN3-204ENST00000356316 KNSTRNQ9Y448 316 aa14.58□□□□□ -0.08
CAPN3-204ENST00000356316 PKD1L3Q7Z443 1732 aa14.58□□□□□ -0.08
CAPN3-204ENST00000356316 MYCNP04198 464 aaPredicted RBP14.57□□□□□ -0.08
CAPN3-204ENST00000356316 C5P01031 1676 aa14.57□□□□□ -0.08
CAPN3-204ENST00000356316 PHKG2P15735 406 aa14.56□□□□□ -0.08
CAPN3-204ENST00000356316 UTRNP46939 3433 aa14.56□□□□□ -0.08
CAPN3-204ENST00000356316 NCAPD2Q15021 1401 aa14.56□□□□□ -0.08
CAPN3-204ENST00000356316 CACNB1Q02641 598 aaPredicted RBP14.55□□□□□ -0.08
CAPN3-204ENST00000356316 PLEKHO1Q53GL0 409 aaPredicted RBP14.55□□□□□ -0.08
CAPN3-204ENST00000356316 TAF1LQ8IZX4 1826 aa14.55□□□□□ -0.08
CAPN3-204ENST00000356316 CHD4Q14839 1912 aa14.54□□□□□ -0.08
CAPN3-204ENST00000356316 LOC102724428A0A0B4J2F2 783 aa14.54□□□□□ -0.08
CAPN3-204ENST00000356316 HSP90AB1P08238 724 aaKnown RBP14.54□□□□□ -0.08
CAPN3-204ENST00000356316 SIK1P57059 783 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms