RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 BCAR3O75815 825 aa12.92□□□□□ -0.34
GTF3C1-201ENST00000356183 MAP3K11Q16584 847 aa12.92□□□□□ -0.34
GTF3C1-201ENST00000356183 GCC1Q96CN9 775 aa12.92□□□□□ -0.34
GTF3C1-201ENST00000356183 PUS7Q96PZ0 661 aaKnown RBP12.92□□□□□ -0.34
GTF3C1-201ENST00000356183 KIF5CO60282 957 aa12.92□□□□□ -0.34
GTF3C1-201ENST00000356183 NUTM2GQ5VZR2 741 aa12.92□□□□□ -0.34
GTF3C1-201ENST00000356183 TRIM22Q8IYM9 498 aa12.92□□□□□ -0.34
GTF3C1-201ENST00000356183 CLCN1P35523 988 aa12.91□□□□□ -0.34
GTF3C1-201ENST00000356183 MYOM3Q5VTT5 1437 aa12.91□□□□□ -0.34
GTF3C1-201ENST00000356183 CCDC30Q5VVM6 783 aa12.91□□□□□ -0.34
GTF3C1-201ENST00000356183 NOL7Q9UMY1 257 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-201ENST00000356183 GNAI2P04899 355 aa12.91□□□□□ -0.34
GTF3C1-201ENST00000356183 JAKMIP1Q96N16 626 aaKnown RBP12.91□□□□□ -0.34
GTF3C1-201ENST00000356183 LMAN1P49257 510 aa12.91□□□□□ -0.34
GTF3C1-201ENST00000356183 SPA17Q15506 151 aa12.91□□□□□ -0.34
GTF3C1-201ENST00000356183 KIF18AQ8NI77 898 aa12.91□□□□□ -0.34
GTF3C1-201ENST00000356183 CCDC158Q5M9N0 1113 aa12.91□□□□□ -0.34
GTF3C1-201ENST00000356183 KIF4BQ2VIQ3 1234 aa12.9□□□□□ -0.34
GTF3C1-201ENST00000356183 CTR9Q6PD62 1173 aa12.9□□□□□ -0.34
GTF3C1-201ENST00000356183 CNNM1Q9NRU3 951 aa12.9□□□□□ -0.34
GTF3C1-201ENST00000356183 EXOSC9Q06265 439 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-201ENST00000356183 CLIP2Q9UDT6 1046 aa12.9□□□□□ -0.34
GTF3C1-201ENST00000356183 GCOM1H8Y6P7 765 aaPredicted RBP12.9□□□□□ -0.34
GTF3C1-201ENST00000356183 ATP2C2O75185 946 aa12.9□□□□□ -0.34
GTF3C1-201ENST00000356183 MYZAPP0CAP1 466 aa12.9□□□□□ -0.34
GTF3C1-201ENST00000356183 CWC27Q6UX04 472 aaKnown RBP12.9□□□□□ -0.34
GTF3C1-201ENST00000356183 C16orf45Q96MC5 204 aaPredicted RBP12.9□□□□□ -0.35
GTF3C1-201ENST00000356183 CUX1P39880 1505 aa12.9□□□□□ -0.35
GTF3C1-201ENST00000356183 ANAPC15P60006 121 aa12.89□□□□□ -0.35
GTF3C1-201ENST00000356183 LUZP1Q86V48 1076 aa12.89□□□□□ -0.35
GTF3C1-201ENST00000356183 GGNBP2Q9H3C7 697 aa12.89□□□□□ -0.35
GTF3C1-201ENST00000356183 ZSCAN12O43309 604 aa12.89□□□□□ -0.35
GTF3C1-201ENST00000356183 KIF6Q6ZMV9 814 aa12.89□□□□□ -0.35
GTF3C1-201ENST00000356183 ERC1Q8IUD2 1116 aa12.89□□□□□ -0.35
GTF3C1-201ENST00000356183 GNAI3P08754 354 aa12.89□□□□□ -0.35
GTF3C1-201ENST00000356183 MCM3P25205 808 aa12.89□□□□□ -0.35
GTF3C1-201ENST00000356183 TMCO5BA8MYB1 307 aa12.89□□□□□ -0.35
GTF3C1-201ENST00000356183 CCDC57Q2TAC2 916 aa12.89□□□□□ -0.35
GTF3C1-201ENST00000356183 SOGA3Q5TF21 947 aa12.89□□□□□ -0.35
GTF3C1-201ENST00000356183 CTNNBL1Q8WYA6 563 aaPredicted RBP12.89□□□□□ -0.35
GTF3C1-201ENST00000356183 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.89□□□□□ -0.353e-6■■■■□ 21.7
GTF3C1-201ENST00000356183 KLHL10Q6JEL2 608 aa12.88□□□□□ -0.35
GTF3C1-201ENST00000356183 PPM1EQ8WY54 764 aa12.88□□□□□ -0.35
GTF3C1-201ENST00000356183 TSR2Q969E8 191 aaKnown RBP12.88□□□□□ -0.35
GTF3C1-201ENST00000356183 CHD1LQ86WJ1 897 aa12.88□□□□□ -0.35
GTF3C1-201ENST00000356183 FAM107BQ9H098 131 aa12.88□□□□□ -0.35
GTF3C1-201ENST00000356183 MNAT1P51948 309 aa12.87□□□□□ -0.35
GTF3C1-201ENST00000356183 SPINK5Q9NQ38 1064 aaPredicted RBP12.87□□□□□ -0.35
GTF3C1-201ENST00000356183 GSTTP1A0A1W2PQM5 241 aa12.87□□□□□ -0.35
GTF3C1-201ENST00000356183 CASTP20810 708 aaKnown RBP12.87□□□□□ -0.35
GTF3C1-201ENST00000356183 SMC1AQ14683 1233 aaKnown RBP12.87□□□□□ -0.35
GTF3C1-201ENST00000356183 SFPQP23246 707 aaKnown RBP eCLIP12.87□□□□□ -0.35
GTF3C1-201ENST00000356183 SPATA24Q86W54 205 aa12.87□□□□□ -0.35
GTF3C1-201ENST00000356183 CABP2Q9NPB3 220 aa12.87□□□□□ -0.35
GTF3C1-201ENST00000356183 CCDC175P0C221 793 aa12.87□□□□□ -0.35
GTF3C1-201ENST00000356183 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.87□□□□□ -0.35
GTF3C1-201ENST00000356183 DESP17661 470 aa12.87□□□□□ -0.35
GTF3C1-201ENST00000356183 CPLX3Q8WVH0 158 aa12.87□□□□□ -0.35
GTF3C1-201ENST00000356183 DNAAF4Q8WXU2 420 aa12.87□□□□□ -0.35
GTF3C1-201ENST00000356183 IMMTQ16891 758 aaKnown RBP12.86□□□□□ -0.35
GTF3C1-201ENST00000356183 SMARCC1Q92922 1105 aaPredicted RBP12.86□□□□□ -0.35
GTF3C1-201ENST00000356183 CASKIN1Q8WXD9 1431 aa12.86□□□□□ -0.35
GTF3C1-201ENST00000356183 VGFO15240 615 aaPredicted RBP12.86□□□□□ -0.35
GTF3C1-201ENST00000356183 TOP1P11387 765 aaKnown RBP12.86□□□□□ -0.35
GTF3C1-201ENST00000356183 CCDC183Q5T5S1 534 aa12.86□□□□□ -0.35
GTF3C1-201ENST00000356183 BLOC1S2Q6QNY1 142 aa12.86□□□□□ -0.35
GTF3C1-201ENST00000356183 TIGD1Q96MW7 591 aa12.86□□□□□ -0.35
GTF3C1-201ENST00000356183 FKBP4Q02790 459 aaKnown RBP eCLIP12.86□□□□□ -0.35
GTF3C1-201ENST00000356183 TWISTNBQ3B726 338 aaPredicted RBP12.86□□□□□ -0.35
GTF3C1-201ENST00000356183 DYNC1I1O14576 645 aa12.86□□□□□ -0.35
GTF3C1-201ENST00000356183 MAATS1Q7Z4T9 603 aa12.86□□□□□ -0.35
GTF3C1-201ENST00000356183 RAPGEF4Q8WZA2 1011 aa12.86□□□□□ -0.35
GTF3C1-201ENST00000356183 KIF2AO00139 706 aaPredicted RBP12.85□□□□□ -0.35
GTF3C1-201ENST00000356183 NUP88Q99567 741 aaPredicted RBP12.85□□□□□ -0.35
GTF3C1-201ENST00000356183 ARAP1Q96P48 1450 aa12.85□□□□□ -0.35
GTF3C1-201ENST00000356183 GIGYF2Q6Y7W6 1299 aaKnown RBP12.85□□□□□ -0.35
GTF3C1-201ENST00000356183 PRDM2Q13029 1718 aa12.85□□□□□ -0.35
GTF3C1-201ENST00000356183 CCDC83Q8IWF9 413 aa12.85□□□□□ -0.35
GTF3C1-201ENST00000356183 BMP2KQ9NSY1 1161 aaPredicted RBP12.85□□□□□ -0.35
GTF3C1-201ENST00000356183 LIG1P18858 919 aa12.85□□□□□ -0.35
GTF3C1-201ENST00000356183 PPP2R1AP30153 589 aa12.85□□□□□ -0.35
GTF3C1-201ENST00000356183 DCAF8L1A6NGE4 600 aa12.84□□□□□ -0.35
GTF3C1-201ENST00000356183 ZNF76P36508 570 aa12.84□□□□□ -0.35
GTF3C1-201ENST00000356183 CACNA2D4Q7Z3S7 1137 aa12.84□□□□□ -0.35
GTF3C1-201ENST00000356183 CDKL5O76039 1030 aa12.84□□□□□ -0.35
GTF3C1-201ENST00000356183 MCM5P33992 734 aa12.84□□□□□ -0.35
GTF3C1-201ENST00000356183 AACSQ86V21 672 aa12.84□□□□□ -0.35
GTF3C1-201ENST00000356183 CCDC160A6NGH7 325 aa12.84□□□□□ -0.35
GTF3C1-201ENST00000356183 HLTFQ14527 1009 aaKnown RBP eCLIP12.84□□□□□ -0.35
GTF3C1-201ENST00000356183 TCP11L2Q8N4U5 519 aa12.84□□□□□ -0.35
GTF3C1-201ENST00000356183 BBXQ8WY36 941 aaPredicted RBP12.84□□□□□ -0.35
GTF3C1-201ENST00000356183 USP5P45974 858 aa12.84□□□□□ -0.35
GTF3C1-201ENST00000356183 DDX23Q9BUQ8 820 aaKnown RBP12.84□□□□□ -0.35
GTF3C1-201ENST00000356183 USP25Q9UHP3 1055 aa12.84□□□□□ -0.35
GTF3C1-201ENST00000356183 SLC4A2P04920 1241 aa12.83□□□□□ -0.36
GTF3C1-201ENST00000356183 MTHFSP49914 203 aa12.83□□□□□ -0.36
GTF3C1-201ENST00000356183 SPECC1Q5M775 1068 aa12.83□□□□□ -0.36
GTF3C1-201ENST00000356183 ZBTB9Q96C00 473 aa12.83□□□□□ -0.36
GTF3C1-201ENST00000356183 ZSCAN31Q96LW9 406 aaPredicted RBP12.83□□□□□ -0.36
GTF3C1-201ENST00000356183 LARP1Q6PKG0 1096 aaKnown RBP12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms