RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 ZMYND15Q9H091 742 aa20.23■□□□□ 0.83
COL27A1-201ENST00000356083 PLEKHO1Q53GL0 409 aaPredicted RBP20.23■□□□□ 0.83
COL27A1-201ENST00000356083 C16orf71Q8IYS4 520 aaPredicted RBP20.23■□□□□ 0.83
COL27A1-201ENST00000356083 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.23■□□□□ 0.832e-7■■□□□ 13.8
COL27A1-201ENST00000356083 MKNK2Q9HBH9 465 aa20.23■□□□□ 0.83
COL27A1-201ENST00000356083 LARP1Q6PKG0 1096 aaKnown RBP20.22■□□□□ 0.83
COL27A1-201ENST00000356083 EIF3JO75822 258 aaKnown RBP20.22■□□□□ 0.83
COL27A1-201ENST00000356083 RBM25P49756 843 aaKnown RBP20.22■□□□□ 0.83
COL27A1-201ENST00000356083 TNIKQ9UKE5 1360 aa20.22■□□□□ 0.83
COL27A1-201ENST00000356083 FHOD3Q2V2M9 1422 aa20.21■□□□□ 0.83
COL27A1-201ENST00000356083 CDC45O75419 566 aa20.21■□□□□ 0.83
COL27A1-201ENST00000356083 ZWINTO95229 277 aa20.21■□□□□ 0.83
COL27A1-201ENST00000356083 CCDC96Q2M329 555 aa20.21■□□□□ 0.83
COL27A1-201ENST00000356083 CCDC82Q8N4S0 544 aa20.2■□□□□ 0.83
COL27A1-201ENST00000356083 SPTY2D1Q68D10 685 aaPredicted RBP20.2■□□□□ 0.82
COL27A1-201ENST00000356083 LMAN1P49257 510 aa20.2■□□□□ 0.82
COL27A1-201ENST00000356083 TMX1Q9H3N1 280 aa20.2■□□□□ 0.82
COL27A1-201ENST00000356083 ZPR1O75312 459 aa20.2■□□□□ 0.82
COL27A1-201ENST00000356083 USP8P40818 1118 aa20.19■□□□□ 0.82
COL27A1-201ENST00000356083 LRSAM1Q6UWE0 723 aa20.19■□□□□ 0.82
COL27A1-201ENST00000356083 GNAI2P04899 355 aa20.19■□□□□ 0.82
COL27A1-201ENST00000356083 CYP46A1Q9Y6A2 500 aa20.19■□□□□ 0.82
COL27A1-201ENST00000356083 KIF7Q2M1P5 1343 aa20.18■□□□□ 0.82
COL27A1-201ENST00000356083 CACNA2D4Q7Z3S7 1137 aa20.18■□□□□ 0.82
COL27A1-201ENST00000356083 APBB1IPQ7Z5R6 666 aaPredicted RBP20.18■□□□□ 0.82
COL27A1-201ENST00000356083 IFFO1Q0D2I5 559 aa20.18■□□□□ 0.82
COL27A1-201ENST00000356083 HDGFL1Q5TGJ6 251 aa20.17■□□□□ 0.82
COL27A1-201ENST00000356083 IQCEQ6IPM2 695 aa20.17■□□□□ 0.82
COL27A1-201ENST00000356083 SAMM50Q9Y512 469 aa20.17■□□□□ 0.82
COL27A1-201ENST00000356083 LARP1BQ659C4 914 aaKnown RBP20.17■□□□□ 0.82
COL27A1-201ENST00000356083 TRAK2O60296 914 aa20.17■□□□□ 0.82
COL27A1-201ENST00000356083 CWC27Q6UX04 472 aaKnown RBP20.16■□□□□ 0.82
COL27A1-201ENST00000356083 FILIP1Q7Z7B0 1213 aa20.16■□□□□ 0.82
COL27A1-201ENST00000356083 DDX11Q96FC9 970 aa20.16■□□□□ 0.82
COL27A1-201ENST00000356083 CCDC192P0DO97 292 aa20.16■□□□□ 0.82
COL27A1-201ENST00000356083 IGHMBP2P38935 993 aaKnown RBP20.16■□□□□ 0.82
COL27A1-201ENST00000356083 RAD54L2Q9Y4B4 1467 aa20.16■□□□□ 0.82
COL27A1-201ENST00000356083 MMRN2Q9H8L6 949 aa20.15■□□□□ 0.82
COL27A1-201ENST00000356083 C11orf95C9JLR9 678 aaPredicted RBP20.15■□□□□ 0.82
COL27A1-201ENST00000356083 FEZ1Q99689 392 aa20.15■□□□□ 0.82
COL27A1-201ENST00000356083 PRPF4BQ13523 1007 aaKnown RBP20.14■□□□□ 0.82
COL27A1-201ENST00000356083 AACSQ86V21 672 aa20.14■□□□□ 0.82
COL27A1-201ENST00000356083 GNAI3P08754 354 aa20.14■□□□□ 0.81
COL27A1-201ENST00000356083 FMN1Q68DA7 1419 aa20.14■□□□□ 0.81
COL27A1-201ENST00000356083 SLC4A2P04920 1241 aa20.14■□□□□ 0.81
COL27A1-201ENST00000356083 OTUD6BQ8N6M0 293 aa20.14■□□□□ 0.81
COL27A1-201ENST00000356083 ZSCAN25Q6NSZ9 544 aa20.13■□□□□ 0.81
COL27A1-201ENST00000356083 ADAMTS2O95450 1211 aa20.13■□□□□ 0.81
COL27A1-201ENST00000356083 FERP16591 822 aa20.13■□□□□ 0.81
COL27A1-201ENST00000356083 PTCD1O75127 700 aaKnown RBP20.13■□□□□ 0.81
COL27A1-201ENST00000356083 CFAP100Q494V2 611 aa20.13■□□□□ 0.81
COL27A1-201ENST00000356083 CCDC18Q5T9S5 1454 aa20.13■□□□□ 0.81
COL27A1-201ENST00000356083 ERLIN1O75477 346 aa20.13■□□□□ 0.81
COL27A1-201ENST00000356083 TMCO3Q6UWJ1 677 aa20.13■□□□□ 0.81
COL27A1-201ENST00000356083 SMARCA2P51531 1590 aa20.13■□□□□ 0.81
COL27A1-201ENST00000356083 DZIP1Q86YF9 867 aaKnown RBP20.13■□□□□ 0.81
COL27A1-201ENST00000356083 MIA2Q96PC5 1412 aa20.12■□□□□ 0.81
COL27A1-201ENST00000356083 CCDC148Q8NFR7 591 aa20.12■□□□□ 0.81
COL27A1-201ENST00000356083 SH3BP5O60239 455 aa20.12■□□□□ 0.81
COL27A1-201ENST00000356083 CLEC11AQ9Y240 323 aa20.12■□□□□ 0.81
COL27A1-201ENST00000356083 SPA17Q15506 151 aa20.11■□□□□ 0.81
COL27A1-201ENST00000356083 GAS2L2Q8NHY3 880 aa20.11■□□□□ 0.81
COL27A1-201ENST00000356083 ARHGAP29Q52LW3 1261 aa20.11■□□□□ 0.81
COL27A1-201ENST00000356083 SPECC1Q5M775 1068 aa20.11■□□□□ 0.81
COL27A1-201ENST00000356083 VAT1LQ9HCJ6 419 aa20.11■□□□□ 0.81
COL27A1-201ENST00000356083 BTBD11A6QL63 1104 aa20.11■□□□□ 0.81
COL27A1-201ENST00000356083 ANKRD1Q15327 319 aa20.11■□□□□ 0.81
COL27A1-201ENST00000356083 CRACR2AQ9BSW2 395 aa20.11■□□□□ 0.81
COL27A1-201ENST00000356083 LUZP1Q86V48 1076 aa20.1■□□□□ 0.81
COL27A1-201ENST00000356083 CUL5Q93034 780 aa20.1■□□□□ 0.81
COL27A1-201ENST00000356083 AIDAQ96BJ3 306 aa20.1■□□□□ 0.81
COL27A1-201ENST00000356083 TERF1P54274 439 aa20.1■□□□□ 0.81
COL27A1-201ENST00000356083 CAMK4Q16566 473 aa20.1■□□□□ 0.81
COL27A1-201ENST00000356083 METTL24Q5JXM2 366 aa20.1■□□□□ 0.81
COL27A1-201ENST00000356083 USP47Q96K76 1375 aa20.1■□□□□ 0.81
COL27A1-201ENST00000356083 CBFA2T2O43439 604 aa20.1■□□□□ 0.81
COL27A1-201ENST00000356083 TXNDC2Q86VQ3 553 aa20.1■□□□□ 0.81
COL27A1-201ENST00000356083 PRDM11Q9NQV5 511 aa20.1■□□□□ 0.81
COL27A1-201ENST00000356083 SYCP3Q8IZU3 236 aa20.1■□□□□ 0.81
COL27A1-201ENST00000356083 CDKL5O76039 1030 aa20.09■□□□□ 0.81
COL27A1-201ENST00000356083 BMS1Q14692 1282 aaKnown RBP20.09■□□□□ 0.81
COL27A1-201ENST00000356083 CKAP2LQ8IYA6 745 aa20.09■□□□□ 0.81
COL27A1-201ENST00000356083 TIGD1Q96MW7 591 aa20.09■□□□□ 0.81
COL27A1-201ENST00000356083 KIF20AO95235 890 aa20.09■□□□□ 0.81
COL27A1-201ENST00000356083 KRT85P78386 507 aa20.09■□□□□ 0.81
COL27A1-201ENST00000356083 RAB3IL1Q8TBN0 382 aa20.09■□□□□ 0.81
COL27A1-201ENST00000356083 BCAR3O75815 825 aa20.09■□□□□ 0.81
COL27A1-201ENST00000356083 DPH6Q7L8W6 267 aa20.09■□□□□ 0.81
COL27A1-201ENST00000356083 JPH4Q96JJ6 628 aa20.09■□□□□ 0.81
COL27A1-201ENST00000356083 SPATA32Q96LK8 384 aa20.09■□□□□ 0.81
COL27A1-201ENST00000356083 GUCY1B3Q02153 619 aa20.09■□□□□ 0.81
COL27A1-201ENST00000356083 ZNF444Q8N0Y2 327 aaPredicted RBP20.08■□□□□ 0.81
COL27A1-201ENST00000356083 TSG101Q99816 390 aa20.08■□□□□ 0.81
COL27A1-201ENST00000356083 RANBP6O60518 1105 aaKnown RBP20.08■□□□□ 0.81
COL27A1-201ENST00000356083 GIGYF2Q6Y7W6 1299 aaKnown RBP20.08■□□□□ 0.81
COL27A1-201ENST00000356083 RPGRQ92834 1020 aaKnown RBP20.08■□□□□ 0.81
COL27A1-201ENST00000356083 NOB1Q9ULX3 412 aaKnown RBP20.08■□□□□ 0.81
COL27A1-201ENST00000356083 DHX57Q6P158 1386 aaKnown RBP20.08■□□□□ 0.81
COL27A1-201ENST00000356083 RNF187Q5TA31 235 aaPredicted RBP20.08■□□□□ 0.81
COL27A1-201ENST00000356083 PPP1R14CQ8TAE6 165 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms