RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 VSIG10Q8N0Z9 540 aa14.91□□□□□ -0.02
SIRPA-201ENST00000356025 CHMP3Q9Y3E7 222 aa14.91□□□□□ -0.02
SIRPA-201ENST00000356025 REC8O95072 547 aa14.9□□□□□ -0.02
SIRPA-201ENST00000356025 PTMAP06454 111 aaKnown RBP14.9□□□□□ -0.02
SIRPA-201ENST00000356025 ZC3H6P61129 1189 aaKnown RBP14.9□□□□□ -0.02
SIRPA-201ENST00000356025 CCDC30Q5VVM6 783 aa14.9□□□□□ -0.02
SIRPA-201ENST00000356025 KIAA1211Q6ZU35 1233 aa14.9□□□□□ -0.02
SIRPA-201ENST00000356025 HECW2Q9P2P5 1572 aa14.9□□□□□ -0.02
SIRPA-201ENST00000356025 XRCC6P12956 609 aaKnown RBP eCLIP14.89□□□□□ -0.03
SIRPA-201ENST00000356025 FLIIQ13045 1269 aa14.89□□□□□ -0.03
SIRPA-201ENST00000356025 LRRC59Q96AG4 307 aaKnown RBP14.89□□□□□ -0.03
SIRPA-201ENST00000356025 TNRQ92752 1358 aa14.89□□□□□ -0.03
SIRPA-201ENST00000356025 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.89□□□□□ -0.03
SIRPA-201ENST00000356025 GSPT1P15170 499 aaKnown RBP14.89□□□□□ -0.03
SIRPA-201ENST00000356025 CEP85Q6P2H3 762 aa14.89□□□□□ -0.03
SIRPA-201ENST00000356025 JARID2Q92833 1246 aaPredicted RBP14.89□□□□□ -0.03
SIRPA-201ENST00000356025 SIL1Q9H173 461 aa14.89□□□□□ -0.03
SIRPA-201ENST00000356025 GNAT3A8MTJ3 354 aa14.88□□□□□ -0.03
SIRPA-201ENST00000356025 GLIPR1L2Q4G1C9 344 aa14.88□□□□□ -0.03
SIRPA-201ENST00000356025 RPAP2Q8IXW5 612 aaPredicted RBP14.88□□□□□ -0.03
SIRPA-201ENST00000356025 PHAXQ9H814 394 aaKnown RBP14.88□□□□□ -0.03
SIRPA-201ENST00000356025 KCNA6P17658 529 aa14.88□□□□□ -0.03
SIRPA-201ENST00000356025 SRGAP3O43295 1099 aa14.88□□□□□ -0.03
SIRPA-201ENST00000356025 TTC22Q5TAA0 569 aa14.88□□□□□ -0.03
SIRPA-201ENST00000356025 ZGPATQ8N5A5 531 aaKnown RBP14.88□□□□□ -0.03
SIRPA-201ENST00000356025 LRRCC1Q9C099 1032 aa14.88□□□□□ -0.03
SIRPA-201ENST00000356025 MSH6P52701 1360 aa14.87□□□□□ -0.03
SIRPA-201ENST00000356025 ZNF530Q6P9A1 599 aaPredicted RBP14.87□□□□□ -0.03
SIRPA-201ENST00000356025 PIP4K2AP48426 406 aaPredicted RBP14.87□□□□□ -0.03
SIRPA-201ENST00000356025 C1orf141Q5JVX7 400 aa14.87□□□□□ -0.03
SIRPA-201ENST00000356025 ARAP3Q8WWN8 1544 aa14.87□□□□□ -0.03
SIRPA-201ENST00000356025 ANKRD44Q8N8A2 993 aa14.86□□□□□ -0.03
SIRPA-201ENST00000356025 ARHGAP45Q92619 1136 aa14.86□□□□□ -0.03
SIRPA-201ENST00000356025 ANTXR1Q9H6X2 564 aa14.86□□□□□ -0.03
SIRPA-201ENST00000356025 GDPD2Q9HCC8 539 aa14.86□□□□□ -0.03
SIRPA-201ENST00000356025 NLRP2Q9NX02 1062 aa14.86□□□□□ -0.03
SIRPA-201ENST00000356025 TAF7Q15545 349 aaPredicted RBP14.86□□□□□ -0.03
SIRPA-201ENST00000356025 THEMISQ8N1K5 641 aaPredicted RBP14.86□□□□□ -0.03
SIRPA-201ENST00000356025 DCTPP1Q9H773 170 aa14.86□□□□□ -0.03
SIRPA-201ENST00000356025 ADGRB1O14514 1584 aa14.86□□□□□ -0.03
SIRPA-201ENST00000356025 MYL6BP14649 208 aa14.86□□□□□ -0.03
SIRPA-201ENST00000356025 GRPEL1Q9HAV7 217 aa14.86□□□□□ -0.03
SIRPA-201ENST00000356025 ROBO2Q9HCK4 1378 aa14.86□□□□□ -0.03
SIRPA-201ENST00000356025 ERC2O15083 957 aa14.85□□□□□ -0.03
SIRPA-201ENST00000356025 MROH1Q8NDA8 1641 aa14.85□□□□□ -0.03
SIRPA-201ENST00000356025 MYOM1P52179 1685 aa14.85□□□□□ -0.03
SIRPA-201ENST00000356025 RABEP1Q15276 862 aa14.85□□□□□ -0.03
SIRPA-201ENST00000356025 CCT4P50991 539 aaKnown RBP14.85□□□□□ -0.03
SIRPA-201ENST00000356025 NEO1Q92859 1461 aa14.84□□□□□ -0.03
SIRPA-201ENST00000356025 GNAI3P08754 354 aa14.84□□□□□ -0.03
SIRPA-201ENST00000356025 PKP1Q13835 747 aa14.84□□□□□ -0.03
SIRPA-201ENST00000356025 HSP90AA2PQ14568 343 aaPredicted RBP14.84□□□□□ -0.03
SIRPA-201ENST00000356025 PNMA6EA0A0J9YXQ4 647 aa14.84□□□□□ -0.03
SIRPA-201ENST00000356025 CHL1O00533 1208 aa14.84□□□□□ -0.03
SIRPA-201ENST00000356025 CWC27Q6UX04 472 aaKnown RBP14.84□□□□□ -0.03
SIRPA-201ENST00000356025 RBM27Q9P2N5 1060 aaKnown RBP14.84□□□□□ -0.03
SIRPA-201ENST00000356025 FGD1P98174 961 aa14.83□□□□□ -0.04
SIRPA-201ENST00000356025 PI4KAP2A4QPH2 592 aa14.83□□□□□ -0.04
SIRPA-201ENST00000356025 MX1P20591 662 aa14.83□□□□□ -0.04
SIRPA-201ENST00000356025 PI4KAP1Q8N8J0 262 aa14.83□□□□□ -0.04
SIRPA-201ENST00000356025 SRCIN1Q9C0H9 1055 aa14.83□□□□□ -0.04
SIRPA-201ENST00000356025 EDC4Q6P2E9 1401 aaKnown RBP14.83□□□□□ -0.04
SIRPA-201ENST00000356025 LGR6Q9HBX8 967 aa14.82□□□□□ -0.04
SIRPA-201ENST00000356025 ZFYVE9O95405 1425 aa14.82□□□□□ -0.04
SIRPA-201ENST00000356025 MRE11P49959 708 aa14.82□□□□□ -0.04
SIRPA-201ENST00000356025 PDE1AP54750 535 aa14.82□□□□□ -0.04
SIRPA-201ENST00000356025 BTBD11A6QL63 1104 aa14.82□□□□□ -0.04
SIRPA-201ENST00000356025 KCNQ3O43525 872 aa14.82□□□□□ -0.04
SIRPA-201ENST00000356025 DIAPH3Q9NSV4 1193 aa14.82□□□□□ -0.04
SIRPA-201ENST00000356025 SPG7Q9UQ90 795 aa14.82□□□□□ -0.04
SIRPA-201ENST00000356025 CAMSAP1Q5T5Y3 1602 aa14.82□□□□□ -0.04
SIRPA-201ENST00000356025 FRMPD1Q5SYB0 1578 aa14.81□□□□□ -0.04
SIRPA-201ENST00000356025 FOSBP53539 338 aa14.81□□□□□ -0.04
SIRPA-201ENST00000356025 PPP1R42Q7Z4L9 355 aa14.81□□□□□ -0.04
SIRPA-201ENST00000356025 CHPF2Q9P2E5 772 aa14.81□□□□□ -0.04
SIRPA-201ENST00000356025 VWDEQ8N2E2 1590 aa14.81□□□□□ -0.04
SIRPA-201ENST00000356025 DNTTIP2Q5QJE6 756 aaKnown RBP14.81□□□□□ -0.04
SIRPA-201ENST00000356025 PHF8Q9UPP1 1060 aa14.81□□□□□ -0.04
SIRPA-201ENST00000356025 ABCC4O15439 1325 aa14.81□□□□□ -0.04
SIRPA-201ENST00000356025 ZNF853P0CG23 659 aa14.8□□□□□ -0.04
SIRPA-201ENST00000356025 NEXMIFQ5QGS0 1516 aa14.8□□□□□ -0.04
SIRPA-201ENST00000356025 NRXN1Q9ULB1 1477 aa14.8□□□□□ -0.04
SIRPA-201ENST00000356025 IFIT2P09913 472 aaKnown RBP14.8□□□□□ -0.04
SIRPA-201ENST00000356025 MSNP26038 577 aaKnown RBP14.8□□□□□ -0.04
SIRPA-201ENST00000356025 NASPP49321 788 aaPredicted RBP14.8□□□□□ -0.04
SIRPA-201ENST00000356025 PTPRMP28827 1452 aa14.8□□□□□ -0.04
SIRPA-201ENST00000356025 IQSEC2Q5JU85 1478 aa14.8□□□□□ -0.04
SIRPA-201ENST00000356025 BAG4O95429 457 aaKnown RBP14.79□□□□□ -0.04
SIRPA-201ENST00000356025 RBM25P49756 843 aaKnown RBP14.79□□□□□ -0.04
SIRPA-201ENST00000356025 SLC39A6Q13433 755 aa14.79□□□□□ -0.04
SIRPA-201ENST00000356025 UBE2Q2Q8WVN8 375 aa14.79□□□□□ -0.04
SIRPA-201ENST00000356025 PA2G4Q9UQ80 394 aaKnown RBP14.79□□□□□ -0.04
SIRPA-201ENST00000356025 NUCB2P80303 420 aa14.79□□□□□ -0.04
SIRPA-201ENST00000356025 RIC3Q7Z5B4 369 aa14.79□□□□□ -0.04
SIRPA-201ENST00000356025 CPA1P15085 419 aa14.78□□□□□ -0.04
SIRPA-201ENST00000356025 USP26Q9BXU7 913 aa14.78□□□□□ -0.04
SIRPA-201ENST00000356025 DEPDC5O75140 1603 aa14.78□□□□□ -0.04
SIRPA-201ENST00000356025 FAM135BQ49AJ0 1406 aa14.78□□□□□ -0.04
SIRPA-201ENST00000356025 ALKQ9UM73 1620 aa14.78□□□□□ -0.04
SIRPA-201ENST00000356025 VPS37CA5D8V6 355 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms