RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 UBAC1Q9BSL1 405 aa13.39□□□□□ -0.27
FN1-204ENST00000356005 CRACR2BQ8N4Y2 399 aaPredicted RBP13.39□□□□□ -0.27
FN1-204ENST00000356005 WASLO00401 505 aaPredicted RBP13.39□□□□□ -0.27
FN1-204ENST00000356005 FOXD4L6Q3SYB3 417 aaPredicted RBP13.39□□□□□ -0.27
FN1-204ENST00000356005 FOXD4L3Q6VB84 417 aaPredicted RBP13.39□□□□□ -0.27
FN1-204ENST00000356005 BCL11BQ9C0K0 894 aaPredicted RBP13.39□□□□□ -0.27
FN1-204ENST00000356005 TAF7Q15545 349 aaPredicted RBP13.39□□□□□ -0.27
FN1-204ENST00000356005 METTL24Q5JXM2 366 aa13.39□□□□□ -0.27
FN1-204ENST00000356005 NFE2L2Q16236 605 aa13.39□□□□□ -0.27
FN1-204ENST00000356005 RAI14Q9P0K7 980 aa13.39□□□□□ -0.27
FN1-204ENST00000356005 NBPF8Q3BBV2 869 aa13.38□□□□□ -0.27
FN1-204ENST00000356005 NBPF14Q5TI25 921 aa13.38□□□□□ -0.27
FN1-204ENST00000356005 LUC7LQ9NQ29 371 aaKnown RBP13.38□□□□□ -0.27
FN1-204ENST00000356005 ADAMTS8Q9UP79 889 aa13.38□□□□□ -0.27
FN1-204ENST00000356005 RBM19Q9Y4C8 960 aaKnown RBP13.38□□□□□ -0.27
FN1-204ENST00000356005 NOL7Q9UMY1 257 aaKnown RBP13.38□□□□□ -0.27
FN1-204ENST00000356005 ZNF76P36508 570 aa13.38□□□□□ -0.27
FN1-204ENST00000356005 FILIP1LQ4L180 1135 aa13.38□□□□□ -0.27
FN1-204ENST00000356005 BMP2KQ9NSY1 1161 aaPredicted RBP13.38□□□□□ -0.27
FN1-204ENST00000356005 CDR1P51861 262 aa13.38□□□□□ -0.27
FN1-204ENST00000356005 CDC5LQ99459 802 aaKnown RBP13.38□□□□□ -0.27
FN1-204ENST00000356005 PDE3AQ14432 1141 aa13.38□□□□□ -0.27
FN1-204ENST00000356005 DZIP1Q86YF9 867 aaKnown RBP13.38□□□□□ -0.27
FN1-204ENST00000356005 LETM1O95202 739 aaPredicted RBP13.37□□□□□ -0.27
FN1-204ENST00000356005 KRT32Q14532 448 aa13.37□□□□□ -0.27
FN1-204ENST00000356005 PPP1R42Q7Z4L9 355 aa13.37□□□□□ -0.27
FN1-204ENST00000356005 TXLNBQ8N3L3 684 aa13.37□□□□□ -0.27
FN1-204ENST00000356005 WASF1Q92558 559 aa13.37□□□□□ -0.27
FN1-204ENST00000356005 EHMT1Q9H9B1 1298 aa13.37□□□□□ -0.27
FN1-204ENST00000356005 SEC63Q9UGP8 760 aaKnown RBP13.37□□□□□ -0.27
FN1-204ENST00000356005 HSP90AB2PQ58FF8 381 aa13.37□□□□□ -0.27
FN1-204ENST00000356005 SDF4Q9BRK5 362 aa13.37□□□□□ -0.27
FN1-204ENST00000356005 A2MP01023 1474 aa13.37□□□□□ -0.27
FN1-204ENST00000356005 PTCD1O75127 700 aaKnown RBP13.37□□□□□ -0.27
FN1-204ENST00000356005 IFIT5Q13325 482 aaKnown RBP13.37□□□□□ -0.27
FN1-204ENST00000356005 NSD2O96028 1365 aa13.37□□□□□ -0.27
FN1-204ENST00000356005 DHX29Q7Z478 1369 aaKnown RBP13.37□□□□□ -0.27
FN1-204ENST00000356005 USP5P45974 858 aa13.37□□□□□ -0.27
FN1-204ENST00000356005 PPP4R3AQ6IN85 833 aa13.37□□□□□ -0.27
FN1-204ENST00000356005 SMARCC1Q92922 1105 aaPredicted RBP13.37□□□□□ -0.27
FN1-204ENST00000356005 CCAR2Q8N163 923 aaKnown RBP13.37□□□□□ -0.27
FN1-204ENST00000356005 KINO60870 393 aaKnown RBP13.36□□□□□ -0.27
FN1-204ENST00000356005 SLC5A1P13866 664 aa13.36□□□□□ -0.27
FN1-204ENST00000356005 NBPF1Q3BBV0 1214 aa13.36□□□□□ -0.27
FN1-204ENST00000356005 ADGBQ8N7X0 1667 aa13.36□□□□□ -0.27
FN1-204ENST00000356005 FMNL2Q96PY5 1086 aa13.36□□□□□ -0.27
FN1-204ENST00000356005 SIL1Q9H173 461 aa13.36□□□□□ -0.27
FN1-204ENST00000356005 NOB1Q9ULX3 412 aaKnown RBP13.36□□□□□ -0.27
FN1-204ENST00000356005 WAPLQ7Z5K2 1190 aa13.36□□□□□ -0.27
FN1-204ENST00000356005 ZNF608Q9ULD9 1512 aaPredicted RBP13.36□□□□□ -0.27
FN1-204ENST00000356005 RAB11FIP3O75154 756 aa13.36□□□□□ -0.27
FN1-204ENST00000356005 POLD1P28340 1107 aa13.35□□□□□ -0.27
FN1-204ENST00000356005 SMARCE1Q969G3 411 aa13.35□□□□□ -0.27
FN1-204ENST00000356005 DDX46Q7L014 1031 aaKnown RBP13.35□□□□□ -0.27
FN1-204ENST00000356005 TMEM87AQ8NBN3 555 aa13.35□□□□□ -0.27
FN1-204ENST00000356005 POLR3DP05423 398 aaPredicted RBP13.34□□□□□ -0.27
FN1-204ENST00000356005 ABCC11Q96J66 1382 aa13.34□□□□□ -0.27
FN1-204ENST00000356005 SRGAP3O43295 1099 aa13.34□□□□□ -0.27
FN1-204ENST00000356005 EXOSC9Q06265 439 aaKnown RBP13.34□□□□□ -0.27
FN1-204ENST00000356005 DHX8Q14562 1220 aaKnown RBP13.34□□□□□ -0.27
FN1-204ENST00000356005 EXOC6Q8TAG9 804 aa13.34□□□□□ -0.27
FN1-204ENST00000356005 AIDAQ96BJ3 306 aa13.34□□□□□ -0.27
FN1-204ENST00000356005 DNAJC5BQ9UF47 199 aa13.34□□□□□ -0.27
FN1-204ENST00000356005 CYP46A1Q9Y6A2 500 aa13.34□□□□□ -0.27
FN1-204ENST00000356005 LMTK3Q96Q04 1460 aa13.34□□□□□ -0.27
FN1-204ENST00000356005 ADAMTS12P58397 1594 aa13.34□□□□□ -0.27
FN1-204ENST00000356005 C22orf23Q9BZE7 217 aa13.34□□□□□ -0.27
FN1-204ENST00000356005 ABCF2Q9UG63 623 aa13.34□□□□□ -0.27
FN1-204ENST00000356005 PDE4AP27815 886 aa13.34□□□□□ -0.27
FN1-204ENST00000356005 SPTY2D1Q68D10 685 aaPredicted RBP13.34□□□□□ -0.27
FN1-204ENST00000356005 DACH1Q9UI36 760 aa13.34□□□□□ -0.27
FN1-204ENST00000356005 TTC21AQ8NDW8 1320 aa13.34□□□□□ -0.27
FN1-204ENST00000356005 ABCC10Q5T3U5 1492 aa13.34□□□□□ -0.27
FN1-204ENST00000356005 AACSQ86V21 672 aa13.34□□□□□ -0.27
FN1-204ENST00000356005 MKNK2Q9HBH9 465 aa13.34□□□□□ -0.27
FN1-204ENST00000356005 FOSBP53539 338 aa13.34□□□□□ -0.27
FN1-204ENST00000356005 HOMER1Q86YM7 354 aa13.34□□□□□ -0.27
FN1-204ENST00000356005 IFNL2Q8IZJ0 200 aa13.34□□□□□ -0.27
FN1-204ENST00000356005 PANK1Q8TE04 598 aa13.33□□□□□ -0.27
FN1-204ENST00000356005 MAP3K12Q12852 859 aa13.33□□□□□ -0.28
FN1-204ENST00000356005 IDI1Q13907 227 aa13.33□□□□□ -0.28
FN1-204ENST00000356005 PPP4R3BQ5MIZ7 849 aa13.33□□□□□ -0.28
FN1-204ENST00000356005 MATR3P43243 847 aaKnown RBP eCLIP13.33□□□□□ -0.289e-7■■□□□ 13.9
FN1-204ENST00000356005 KIAA0556O60303 1618 aa13.33□□□□□ -0.28
FN1-204ENST00000356005 IMMTQ16891 758 aaKnown RBP13.33□□□□□ -0.28
FN1-204ENST00000356005 AEBP1Q8IUX7 1158 aa13.33□□□□□ -0.28
FN1-204ENST00000356005 IFT57Q9NWB7 429 aa13.32□□□□□ -0.28
FN1-204ENST00000356005 CCDC196A0A1B0GTZ2 297 aa13.32□□□□□ -0.28
FN1-204ENST00000356005 U3KPZ7 1027 aaPredicted RBP13.32□□□□□ -0.28
FN1-204ENST00000356005 ANKRD18BA2A2Z9 1011 aa13.32□□□□□ -0.28
FN1-204ENST00000356005 CEBPAP49715 358 aaPredicted RBP13.32□□□□□ -0.28
FN1-204ENST00000356005 RUFY1Q96T51 708 aa13.32□□□□□ -0.28
FN1-204ENST00000356005 BAG3O95817 575 aa13.32□□□□□ -0.28
FN1-204ENST00000356005 CUL5Q93034 780 aa13.31□□□□□ -0.28
FN1-204ENST00000356005 CEP131Q9UPN4 1083 aa13.31□□□□□ -0.28
FN1-204ENST00000356005 ABCC5O15440 1437 aa13.31□□□□□ -0.28
FN1-204ENST00000356005 TRMT112Q9UI30 125 aaKnown RBP13.31□□□□□ -0.28
FN1-204ENST00000356005 ZGPATQ8N5A5 531 aaKnown RBP13.31□□□□□ -0.28
FN1-204ENST00000356005 SCAF11Q99590 1463 aaKnown RBP13.31□□□□□ -0.28
FN1-204ENST00000356005 UHRF1BP1Q6BDS2 1440 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms