RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 HTATSF1O43719 755 aaKnown RBP17.68■□□□□ 0.42
HOXA1-202ENST00000355633 MAP3K5Q99683 1374 aa17.68■□□□□ 0.42
HOXA1-202ENST00000355633 COL5A2P05997 1499 aaPredicted RBP17.68■□□□□ 0.42
HOXA1-202ENST00000355633 GNAT3A8MTJ3 354 aa17.67■□□□□ 0.42
HOXA1-202ENST00000355633 AMOTQ4VCS5 1084 aa17.67■□□□□ 0.42
HOXA1-202ENST00000355633 PLEKHO1Q53GL0 409 aaPredicted RBP17.67■□□□□ 0.42
HOXA1-202ENST00000355633 ZNF853P0CG23 659 aa17.67■□□□□ 0.42
HOXA1-202ENST00000355633 CFAP44Q96MT7 982 aa17.67■□□□□ 0.42
HOXA1-202ENST00000355633 WDR17Q8IZU2 1322 aa17.67■□□□□ 0.42
HOXA1-202ENST00000355633 RAPGEF4Q8WZA2 1011 aa17.66■□□□□ 0.42
HOXA1-202ENST00000355633 COL14A1Q05707 1796 aaKnown RBP17.66■□□□□ 0.42
HOXA1-202ENST00000355633 EXOSC9Q06265 439 aaKnown RBP17.65■□□□□ 0.42
HOXA1-202ENST00000355633 CT47B1P0C2W7 299 aaPredicted RBP17.65■□□□□ 0.42
HOXA1-202ENST00000355633 TOM1L2Q6ZVM7 507 aa17.64■□□□□ 0.41
HOXA1-202ENST00000355633 MBIPQ9NS73 344 aa17.64■□□□□ 0.41
HOXA1-202ENST00000355633 CRB1P82279 1406 aa17.64■□□□□ 0.41
HOXA1-202ENST00000355633 LRRC37A3O60309 1634 aa17.64■□□□□ 0.41
HOXA1-202ENST00000355633 TATP17735 454 aaPredicted RBP17.64■□□□□ 0.41
HOXA1-202ENST00000355633 EVA1CP58658 441 aa17.64■□□□□ 0.41
HOXA1-202ENST00000355633 ZNF530Q6P9A1 599 aaPredicted RBP17.64■□□□□ 0.41
HOXA1-202ENST00000355633 STRN4Q9NRL3 753 aa17.63■□□□□ 0.41
HOXA1-202ENST00000355633 PLEKHG2Q9H7P9 1386 aa17.63■□□□□ 0.41
HOXA1-202ENST00000355633 MEGF6O75095 1541 aa17.62■□□□□ 0.41
HOXA1-202ENST00000355633 AKAP4Q5JQC9 854 aa17.62■□□□□ 0.41
HOXA1-202ENST00000355633 ERICH6BQ5W0A0 696 aa17.62■□□□□ 0.41
HOXA1-202ENST00000355633 C1orf141Q5JVX7 400 aa17.62■□□□□ 0.41
HOXA1-202ENST00000355633 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.62■□□□□ 0.41
HOXA1-202ENST00000355633 PLIN1O60240 522 aa17.61■□□□□ 0.41
HOXA1-202ENST00000355633 BCAR3O75815 825 aa17.61■□□□□ 0.41
HOXA1-202ENST00000355633 RARSP54136 660 aaKnown RBP17.61■□□□□ 0.41
HOXA1-202ENST00000355633 IL17REQ8NFR9 667 aa17.61■□□□□ 0.41
HOXA1-202ENST00000355633 BTG4Q9NY30 223 aa17.61■□□□□ 0.41
HOXA1-202ENST00000355633 CHL1O00533 1208 aa17.6■□□□□ 0.41
HOXA1-202ENST00000355633 CARD10Q9BWT7 1032 aa17.6■□□□□ 0.41
HOXA1-202ENST00000355633 LARP1Q6PKG0 1096 aaKnown RBP17.6■□□□□ 0.41
HOXA1-202ENST00000355633 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.6■□□□□ 0.41
HOXA1-202ENST00000355633 SPG7Q9UQ90 795 aa17.59■□□□□ 0.41
HOXA1-202ENST00000355633 PKD1L3Q7Z443 1732 aa17.59■□□□□ 0.41
HOXA1-202ENST00000355633 PARP4Q9UKK3 1724 aaKnown RBP17.59■□□□□ 0.41
HOXA1-202ENST00000355633 ADAMTS2O95450 1211 aa17.59■□□□□ 0.41
HOXA1-202ENST00000355633 CEMIPQ8WUJ3 1361 aa17.58■□□□□ 0.4
HOXA1-202ENST00000355633 JCADQ9P266 1359 aa17.58■□□□□ 0.4
HOXA1-202ENST00000355633 NUTM2BA6NNL0 878 aaPredicted RBP17.58■□□□□ 0.4
HOXA1-202ENST00000355633 NUTM2EB1AL46 878 aaPredicted RBP17.58■□□□□ 0.4
HOXA1-202ENST00000355633 NUTM2AQ8IVF1 878 aaPredicted RBP17.58■□□□□ 0.4
HOXA1-202ENST00000355633 PLCH1Q4KWH8 1693 aa17.57■□□□□ 0.4
HOXA1-202ENST00000355633 VIRMAQ69YN4 1812 aaKnown RBP17.57■□□□□ 0.4
HOXA1-202ENST00000355633 OVOS2A0A0G2JMS6 1433 aa17.57■□□□□ 0.4
HOXA1-202ENST00000355633 TSPYL4Q9UJ04 414 aa17.57■□□□□ 0.4
HOXA1-202ENST00000355633 MPRIPQ6WCQ1 1025 aa17.56■□□□□ 0.4
HOXA1-202ENST00000355633 ZNF428Q96B54 188 aa17.56■□□□□ 0.4
HOXA1-202ENST00000355633 BCL2L13Q9BXK5 485 aa17.56■□□□□ 0.4
HOXA1-202ENST00000355633 LGR6Q9HBX8 967 aa17.56■□□□□ 0.4
HOXA1-202ENST00000355633 TAF7Q15545 349 aaPredicted RBP17.55■□□□□ 0.4
HOXA1-202ENST00000355633 MIS18AQ9NYP9 233 aa17.55■□□□□ 0.4
HOXA1-202ENST00000355633 RNMTO43148 476 aaKnown RBP17.55■□□□□ 0.4
HOXA1-202ENST00000355633 IL2RBP14784 551 aa17.55■□□□□ 0.4
HOXA1-202ENST00000355633 TWISTNBQ3B726 338 aaPredicted RBP17.55■□□□□ 0.4
HOXA1-202ENST00000355633 TSPYL6Q8N831 410 aa17.55■□□□□ 0.4
HOXA1-202ENST00000355633 BABAM1Q9NWV8 329 aa17.55■□□□□ 0.4
HOXA1-202ENST00000355633 ELL2O00472 640 aaPredicted RBP17.54■□□□□ 0.4
HOXA1-202ENST00000355633 VAMP4O75379 141 aa17.54■□□□□ 0.4
HOXA1-202ENST00000355633 PHKG2P15735 406 aa17.54■□□□□ 0.4
HOXA1-202ENST00000355633 IFNL2Q8IZJ0 200 aa17.54■□□□□ 0.4
HOXA1-202ENST00000355633 C8orf58Q8NAV2 365 aa17.54■□□□□ 0.4
HOXA1-202ENST00000355633 SMC4Q9NTJ3 1288 aa17.54■□□□□ 0.4
HOXA1-202ENST00000355633 ADAMTS7Q9UKP4 1686 aa17.54■□□□□ 0.4
HOXA1-202ENST00000355633 CANXP27824 592 aaKnown RBP17.54■□□□□ 0.4
HOXA1-202ENST00000355633 TEFQ10587 303 aa17.54■□□□□ 0.4
HOXA1-202ENST00000355633 ALDH1L2Q3SY69 923 aa17.54■□□□□ 0.4
HOXA1-202ENST00000355633 SSH1Q8WYL5 1049 aa17.54■□□□□ 0.4
HOXA1-202ENST00000355633 FRAT1Q92837 279 aaPredicted RBP17.53■□□□□ 0.4
HOXA1-202ENST00000355633 USP35Q9P2H5 1018 aa17.53■□□□□ 0.4
HOXA1-202ENST00000355633 NRAPQ86VF7 1730 aa17.53■□□□□ 0.4
HOXA1-202ENST00000355633 C20orf194Q5TEA3 1177 aa17.52■□□□□ 0.4
HOXA1-202ENST00000355633 PPP4R2Q9NY27 417 aa17.52■□□□□ 0.4
HOXA1-202ENST00000355633 NWD2Q9ULI1 1742 aa17.52■□□□□ 0.39
HOXA1-202ENST00000355633 SCN11AQ9UI33 1791 aa17.52■□□□□ 0.39
HOXA1-202ENST00000355633 CYP27B1O15528 508 aa17.51■□□□□ 0.39
HOXA1-202ENST00000355633 KRT24Q2M2I5 525 aa17.51■□□□□ 0.39
HOXA1-202ENST00000355633 ZCRB1Q8TBF4 217 aaKnown RBP17.51■□□□□ 0.39
HOXA1-202ENST00000355633 EXOC6Q8TAG9 804 aa17.5■□□□□ 0.39
HOXA1-202ENST00000355633 PCDH11XQ9BZA7 1347 aa17.5■□□□□ 0.39
HOXA1-202ENST00000355633 PCDH11YQ9BZA8 1340 aa17.5■□□□□ 0.39
HOXA1-202ENST00000355633 SPATA31A6Q5VVP1 1343 aa17.5■□□□□ 0.39
HOXA1-202ENST00000355633 HSP90AB1P08238 724 aaKnown RBP17.5■□□□□ 0.39
HOXA1-202ENST00000355633 CRBNQ96SW2 442 aa17.5■□□□□ 0.39
HOXA1-202ENST00000355633 KDM3BQ7LBC6 1761 aa17.49■□□□□ 0.39
HOXA1-202ENST00000355633 SLIT2O94813 1529 aa17.49■□□□□ 0.39
HOXA1-202ENST00000355633 KDM6AO15550 1401 aaPredicted RBP17.49■□□□□ 0.39
HOXA1-202ENST00000355633 PDE3AQ14432 1141 aa17.49■□□□□ 0.39
HOXA1-202ENST00000355633 SIPA1L3O60292 1781 aaPredicted RBP17.49■□□□□ 0.39
HOXA1-202ENST00000355633 KIF16BQ96L93 1317 aa17.49■□□□□ 0.39
HOXA1-202ENST00000355633 HSPA1LP34931 641 aa17.48■□□□□ 0.39
HOXA1-202ENST00000355633 DCAF5Q96JK2 942 aa17.48■□□□□ 0.39
HOXA1-202ENST00000355633 SHANK3Q9BYB0 1731 aa17.48■□□□□ 0.39
HOXA1-202ENST00000355633 ZKSCAN2Q63HK3 967 aa17.48■□□□□ 0.39
HOXA1-202ENST00000355633 BTBD11A6QL63 1104 aa17.47■□□□□ 0.39
HOXA1-202ENST00000355633 BRPF1P55201 1214 aaPredicted RBP17.47■□□□□ 0.39
HOXA1-202ENST00000355633 DISP2A7MBM2 1401 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms