RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 AXIN2Q9Y2T1 843 aa29.41■■■□□ 2.3
SCAMP3-202ENST00000355379 MCM10Q7L590 875 aa29.4■■■□□ 2.3
SCAMP3-202ENST00000355379 USHBP1Q8N6Y0 703 aa29.4■■■□□ 2.3
SCAMP3-202ENST00000355379 ABCA3Q99758 1704 aa29.4■■■□□ 2.3
SCAMP3-202ENST00000355379 GNAT3A8MTJ3 354 aa29.4■■■□□ 2.3
SCAMP3-202ENST00000355379 MAP3K5Q99683 1374 aa29.39■■■□□ 2.3
SCAMP3-202ENST00000355379 LRRC59Q96AG4 307 aaKnown RBP29.39■■■□□ 2.3
SCAMP3-202ENST00000355379 ERBB3P21860 1342 aa29.38■■■□□ 2.29
SCAMP3-202ENST00000355379 BRPF1P55201 1214 aaPredicted RBP29.38■■■□□ 2.29
SCAMP3-202ENST00000355379 SSH1Q8WYL5 1049 aa29.38■■■□□ 2.29
SCAMP3-202ENST00000355379 FRAT1Q92837 279 aaPredicted RBP29.38■■■□□ 2.29
SCAMP3-202ENST00000355379 SMC4Q9NTJ3 1288 aa29.38■■■□□ 2.29
SCAMP3-202ENST00000355379 VAMP4O75379 141 aa29.37■■■□□ 2.29
SCAMP3-202ENST00000355379 MS4A1P11836 297 aa29.37■■■□□ 2.29
SCAMP3-202ENST00000355379 CABLES1Q8TDN4 633 aa29.37■■■□□ 2.29
SCAMP3-202ENST00000355379 BCL2L13Q9BXK5 485 aa29.36■■■□□ 2.29
SCAMP3-202ENST00000355379 ZKSCAN2Q63HK3 967 aa29.35■■■□□ 2.29
SCAMP3-202ENST00000355379 KIAA0232Q92628 1395 aa29.34■■■□□ 2.29
SCAMP3-202ENST00000355379 AMOTQ4VCS5 1084 aa29.34■■■□□ 2.29
SCAMP3-202ENST00000355379 KIF16BQ96L93 1317 aa29.33■■■□□ 2.29
SCAMP3-202ENST00000355379 PLEKHO1Q53GL0 409 aaPredicted RBP29.33■■■□□ 2.29
SCAMP3-202ENST00000355379 HAP1P54257 671 aaPredicted RBP29.32■■■□□ 2.28
SCAMP3-202ENST00000355379 AAMPQ13685 434 aa29.32■■■□□ 2.28
SCAMP3-202ENST00000355379 TWISTNBQ3B726 338 aaPredicted RBP29.32■■■□□ 2.28
SCAMP3-202ENST00000355379 BABAM1Q9NWV8 329 aa29.32■■■□□ 2.28
SCAMP3-202ENST00000355379 PLEKHG2Q9H7P9 1386 aa29.32■■■□□ 2.28
SCAMP3-202ENST00000355379 ROBO1Q9Y6N7 1651 aa29.31■■■□□ 2.28
SCAMP3-202ENST00000355379 TSPYL6Q8N831 410 aa29.3■■■□□ 2.28
SCAMP3-202ENST00000355379 C8orf58Q8NAV2 365 aa29.3■■■□□ 2.28
SCAMP3-202ENST00000355379 AHDC1Q5TGY3 1603 aaPredicted RBP29.3■■■□□ 2.28
SCAMP3-202ENST00000355379 IPO8O15397 1037 aaKnown RBP29.3■■■□□ 2.28
SCAMP3-202ENST00000355379 PANK1Q8TE04 598 aa29.3■■■□□ 2.28
SCAMP3-202ENST00000355379 VIRMAQ69YN4 1812 aaKnown RBP29.29■■■□□ 2.28
SCAMP3-202ENST00000355379 IL17REQ8NFR9 667 aa29.28■■■□□ 2.28
SCAMP3-202ENST00000355379 AKAP4Q5JQC9 854 aa29.27■■■□□ 2.28
SCAMP3-202ENST00000355379 CEMIPQ8WUJ3 1361 aa29.27■■■□□ 2.28
SCAMP3-202ENST00000355379 ATF7IPQ6VMQ6 1270 aa29.26■■■□□ 2.27
SCAMP3-202ENST00000355379 DZIP1LQ8IYY4 767 aaKnown RBP29.26■■■□□ 2.27
SCAMP3-202ENST00000355379 MRPL50Q8N5N7 158 aaKnown RBP29.26■■■□□ 2.27
SCAMP3-202ENST00000355379 NOB1Q9ULX3 412 aaKnown RBP29.26■■■□□ 2.27
SCAMP3-202ENST00000355379 COG6Q9Y2V7 657 aa29.26■■■□□ 2.27
SCAMP3-202ENST00000355379 TSPYL4Q9UJ04 414 aa29.25■■■□□ 2.27
SCAMP3-202ENST00000355379 OVOS2A0A0G2JMS6 1433 aa29.25■■■□□ 2.27
SCAMP3-202ENST00000355379 RLBP1P12271 317 aa29.25■■■□□ 2.27
SCAMP3-202ENST00000355379 CHRNA2Q15822 529 aa29.25■■■□□ 2.27
SCAMP3-202ENST00000355379 ARHGAP45Q92619 1136 aa29.24■■■□□ 2.27
SCAMP3-202ENST00000355379 TNNQ9UQP3 1299 aa29.24■■■□□ 2.27
SCAMP3-202ENST00000355379 TAF7Q15545 349 aaPredicted RBP29.23■■■□□ 2.27
SCAMP3-202ENST00000355379 ZNF530Q6P9A1 599 aaPredicted RBP29.23■■■□□ 2.27
SCAMP3-202ENST00000355379 ADAMTS7Q9UKP4 1686 aa29.22■■■□□ 2.27
SCAMP3-202ENST00000355379 TRIM27P14373 513 aa29.22■■■□□ 2.27
SCAMP3-202ENST00000355379 FTSJ3Q8IY81 847 aaKnown RBP29.22■■■□□ 2.27
SCAMP3-202ENST00000355379 NLRP2Q9NX02 1062 aa29.22■■■□□ 2.27
SCAMP3-202ENST00000355379 ELL2O00472 640 aaPredicted RBP29.21■■■□□ 2.27
SCAMP3-202ENST00000355379 MVPQ14764 893 aaKnown RBP29.21■■■□□ 2.27
SCAMP3-202ENST00000355379 COL22A1Q8NFW1 1626 aaPredicted RBP29.21■■■□□ 2.27
SCAMP3-202ENST00000355379 SOS1Q07889 1333 aaPredicted RBP29.2■■■□□ 2.27
SCAMP3-202ENST00000355379 PRDM11Q9NQV5 511 aa29.2■■■□□ 2.27
SCAMP3-202ENST00000355379 CSB-PGBD3P0DP91 1061 aa29.2■■■□□ 2.26
SCAMP3-202ENST00000355379 RAPGEF4Q8WZA2 1011 aa29.2■■■□□ 2.26
SCAMP3-202ENST00000355379 CLUAP1Q96AJ1 413 aa29.2■■■□□ 2.26
SCAMP3-202ENST00000355379 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.2■■■□□ 2.26
SCAMP3-202ENST00000355379 KDM3BQ7LBC6 1761 aa29.19■■■□□ 2.26
SCAMP3-202ENST00000355379 C1orf141Q5JVX7 400 aa29.19■■■□□ 2.26
SCAMP3-202ENST00000355379 PKD1L3Q7Z443 1732 aa29.18■■■□□ 2.26
SCAMP3-202ENST00000355379 KDM2BQ8NHM5 1336 aa29.18■■■□□ 2.26
SCAMP3-202ENST00000355379 TATP17735 454 aaPredicted RBP29.18■■■□□ 2.26
SCAMP3-202ENST00000355379 CENPQQ7L2Z9 268 aaPredicted RBP29.17■■■□□ 2.26
SCAMP3-202ENST00000355379 MIS18AQ9NYP9 233 aa29.17■■■□□ 2.26
SCAMP3-202ENST00000355379 COL5A2P05997 1499 aaPredicted RBP29.16■■■□□ 2.26
SCAMP3-202ENST00000355379 SIPA1L3O60292 1781 aaPredicted RBP29.16■■■□□ 2.26
SCAMP3-202ENST00000355379 WDR17Q8IZU2 1322 aa29.16■■■□□ 2.26
SCAMP3-202ENST00000355379 KRT24Q2M2I5 525 aa29.15■■■□□ 2.26
SCAMP3-202ENST00000355379 PARP4Q9UKK3 1724 aaKnown RBP29.14■■■□□ 2.26
SCAMP3-202ENST00000355379 MEGF6O75095 1541 aa29.14■■■□□ 2.26
SCAMP3-202ENST00000355379 RNMTO43148 476 aaKnown RBP29.14■■■□□ 2.25
SCAMP3-202ENST00000355379 LGR6Q9HBX8 967 aa29.14■■■□□ 2.25
SCAMP3-202ENST00000355379 DDX19BQ9UMR2 479 aa29.14■■■□□ 2.25
SCAMP3-202ENST00000355379 SPG7Q9UQ90 795 aa29.14■■■□□ 2.25
SCAMP3-202ENST00000355379 CACNA1FO60840 1977 aa29.14■■■□□ 2.25
SCAMP3-202ENST00000355379 SCN11AQ9UI33 1791 aa29.13■■■□□ 2.25
SCAMP3-202ENST00000355379 TSHZ2Q9NRE2 1034 aa29.13■■■□□ 2.25
SCAMP3-202ENST00000355379 API5Q9BZZ5 524 aaKnown RBP29.11■■■□□ 2.25
SCAMP3-202ENST00000355379 PHLPP1O60346 1717 aa29.11■■■□□ 2.25
SCAMP3-202ENST00000355379 COL14A1Q05707 1796 aaKnown RBP29.1■■■□□ 2.25
SCAMP3-202ENST00000355379 TEFQ10587 303 aa29.1■■■□□ 2.25
SCAMP3-202ENST00000355379 MPRIPQ6WCQ1 1025 aa29.1■■■□□ 2.25
SCAMP3-202ENST00000355379 TMEM57Q8N5G2 664 aa29.1■■■□□ 2.25
SCAMP3-202ENST00000355379 ABCC4O15439 1325 aa29.08■■■□□ 2.25
SCAMP3-202ENST00000355379 COL16A1Q07092 1604 aaPredicted RBP29.07■■■□□ 2.24
SCAMP3-202ENST00000355379 TCERG1O14776 1098 aaKnown RBP29.07■■■□□ 2.24
SCAMP3-202ENST00000355379 ITPRIPQ8IWB1 547 aa29.07■■■□□ 2.24
SCAMP3-202ENST00000355379 CARD10Q9BWT7 1032 aa29.06■■■□□ 2.24
SCAMP3-202ENST00000355379 CHMP4BQ9H444 224 aaKnown RBP29.06■■■□□ 2.24
SCAMP3-202ENST00000355379 PTPRCP08575 1304 aa29.06■■■□□ 2.24
SCAMP3-202ENST00000355379 PHKG2P15735 406 aa29.05■■■□□ 2.24
SCAMP3-202ENST00000355379 TOM1O60784 492 aa29.04■■■□□ 2.24
SCAMP3-202ENST00000355379 TOM1L2Q6ZVM7 507 aa29.04■■■□□ 2.24
SCAMP3-202ENST00000355379 IFNL2Q8IZJ0 200 aa29.04■■■□□ 2.24
SCAMP3-202ENST00000355379 BTBD11A6QL63 1104 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms