RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 AAMPQ13685 434 aa17.1■□□□□ 0.33
EBF3-201ENST00000355311 PKP1Q13835 747 aa17.1■□□□□ 0.33
EBF3-201ENST00000355311 TNPO1Q92973 898 aaKnown RBP17.1■□□□□ 0.33
EBF3-201ENST00000355311 SSFA2P28290 1259 aa17.1■□□□□ 0.33
EBF3-201ENST00000355311 ARID3AQ99856 593 aa17.1■□□□□ 0.33
EBF3-201ENST00000355311 CLCN1P35523 988 aa17.09■□□□□ 0.33
EBF3-201ENST00000355311 CALD1Q05682 793 aaKnown RBP17.09■□□□□ 0.33
EBF3-201ENST00000355311 FKBP5Q13451 457 aaPredicted RBP17.09■□□□□ 0.33
EBF3-201ENST00000355311 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.09■□□□□ 0.33
EBF3-201ENST00000355311 API5Q9BZZ5 524 aaKnown RBP17.09■□□□□ 0.33
EBF3-201ENST00000355311 ADGRB2O60241 1585 aa17.09■□□□□ 0.33
EBF3-201ENST00000355311 TRHP20396 242 aaPredicted RBP17.08■□□□□ 0.32
EBF3-201ENST00000355311 LARP6Q9BRS8 491 aaKnown RBP17.08■□□□□ 0.32
EBF3-201ENST00000355311 IL1RAPL2Q9NP60 686 aa17.08■□□□□ 0.32
EBF3-201ENST00000355311 MSH6P52701 1360 aa17.08■□□□□ 0.32
EBF3-201ENST00000355311 ABTB2Q8N961 1025 aa17.07■□□□□ 0.32
EBF3-201ENST00000355311 RILPL2Q969X0 211 aa17.07■□□□□ 0.32
EBF3-201ENST00000355311 BMP2KLQ5H9B9 411 aa17.07■□□□□ 0.32
EBF3-201ENST00000355311 GCC1Q96CN9 775 aa17.07■□□□□ 0.32
EBF3-201ENST00000355311 EDC4Q6P2E9 1401 aaKnown RBP17.07■□□□□ 0.32
EBF3-201ENST00000355311 SDSP20132 328 aa17.07■□□□□ 0.32
EBF3-201ENST00000355311 ZNF692Q9BU19 519 aaPredicted RBP17.07■□□□□ 0.32
EBF3-201ENST00000355311 LMOD3Q0VAK6 560 aa17.06■□□□□ 0.32
EBF3-201ENST00000355311 CEP85Q6P2H3 762 aa17.06■□□□□ 0.32
EBF3-201ENST00000355311 ABCC4O15439 1325 aa17.06■□□□□ 0.32
EBF3-201ENST00000355311 CPSF1Q10570 1443 aaKnown RBP17.05■□□□□ 0.32
EBF3-201ENST00000355311 TRIM6-TRIM34B2RNG4 842 aa17.05■□□□□ 0.32
EBF3-201ENST00000355311 CHL1O00533 1208 aa17.05■□□□□ 0.32
EBF3-201ENST00000355311 HDGFP51858 240 aaKnown RBP17.05■□□□□ 0.32
EBF3-201ENST00000355311 AK9Q5TCS8 1911 aa17.05■□□□□ 0.32
EBF3-201ENST00000355311 PHAXQ9H814 394 aaKnown RBP17.05■□□□□ 0.32
EBF3-201ENST00000355311 TNRQ92752 1358 aa17.04■□□□□ 0.32
EBF3-201ENST00000355311 RRP9O43818 475 aaKnown RBP17.04■□□□□ 0.32
EBF3-201ENST00000355311 KCNA6P17658 529 aa17.04■□□□□ 0.32
EBF3-201ENST00000355311 ZGPATQ8N5A5 531 aaKnown RBP17.04■□□□□ 0.32
EBF3-201ENST00000355311 EID1Q9Y6B2 187 aa17.04■□□□□ 0.32
EBF3-201ENST00000355311 MED14O60244 1454 aa17.04■□□□□ 0.32
EBF3-201ENST00000355311 PNMA6EA0A0J9YXQ4 647 aa17.04■□□□□ 0.32
EBF3-201ENST00000355311 FSD2A1L4K1 749 aa17.03■□□□□ 0.32
EBF3-201ENST00000355311 DCTPP1Q9H773 170 aa17.03■□□□□ 0.32
EBF3-201ENST00000355311 PPP6R1Q9UPN7 881 aa17.03■□□□□ 0.32
EBF3-201ENST00000355311 KCNQ3O43525 872 aa17.02■□□□□ 0.32
EBF3-201ENST00000355311 CDC45O75419 566 aa17.02■□□□□ 0.32
EBF3-201ENST00000355311 LRRC59Q96AG4 307 aaKnown RBP17.02■□□□□ 0.32
EBF3-201ENST00000355311 ESPNB1AK53 854 aa17.02■□□□□ 0.31
EBF3-201ENST00000355311 GAS2L3Q86XJ1 694 aa17.02■□□□□ 0.31
EBF3-201ENST00000355311 USP32Q8NFA0 1604 aa17.02■□□□□ 0.31
EBF3-201ENST00000355311 ARHGAP45Q92619 1136 aa17.01■□□□□ 0.31
EBF3-201ENST00000355311 RBM25P49756 843 aaKnown RBP17.01■□□□□ 0.31
EBF3-201ENST00000355311 RBM10P98175 930 aaKnown RBP17.01■□□□□ 0.31
EBF3-201ENST00000355311 NUTM1Q86Y26 1132 aa17.01■□□□□ 0.31
EBF3-201ENST00000355311 DDX54Q8TDD1 881 aaKnown RBP17.01■□□□□ 0.31
EBF3-201ENST00000355311 TMEM2Q9UHN6 1383 aa17■□□□□ 0.31
EBF3-201ENST00000355311 TTC22Q5TAA0 569 aa17■□□□□ 0.31
EBF3-201ENST00000355311 LGR6Q9HBX8 967 aa17■□□□□ 0.31
EBF3-201ENST00000355311 K7ELQ4 463 aaPredicted RBP17■□□□□ 0.31
EBF3-201ENST00000355311 MCTP1Q6DN14 999 aa17■□□□□ 0.31
EBF3-201ENST00000355311 ANKRD44Q8N8A2 993 aa17■□□□□ 0.31
EBF3-201ENST00000355311 STK31Q9BXU1 1019 aa16.99■□□□□ 0.31
EBF3-201ENST00000355311 GRPEL1Q9HAV7 217 aa16.99■□□□□ 0.31
EBF3-201ENST00000355311 IL17REQ8NFR9 667 aa16.99■□□□□ 0.31
EBF3-201ENST00000355311 LRRFIP2Q9Y608 721 aaKnown RBP16.99■□□□□ 0.31
EBF3-201ENST00000355311 UNC5CLQ8IV45 518 aa16.98■□□□□ 0.31
EBF3-201ENST00000355311 UPF3BQ9BZI7 483 aaKnown RBP16.98■□□□□ 0.31
EBF3-201ENST00000355311 INTS3Q68E01 1043 aaKnown RBP16.98■□□□□ 0.31
EBF3-201ENST00000355311 FLIIQ13045 1269 aa16.97■□□□□ 0.31
EBF3-201ENST00000355311 MPRIPQ6WCQ1 1025 aa16.97■□□□□ 0.31
EBF3-201ENST00000355311 ATP7BP35670 1465 aa16.97■□□□□ 0.31
EBF3-201ENST00000355311 ESCO1Q5FWF5 840 aa16.97■□□□□ 0.31
EBF3-201ENST00000355311 RTL1A6NKG5 1358 aa16.97■□□□□ 0.31
EBF3-201ENST00000355311 TRIM44Q96DX7 344 aaPredicted RBP16.96■□□□□ 0.31
EBF3-201ENST00000355311 PTPRUQ92729 1446 aa16.96■□□□□ 0.31
EBF3-201ENST00000355311 PRAMEF22A3QJZ6 481 aa16.96■□□□□ 0.31
EBF3-201ENST00000355311 PIP4K2AP48426 406 aaPredicted RBP16.96■□□□□ 0.31
EBF3-201ENST00000355311 NCBP3Q53F19 620 aaKnown RBP16.96■□□□□ 0.31
EBF3-201ENST00000355311 USP26Q9BXU7 913 aa16.96■□□□□ 0.31
EBF3-201ENST00000355311 JARID2Q92833 1246 aaPredicted RBP16.95■□□□□ 0.3
EBF3-201ENST00000355311 ANO2Q9NQ90 1003 aa16.95■□□□□ 0.3
EBF3-201ENST00000355311 NEK4P51957 841 aa16.95■□□□□ 0.3
EBF3-201ENST00000355311 DDX49Q9Y6V7 483 aaKnown RBP16.95■□□□□ 0.3
EBF3-201ENST00000355311 KIF20BQ96Q89 1820 aa16.95■□□□□ 0.3
EBF3-201ENST00000355311 DLG5Q8TDM6 1919 aa16.95■□□□□ 0.3
EBF3-201ENST00000355311 RIMS1Q86UR5 1692 aaKnown RBP16.94■□□□□ 0.3
EBF3-201ENST00000355311 MPNDQ8N594 471 aa16.94■□□□□ 0.3
EBF3-201ENST00000355311 IL25Q9H293 177 aa16.94■□□□□ 0.3
EBF3-201ENST00000355311 RBM27Q9P2N5 1060 aaKnown RBP16.94■□□□□ 0.3
EBF3-201ENST00000355311 SPATA31D1Q6ZQQ2 1576 aa16.94■□□□□ 0.3
EBF3-201ENST00000355311 PTCH1Q13635 1447 aa16.94■□□□□ 0.3
EBF3-201ENST00000355311 MRE11P49959 708 aa16.94■□□□□ 0.3
EBF3-201ENST00000355311 AIMP1Q12904 312 aaKnown RBP16.94■□□□□ 0.3
EBF3-201ENST00000355311 PALD1Q9ULE6 856 aa16.94■□□□□ 0.3
EBF3-201ENST00000355311 DLC1Q96QB1 1528 aa16.93■□□□□ 0.3
EBF3-201ENST00000355311 BRPF1P55201 1214 aaPredicted RBP16.93■□□□□ 0.3
EBF3-201ENST00000355311 DDX17Q92841 729 aaKnown RBP16.93■□□□□ 0.3
EBF3-201ENST00000355311 CCDC9Q9Y3X0 531 aaKnown RBP16.93■□□□□ 0.3
EBF3-201ENST00000355311 A0A0U1RQG5 324 aaPredicted RBP16.93■□□□□ 0.3
EBF3-201ENST00000355311 PLEKHG3A1L390 1219 aa16.93■□□□□ 0.3
EBF3-201ENST00000355311 PDE1AP54750 535 aa16.93■□□□□ 0.3
EBF3-201ENST00000355311 HDGFL1Q5TGJ6 251 aa16.93■□□□□ 0.3
EBF3-201ENST00000355311 PODXL2Q9NZ53 605 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms