RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 KDM3BQ7LBC6 1761 aa22.17■■□□□ 1.14
VPS13B-201ENST00000355155 MAP3K5Q99683 1374 aa22.17■■□□□ 1.14
VPS13B-201ENST00000355155 SIPA1L3O60292 1781 aaPredicted RBP22.16■■□□□ 1.14
VPS13B-201ENST00000355155 ZKSCAN2Q63HK3 967 aa22.16■■□□□ 1.14
VPS13B-201ENST00000355155 CEMIPQ8WUJ3 1361 aa22.16■■□□□ 1.14
VPS13B-201ENST00000355155 PKD1L3Q7Z443 1732 aa22.15■■□□□ 1.14
VPS13B-201ENST00000355155 AHDC1Q5TGY3 1603 aaPredicted RBP22.15■■□□□ 1.14
VPS13B-201ENST00000355155 HAP1P54257 671 aaPredicted RBP22.15■■□□□ 1.14
VPS13B-201ENST00000355155 THUMPD2Q9BTF0 503 aaKnown RBP22.15■■□□□ 1.14
VPS13B-201ENST00000355155 SLAIN2Q9P270 581 aa22.15■■□□□ 1.14
VPS13B-201ENST00000355155 FAM83GA6ND36 823 aa22.14■■□□□ 1.14
VPS13B-201ENST00000355155 NBPF6Q5VWK0 638 aa22.14■■□□□ 1.14
VPS13B-201ENST00000355155 NBPF4Q96M43 638 aa22.14■■□□□ 1.14
VPS13B-201ENST00000355155 XPCQ01831 940 aaPredicted RBP22.14■■□□□ 1.13
VPS13B-201ENST00000355155 COL22A1Q8NFW1 1626 aaPredicted RBP22.14■■□□□ 1.13
VPS13B-201ENST00000355155 MRPL50Q8N5N7 158 aaKnown RBP22.12■■□□□ 1.13
VPS13B-201ENST00000355155 GNAT3A8MTJ3 354 aa22.12■■□□□ 1.13
VPS13B-201ENST00000355155 CENPQQ7L2Z9 268 aaPredicted RBP22.12■■□□□ 1.13
VPS13B-201ENST00000355155 ERBB3P21860 1342 aa22.11■■□□□ 1.13
VPS13B-201ENST00000355155 SMC4Q9NTJ3 1288 aa22.11■■□□□ 1.13
VPS13B-201ENST00000355155 IPO8O15397 1037 aaKnown RBP22.11■■□□□ 1.13
VPS13B-201ENST00000355155 CACNA1FO60840 1977 aa22.11■■□□□ 1.13
VPS13B-201ENST00000355155 ATF7IPQ6VMQ6 1270 aa22.1■■□□□ 1.13
VPS13B-201ENST00000355155 ANKRD24Q8TF21 1146 aa22.1■■□□□ 1.13
VPS13B-201ENST00000355155 AMOTQ4VCS5 1084 aa22.1■■□□□ 1.13
VPS13B-201ENST00000355155 N4BP2Q86UW6 1770 aaPredicted RBP22.1■■□□□ 1.13
VPS13B-201ENST00000355155 MVPQ14764 893 aaKnown RBP22.09■■□□□ 1.13
VPS13B-201ENST00000355155 PARP4Q9UKK3 1724 aaKnown RBP22.09■■□□□ 1.13
VPS13B-201ENST00000355155 RLBP1P12271 317 aa22.09■■□□□ 1.13
VPS13B-201ENST00000355155 DCTN1Q14203 1278 aa22.09■■□□□ 1.13
VPS13B-201ENST00000355155 DZIP1LQ8IYY4 767 aaKnown RBP22.09■■□□□ 1.13
VPS13B-201ENST00000355155 TWISTNBQ3B726 338 aaPredicted RBP22.08■■□□□ 1.13
VPS13B-201ENST00000355155 RTF1Q92541 710 aaKnown RBP22.08■■□□□ 1.13
VPS13B-201ENST00000355155 MCM10Q7L590 875 aa22.08■■□□□ 1.13
VPS13B-201ENST00000355155 CLUAP1Q96AJ1 413 aa22.08■■□□□ 1.13
VPS13B-201ENST00000355155 AXIN2Q9Y2T1 843 aa22.08■■□□□ 1.13
VPS13B-201ENST00000355155 TRIM27P14373 513 aa22.07■■□□□ 1.12
VPS13B-201ENST00000355155 C8orf58Q8NAV2 365 aa22.07■■□□□ 1.12
VPS13B-201ENST00000355155 TSPYL6Q8N831 410 aa22.07■■□□□ 1.12
VPS13B-201ENST00000355155 PANK1Q8TE04 598 aa22.07■■□□□ 1.12
VPS13B-201ENST00000355155 CANXP27824 592 aaKnown RBP22.07■■□□□ 1.12
VPS13B-201ENST00000355155 SCN11AQ9UI33 1791 aa22.06■■□□□ 1.12
VPS13B-201ENST00000355155 NOB1Q9ULX3 412 aaKnown RBP22.06■■□□□ 1.12
VPS13B-201ENST00000355155 AKAP4Q5JQC9 854 aa22.05■■□□□ 1.12
VPS13B-201ENST00000355155 DDX17Q92841 729 aaKnown RBP22.05■■□□□ 1.12
VPS13B-201ENST00000355155 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.05■■□□□ 1.122e-7■■■■■ 29
VPS13B-201ENST00000355155 ABCC4O15439 1325 aa22.04■■□□□ 1.12
VPS13B-201ENST00000355155 PLEKHO1Q53GL0 409 aaPredicted RBP22.04■■□□□ 1.12
VPS13B-201ENST00000355155 IL17REQ8NFR9 667 aa22.04■■□□□ 1.12
VPS13B-201ENST00000355155 FRAT1Q92837 279 aaPredicted RBP22.04■■□□□ 1.12
VPS13B-201ENST00000355155 COG6Q9Y2V7 657 aa22.04■■□□□ 1.12
VPS13B-201ENST00000355155 ROBO1Q9Y6N7 1651 aa22.04■■□□□ 1.12
VPS13B-201ENST00000355155 LAS1LQ9Y4W2 734 aaKnown RBP22.03■■□□□ 1.12
VPS13B-201ENST00000355155 MRC1P22897 1456 aa22.03■■□□□ 1.12
VPS13B-201ENST00000355155 LTV1Q96GA3 475 aaPredicted RBP22.03■■□□□ 1.12
VPS13B-201ENST00000355155 BCL2L13Q9BXK5 485 aa22.03■■□□□ 1.12
VPS13B-201ENST00000355155 RGS12O14924 1447 aa22.02■■□□□ 1.12
VPS13B-201ENST00000355155 DDX19BQ9UMR2 479 aa22.02■■□□□ 1.12
VPS13B-201ENST00000355155 TNNQ9UQP3 1299 aa22.02■■□□□ 1.12
VPS13B-201ENST00000355155 TCERG1O14776 1098 aaKnown RBP22.02■■□□□ 1.11
VPS13B-201ENST00000355155 LRRC59Q96AG4 307 aaKnown RBP22.01■■□□□ 1.11
VPS13B-201ENST00000355155 TAF7Q15545 349 aaPredicted RBP22■■□□□ 1.11
VPS13B-201ENST00000355155 USHBP1Q8N6Y0 703 aa22■■□□□ 1.11
VPS13B-201ENST00000355155 LMOD2Q6P5Q4 547 aa21.99■■□□□ 1.11
VPS13B-201ENST00000355155 API5Q9BZZ5 524 aaKnown RBP21.98■■□□□ 1.11
VPS13B-201ENST00000355155 CHMP4BQ9H444 224 aaKnown RBP21.98■■□□□ 1.11
VPS13B-201ENST00000355155 PTPRCP08575 1304 aa21.98■■□□□ 1.11
VPS13B-201ENST00000355155 COL5A2P05997 1499 aaPredicted RBP21.98■■□□□ 1.11
VPS13B-201ENST00000355155 COL14A1Q05707 1796 aaKnown RBP21.98■■□□□ 1.11
VPS13B-201ENST00000355155 HOXB7P09629 217 aa21.98■■□□□ 1.11
VPS13B-201ENST00000355155 FTSJ3Q8IY81 847 aaKnown RBP21.98■■□□□ 1.11
VPS13B-201ENST00000355155 TSPYL4Q9UJ04 414 aa21.98■■□□□ 1.11
VPS13B-201ENST00000355155 MEGF6O75095 1541 aa21.96■■□□□ 1.11
VPS13B-201ENST00000355155 ZC3H6P61129 1189 aaKnown RBP21.96■■□□□ 1.11
VPS13B-201ENST00000355155 HEG1Q9ULI3 1381 aa21.96■■□□□ 1.11
VPS13B-201ENST00000355155 ZBTB40Q9NUA8 1239 aa21.96■■□□□ 1.11
VPS13B-201ENST00000355155 SHANK3Q9BYB0 1731 aa21.95■■□□□ 1.1
VPS13B-201ENST00000355155 PLCH1Q4KWH8 1693 aa21.95■■□□□ 1.1
VPS13B-201ENST00000355155 TMEM57Q8N5G2 664 aa21.95■■□□□ 1.1
VPS13B-201ENST00000355155 HDAC1Q13547 482 aaPredicted RBP21.94■■□□□ 1.1
VPS13B-201ENST00000355155 PXDNLA1KZ92 1463 aa21.94■■□□□ 1.1
VPS13B-201ENST00000355155 RNMTO43148 476 aaKnown RBP21.93■■□□□ 1.1
VPS13B-201ENST00000355155 COL16A1Q07092 1604 aaPredicted RBP21.93■■□□□ 1.1
VPS13B-201ENST00000355155 PCDHB15Q9Y5E8 787 aa21.93■■□□□ 1.1
VPS13B-201ENST00000355155 IGHDP01880 384 aa21.93■■□□□ 1.1
VPS13B-201ENST00000355155 INTS3Q68E01 1043 aaKnown RBP21.93■■□□□ 1.1
VPS13B-201ENST00000355155 ZNF530Q6P9A1 599 aaPredicted RBP21.93■■□□□ 1.1
VPS13B-201ENST00000355155 WDR17Q8IZU2 1322 aa21.92■■□□□ 1.1
VPS13B-201ENST00000355155 CHMP4AQ9BY43 222 aa21.92■■□□□ 1.1
VPS13B-201ENST00000355155 CABLES1Q8TDN4 633 aa21.91■■□□□ 1.1
VPS13B-201ENST00000355155 ZBTB7BO15156 539 aaPredicted RBP21.9■■□□□ 1.1
VPS13B-201ENST00000355155 WNK3Q9BYP7 1800 aa21.9■■□□□ 1.1
VPS13B-201ENST00000355155 PAPPAQ13219 1627 aa21.9■■□□□ 1.1
VPS13B-201ENST00000355155 KDM6AO15550 1401 aaPredicted RBP21.9■■□□□ 1.1
VPS13B-201ENST00000355155 RWDD1Q9H446 243 aaPredicted RBP21.89■■□□□ 1.09
VPS13B-201ENST00000355155 ZBTB7CA1YPR0 619 aa21.88■■□□□ 1.09
VPS13B-201ENST00000355155 TATP17735 454 aaPredicted RBP21.88■■□□□ 1.09
VPS13B-201ENST00000355155 KRT24Q2M2I5 525 aa21.88■■□□□ 1.09
VPS13B-201ENST00000355155 C1orf141Q5JVX7 400 aa21.88■■□□□ 1.09
VPS13B-201ENST00000355155 RBM19Q9Y4C8 960 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms