RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 MSL1Q68DK7 614 aa9.38□□□□□ -0.91
SCN8A-201ENST00000354534 CTNNA2P26232 953 aa9.38□□□□□ -0.91
SCN8A-201ENST00000354534 CCDC158Q5M9N0 1113 aa9.38□□□□□ -0.91
SCN8A-201ENST00000354534 TTC5Q8N0Z6 440 aa9.38□□□□□ -0.91
SCN8A-201ENST00000354534 NUP155O75694 1391 aa9.38□□□□□ -0.91
SCN8A-201ENST00000354534 NACADO15069 1562 aa9.38□□□□□ -0.91
SCN8A-201ENST00000354534 RAB3GAP2Q9H2M9 1393 aa9.38□□□□□ -0.91
SCN8A-201ENST00000354534 ZMYND15Q9H091 742 aa9.38□□□□□ -0.91
SCN8A-201ENST00000354534 KAT6BQ8WYB5 2073 aa9.38□□□□□ -0.91
SCN8A-201ENST00000354534 ANAPC4Q9UJX5 808 aa9.38□□□□□ -0.91
SCN8A-201ENST00000354534 MAP7D1Q3KQU3 841 aa9.38□□□□□ -0.91
SCN8A-201ENST00000354534 KIF18AQ8NI77 898 aa9.38□□□□□ -0.91
SCN8A-201ENST00000354534 SCLT1Q96NL6 688 aa9.38□□□□□ -0.91
SCN8A-201ENST00000354534 FAM177BA6PVY3 158 aa9.37□□□□□ -0.91
SCN8A-201ENST00000354534 HYPKQ9NX55 129 aa9.37□□□□□ -0.91
SCN8A-201ENST00000354534 SSX2IPQ9Y2D8 614 aa9.37□□□□□ -0.91
SCN8A-201ENST00000354534 SSBP05455 408 aaKnown RBP eCLIP9.37□□□□□ -0.91
SCN8A-201ENST00000354534 KIF4BQ2VIQ3 1234 aa9.37□□□□□ -0.91
SCN8A-201ENST00000354534 MAATS1Q7Z4T9 603 aa9.37□□□□□ -0.91
SCN8A-201ENST00000354534 STK3Q13188 491 aa9.37□□□□□ -0.91
SCN8A-201ENST00000354534 CCDC18Q5T9S5 1454 aa9.37□□□□□ -0.91
SCN8A-201ENST00000354534 SLC3A2P08195 630 aaKnown RBP9.37□□□□□ -0.91
SCN8A-201ENST00000354534 TEFQ10587 303 aa9.37□□□□□ -0.91
SCN8A-201ENST00000354534 DDX58O95786 925 aaKnown RBP9.37□□□□□ -0.91
SCN8A-201ENST00000354534 SEPT14Q6ZU15 432 aa9.37□□□□□ -0.91
SCN8A-201ENST00000354534 CFAP100Q494V2 611 aa9.37□□□□□ -0.91
SCN8A-201ENST00000354534 RBM28Q9NW13 759 aaKnown RBP9.37□□□□□ -0.91
SCN8A-201ENST00000354534 CARMIL2Q6F5E8 1435 aa9.37□□□□□ -0.91
SCN8A-201ENST00000354534 MICALL1Q8N3F8 863 aa9.36□□□□□ -0.91
SCN8A-201ENST00000354534 MPHOSPH10O00566 681 aaKnown RBP9.36□□□□□ -0.91
SCN8A-201ENST00000354534 DYNC1I1O14576 645 aa9.36□□□□□ -0.91
SCN8A-201ENST00000354534 CEP57L1Q8IYX8 460 aa9.36□□□□□ -0.91
SCN8A-201ENST00000354534 SMTNL1A8MU46 457 aa9.36□□□□□ -0.91
SCN8A-201ENST00000354534 CCDC96Q2M329 555 aa9.36□□□□□ -0.91
SCN8A-201ENST00000354534 SREK1Q8WXA9 508 aaKnown RBP9.36□□□□□ -0.91
SCN8A-201ENST00000354534 KIF5BP33176 963 aa9.36□□□□□ -0.91
SCN8A-201ENST00000354534 CHMP4BP1P59074 171 aa9.36□□□□□ -0.91
SCN8A-201ENST00000354534 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.36□□□□□ -0.91
SCN8A-201ENST00000354534 TTC31Q49AM3 519 aaPredicted RBP9.36□□□□□ -0.91
SCN8A-201ENST00000354534 DNAI2Q9GZS0 605 aa9.36□□□□□ -0.91
SCN8A-201ENST00000354534 MKRN1Q9UHC7 482 aaKnown RBP9.36□□□□□ -0.91
SCN8A-201ENST00000354534 UPF3BQ9BZI7 483 aaKnown RBP9.36□□□□□ -0.91
SCN8A-201ENST00000354534 ESPNB1AK53 854 aa9.36□□□□□ -0.91
SCN8A-201ENST00000354534 FAM114A2Q9NRY5 505 aa9.36□□□□□ -0.91
SCN8A-201ENST00000354534 NEK4P51957 841 aa9.35□□□□□ -0.91
SCN8A-201ENST00000354534 PAFAH1B1P43034 410 aa9.35□□□□□ -0.91
SCN8A-201ENST00000354534 PPP1R12BO60237 982 aaPredicted RBP9.35□□□□□ -0.91
SCN8A-201ENST00000354534 AIMP1Q12904 312 aaKnown RBP9.35□□□□□ -0.91
SCN8A-201ENST00000354534 IKBKGQ9Y6K9 419 aa9.35□□□□□ -0.91
SCN8A-201ENST00000354534 EPSTI1Q96J88 318 aa9.35□□□□□ -0.91
SCN8A-201ENST00000354534 BMP2KQ9NSY1 1161 aaPredicted RBP9.35□□□□□ -0.91
SCN8A-201ENST00000354534 HSF2BPO75031 334 aa9.35□□□□□ -0.91
SCN8A-201ENST00000354534 CACNA2D4Q7Z3S7 1137 aa9.35□□□□□ -0.91
SCN8A-201ENST00000354534 ZSCAN12O43309 604 aa9.34□□□□□ -0.91
SCN8A-201ENST00000354534 CEP112Q8N8E3 955 aa9.34□□□□□ -0.91
SCN8A-201ENST00000354534 PRR16Q569H4 304 aa9.34□□□□□ -0.91
SCN8A-201ENST00000354534 ANKS4BQ8N8V4 417 aa9.34□□□□□ -0.91
SCN8A-201ENST00000354534 PRPF4BQ13523 1007 aaKnown RBP9.34□□□□□ -0.91
SCN8A-201ENST00000354534 FKBP5Q13451 457 aaPredicted RBP9.34□□□□□ -0.91
SCN8A-201ENST00000354534 CEP135Q66GS9 1140 aa9.34□□□□□ -0.92
SCN8A-201ENST00000354534 NAA15Q9BXJ9 866 aaKnown RBP9.33□□□□□ -0.92
SCN8A-201ENST00000354534 RSPH14Q9UHP6 348 aa9.33□□□□□ -0.92
SCN8A-201ENST00000354534 KIF4AO95239 1232 aa9.33□□□□□ -0.92
SCN8A-201ENST00000354534 C10orf67Q8IYJ2 551 aa9.33□□□□□ -0.92
SCN8A-201ENST00000354534 CCDC144AA2RUR9 1427 aa9.33□□□□□ -0.92
SCN8A-201ENST00000354534 MCM2P49736 904 aa9.33□□□□□ -0.92
SCN8A-201ENST00000354534 SMC6Q96SB8 1091 aa9.33□□□□□ -0.92
SCN8A-201ENST00000354534 API5Q9BZZ5 524 aaKnown RBP9.33□□□□□ -0.92
SCN8A-201ENST00000354534 ZBTB16Q05516 673 aa9.33□□□□□ -0.92
SCN8A-201ENST00000354534 RSRC1Q96IZ7 334 aaKnown RBP9.33□□□□□ -0.92
SCN8A-201ENST00000354534 FSD1Q9BTV5 496 aa9.33□□□□□ -0.92
SCN8A-201ENST00000354534 TBC1D2BQ9UPU7 963 aa9.33□□□□□ -0.92
SCN8A-201ENST00000354534 CCDC69A6NI79 296 aa9.33□□□□□ -0.92
SCN8A-201ENST00000354534 KRT85P78386 507 aa9.33□□□□□ -0.92
SCN8A-201ENST00000354534 SH3BP5O60239 455 aa9.33□□□□□ -0.92
SCN8A-201ENST00000354534 TACC1O75410 805 aa9.33□□□□□ -0.92
SCN8A-201ENST00000354534 CDC45O75419 566 aa9.33□□□□□ -0.92
SCN8A-201ENST00000354534 ODF2LQ9ULJ1 636 aa9.33□□□□□ -0.92
SCN8A-201ENST00000354534 CARMIL1Q5VZK9 1371 aa9.32□□□□□ -0.92
SCN8A-201ENST00000354534 KIF2AO00139 706 aaPredicted RBP9.32□□□□□ -0.92
SCN8A-201ENST00000354534 ZNF853P0CG23 659 aa9.32□□□□□ -0.92
SCN8A-201ENST00000354534 SMC1BQ8NDV3 1235 aa9.32□□□□□ -0.92
SCN8A-201ENST00000354534 FERMT2Q96AC1 680 aa9.32□□□□□ -0.92
SCN8A-201ENST00000354534 NSRP1Q9H0G5 558 aaKnown RBP9.32□□□□□ -0.92
SCN8A-201ENST00000354534 USO1O60763 962 aaKnown RBP9.32□□□□□ -0.92
SCN8A-201ENST00000354534 DIXDC1Q155Q3 683 aa9.32□□□□□ -0.92
SCN8A-201ENST00000354534 DDX27Q96GQ7 796 aaKnown RBP9.32□□□□□ -0.92
SCN8A-201ENST00000354534 CUX2O14529 1486 aa9.32□□□□□ -0.92
SCN8A-201ENST00000354534 ZNF76P36508 570 aa9.32□□□□□ -0.92
SCN8A-201ENST00000354534 GBP6Q6ZN66 633 aa9.32□□□□□ -0.92
SCN8A-201ENST00000354534 TRMT1Q9NXH9 659 aaKnown RBP9.32□□□□□ -0.92
SCN8A-201ENST00000354534 MPHOSPH9Q99550 1183 aa9.32□□□□□ -0.92
SCN8A-201ENST00000354534 SLU7O95391 586 aaKnown RBP9.32□□□□□ -0.92
SCN8A-201ENST00000354534 TRIM22Q8IYM9 498 aa9.32□□□□□ -0.92
SCN8A-201ENST00000354534 NUP62CLQ9H1M0 184 aa9.32□□□□□ -0.92
SCN8A-201ENST00000354534 VPS36Q86VN1 386 aa9.32□□□□□ -0.92
SCN8A-201ENST00000354534 DCAF8L1A6NGE4 600 aa9.32□□□□□ -0.92
SCN8A-201ENST00000354534 IVLP07476 585 aa9.31□□□□□ -0.92
SCN8A-201ENST00000354534 RIC3Q7Z5B4 369 aa9.31□□□□□ -0.92
SCN8A-201ENST00000354534 RNF168Q8IYW5 571 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 131.8 ms