RNA–Protein interactions for RNA: ENST00000354513.9

PDGFA-201, Transcript of platelet derived growth factor subunit A, humanhuman

TSL 1 (best) BASIC

Gene PDGFA, Length 1,308 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-201ENST00000354513 TAF1LQ8IZX4 1826 aa22.29■■□□□ 1.16
PDGFA-201ENST00000354513 MAP2P11137 1827 aaKnown RBP22.28■■□□□ 1.16
PDGFA-201ENST00000354513 SLC24A1O60721 1099 aa22.28■■□□□ 1.16
PDGFA-201ENST00000354513 C5P01031 1676 aa22.27■■□□□ 1.16
PDGFA-201ENST00000354513 AMPHP49418 695 aa22.27■■□□□ 1.16
PDGFA-201ENST00000354513 DDX54Q8TDD1 881 aaKnown RBP22.27■■□□□ 1.16
PDGFA-201ENST00000354513 NBPF6Q5VWK0 638 aa22.25■■□□□ 1.15
PDGFA-201ENST00000354513 NBPF4Q96M43 638 aa22.25■■□□□ 1.15
PDGFA-201ENST00000354513 MTFR1LQ9H019 292 aa22.25■■□□□ 1.15
PDGFA-201ENST00000354513 USHBP1Q8N6Y0 703 aa22.24■■□□□ 1.15
PDGFA-201ENST00000354513 AKT1S1Q96B36 256 aa22.24■■□□□ 1.15
PDGFA-201ENST00000354513 CARD14Q9BXL6 1004 aa22.24■■□□□ 1.15
PDGFA-201ENST00000354513 CHD4Q14839 1912 aa22.24■■□□□ 1.15
PDGFA-201ENST00000354513 NSD3Q9BZ95 1437 aa22.23■■□□□ 1.15
PDGFA-201ENST00000354513 INSRP06213 1382 aa22.23■■□□□ 1.15
PDGFA-201ENST00000354513 NCAPD2Q15021 1401 aa22.22■■□□□ 1.15
PDGFA-201ENST00000354513 YY1P25490 414 aa22.21■■□□□ 1.15
PDGFA-201ENST00000354513 ZCRB1Q8TBF4 217 aaKnown RBP22.21■■□□□ 1.15
PDGFA-201ENST00000354513 FLT4P35916 1363 aa22.21■■□□□ 1.15
PDGFA-201ENST00000354513 PRIM1P49642 420 aaKnown RBP22.2■■□□□ 1.14
PDGFA-201ENST00000354513 KCNQ4P56696 695 aa22.2■■□□□ 1.14
PDGFA-201ENST00000354513 HSP90AB2PQ58FF8 381 aa22.2■■□□□ 1.14
PDGFA-201ENST00000354513 FHDC1Q9C0D6 1143 aaPredicted RBP22.2■■□□□ 1.14
PDGFA-201ENST00000354513 SMG6Q86US8 1419 aaKnown RBP22.2■■□□□ 1.14
PDGFA-201ENST00000354513 KIF24Q5T7B8 1368 aa22.19■■□□□ 1.14
PDGFA-201ENST00000354513 PNPLA7Q6ZV29 1317 aa22.19■■□□□ 1.14
PDGFA-201ENST00000354513 UTRNP46939 3433 aa22.18■■□□□ 1.14
PDGFA-201ENST00000354513 SLC27A3Q5K4L6 730 aa22.18■■□□□ 1.14
PDGFA-201ENST00000354513 MAP3K5Q99683 1374 aa22.17■■□□□ 1.14
PDGFA-201ENST00000354513 SYT17Q9BSW7 474 aa22.17■■□□□ 1.14
PDGFA-201ENST00000354513 SYTL4Q96C24 671 aaPredicted RBP22.16■■□□□ 1.14
PDGFA-201ENST00000354513 CDCA8Q53HL2 280 aa22.15■■□□□ 1.14
PDGFA-201ENST00000354513 EMILIN1Q9Y6C2 1016 aa22.15■■□□□ 1.14
PDGFA-201ENST00000354513 CGNL1Q0VF96 1302 aa22.15■■□□□ 1.14
PDGFA-201ENST00000354513 UBR3Q6ZT12 1888 aa22.14■■□□□ 1.14
PDGFA-201ENST00000354513 ARXQ96QS3 562 aa22.13■■□□□ 1.13
PDGFA-201ENST00000354513 C4BP0C0L5 1744 aa22.13■■□□□ 1.13
PDGFA-201ENST00000354513 RAPGEF4Q8WZA2 1011 aa22.11■■□□□ 1.13
PDGFA-201ENST00000354513 TIMELESSQ9UNS1 1208 aa22.11■■□□□ 1.13
PDGFA-201ENST00000354513 TATP17735 454 aaPredicted RBP22.1■■□□□ 1.13
PDGFA-201ENST00000354513 CLSPNQ9HAW4 1339 aa22.1■■□□□ 1.13
PDGFA-201ENST00000354513 CYP27B1O15528 508 aa22.09■■□□□ 1.13
PDGFA-201ENST00000354513 PCDH11XQ9BZA7 1347 aa22.09■■□□□ 1.13
PDGFA-201ENST00000354513 PCDH11YQ9BZA8 1340 aa22.09■■□□□ 1.13
PDGFA-201ENST00000354513 SLC16A10Q8TF71 515 aa22.08■■□□□ 1.13
PDGFA-201ENST00000354513 CCNL1Q9UK58 526 aaPredicted RBP22.08■■□□□ 1.13
PDGFA-201ENST00000354513 DCAF8L1A6NGE4 600 aa22.07■■□□□ 1.12
PDGFA-201ENST00000354513 TFCP2L1Q9NZI6 479 aa22.06■■□□□ 1.12
PDGFA-201ENST00000354513 PALLDQ8WX93 1383 aa22.05■■□□□ 1.12
PDGFA-201ENST00000354513 WASHC2AQ641Q2 1341 aa22.05■■□□□ 1.12
PDGFA-201ENST00000354513 COL23A1Q86Y22 540 aaPredicted RBP22.04■■□□□ 1.12
PDGFA-201ENST00000354513 GOLGB1Q14789 3259 aaKnown RBP22.03■■□□□ 1.12
PDGFA-201ENST00000354513 PCGF6Q9BYE7 350 aa22.03■■□□□ 1.12
PDGFA-201ENST00000354513 POLKQ9UBT6 870 aa22.03■■□□□ 1.12
PDGFA-201ENST00000354513 EYA1Q99502 592 aa22.02■■□□□ 1.12
PDGFA-201ENST00000354513 COL5A3P25940 1745 aaPredicted RBP22.01■■□□□ 1.11
PDGFA-201ENST00000354513 PPM1GO15355 546 aaPredicted RBP22■■□□□ 1.11
PDGFA-201ENST00000354513 NKX1-1Q15270 411 aaPredicted RBP22■■□□□ 1.11
PDGFA-201ENST00000354513 MPRIPQ6WCQ1 1025 aa22■■□□□ 1.11
PDGFA-201ENST00000354513 AMIGO3Q86WK7 504 aa22■■□□□ 1.11
PDGFA-201ENST00000354513 NLGN2Q8NFZ4 835 aa22■■□□□ 1.11
PDGFA-201ENST00000354513 ZNF831Q5JPB2 1677 aa22■■□□□ 1.11
PDGFA-201ENST00000354513 POLD1P28340 1107 aa21.98■■□□□ 1.11
PDGFA-201ENST00000354513 ZNF784Q8NCA9 323 aaPredicted RBP21.98■■□□□ 1.11
PDGFA-201ENST00000354513 VIRMAQ69YN4 1812 aaKnown RBP21.98■■□□□ 1.11
PDGFA-201ENST00000354513 HSPA5P11021 654 aaKnown RBP21.97■■□□□ 1.11
PDGFA-201ENST00000354513 PIGBQ92521 554 aa21.97■■□□□ 1.11
PDGFA-201ENST00000354513 EIF4A2Q14240 407 aaKnown RBP21.96■■□□□ 1.11
PDGFA-201ENST00000354513 KLHL34Q8N239 644 aa21.96■■□□□ 1.11
PDGFA-201ENST00000354513 MSL1Q68DK7 614 aa21.95■■□□□ 1.1
PDGFA-201ENST00000354513 POLR3GLQ9BT43 218 aa21.95■■□□□ 1.1
PDGFA-201ENST00000354513 KIAA1551Q9HCM1 1747 aa21.95■■□□□ 1.1
PDGFA-201ENST00000354513 PHKG2P15735 406 aa21.93■■□□□ 1.1
PDGFA-201ENST00000354513 SMIM5Q71RC9 77 aa21.93■■□□□ 1.1
PDGFA-201ENST00000354513 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.93■■□□□ 1.1
PDGFA-201ENST00000354513 SPG7Q9UQ90 795 aa21.93■■□□□ 1.1
PDGFA-201ENST00000354513 C4AP0C0L4 1744 aa21.93■■□□□ 1.1
PDGFA-201ENST00000354513 IGSF1Q8N6C5 1336 aa21.93■■□□□ 1.1
PDGFA-201ENST00000354513 PLEKHG2Q9H7P9 1386 aa21.92■■□□□ 1.1
PDGFA-201ENST00000354513 KIF13BQ9NQT8 1826 aa21.92■■□□□ 1.1
PDGFA-201ENST00000354513 TNNT2P45379 298 aaPredicted RBP21.92■■□□□ 1.1
PDGFA-201ENST00000354513 EIF4G2P78344 907 aaKnown RBP eCLIP21.92■■□□□ 1.1
PDGFA-201ENST00000354513 SCN11AQ9UI33 1791 aa21.92■■□□□ 1.1
PDGFA-201ENST00000354513 MSH5O43196 834 aa21.91■■□□□ 1.1
PDGFA-201ENST00000354513 SMARCC1Q92922 1105 aaPredicted RBP21.91■■□□□ 1.1
PDGFA-201ENST00000354513 PANK3Q9H999 370 aa21.91■■□□□ 1.1
PDGFA-201ENST00000354513 KDRP35968 1356 aa21.91■■□□□ 1.1
PDGFA-201ENST00000354513 CICQ96RK0 1608 aaPredicted RBP21.9■■□□□ 1.1
PDGFA-201ENST00000354513 YBX3P16989 372 aaKnown RBP eCLIP21.9■■□□□ 1.1
PDGFA-201ENST00000354513 GPR162Q16538 588 aa21.9■■□□□ 1.1
PDGFA-201ENST00000354513 LINC00116Q8NCU8 138 aa21.9■■□□□ 1.1
PDGFA-201ENST00000354513 KDM6AO15550 1401 aaPredicted RBP21.89■■□□□ 1.1
PDGFA-201ENST00000354513 TJP1Q07157 1748 aa21.89■■□□□ 1.1
PDGFA-201ENST00000354513 MYH14Q7Z406 1995 aaKnown RBP21.89■■□□□ 1.1
PDGFA-201ENST00000354513 ITPK1Q13572 414 aa21.88■■□□□ 1.09
PDGFA-201ENST00000354513 ASAP1Q9ULH1 1129 aa21.88■■□□□ 1.09
PDGFA-201ENST00000354513 LOC102724428A0A0B4J2F2 783 aa21.87■■□□□ 1.09
PDGFA-201ENST00000354513 SIK1P57059 783 aa21.87■■□□□ 1.09
PDGFA-201ENST00000354513 IFNL2Q8IZJ0 200 aa21.87■■□□□ 1.09
PDGFA-201ENST00000354513 AK7Q96M32 723 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms