RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 NBPF4Q96M43 638 aa15.8■□□□□ 0.12
CDRT1-202ENST00000354433 ZCRB1Q8TBF4 217 aaKnown RBP15.79■□□□□ 0.12
CDRT1-202ENST00000354433 TNNT2P45379 298 aaPredicted RBP15.79■□□□□ 0.12
CDRT1-202ENST00000354433 STK32BQ9NY57 414 aa15.79■□□□□ 0.12
CDRT1-202ENST00000354433 RGPD2P0DJD1 1756 aa15.78■□□□□ 0.12
CDRT1-202ENST00000354433 TATP17735 454 aaPredicted RBP15.78■□□□□ 0.12
CDRT1-202ENST00000354433 PROM2Q8N271 834 aa15.78■□□□□ 0.12
CDRT1-202ENST00000354433 PANK3Q9H999 370 aa15.77■□□□□ 0.11
CDRT1-202ENST00000354433 PPP1R1BQ9UD71 204 aaPredicted RBP15.77■□□□□ 0.11
CDRT1-202ENST00000354433 SPON1Q9HCB6 807 aa15.76■□□□□ 0.11
CDRT1-202ENST00000354433 BTAF1O14981 1849 aa15.75■□□□□ 0.11
CDRT1-202ENST00000354433 PCDH11XQ9BZA7 1347 aa15.74■□□□□ 0.11
CDRT1-202ENST00000354433 PCDH11YQ9BZA8 1340 aa15.74■□□□□ 0.11
CDRT1-202ENST00000354433 PRIM1P49642 420 aaKnown RBP15.74■□□□□ 0.11
CDRT1-202ENST00000354433 SLC15A2Q16348 729 aa15.74■□□□□ 0.11
CDRT1-202ENST00000354433 DOT1LQ8TEK3 1739 aa15.74■□□□□ 0.11
CDRT1-202ENST00000354433 ZBTB7AO95365 584 aa15.72■□□□□ 0.11
CDRT1-202ENST00000354433 POLKQ9UBT6 870 aa15.72■□□□□ 0.11
CDRT1-202ENST00000354433 WASHC2AQ641Q2 1341 aa15.72■□□□□ 0.11
CDRT1-202ENST00000354433 NSD2O96028 1365 aa15.72■□□□□ 0.11
CDRT1-202ENST00000354433 SHANK3Q9BYB0 1731 aa15.72■□□□□ 0.11
CDRT1-202ENST00000354433 KAT6BQ8WYB5 2073 aa15.72■□□□□ 0.11
CDRT1-202ENST00000354433 PDGFDQ9GZP0 370 aaPredicted RBP15.71■□□□□ 0.11
CDRT1-202ENST00000354433 KNSTRNQ9Y448 316 aa15.71■□□□□ 0.11
CDRT1-202ENST00000354433 ANKRD26Q9UPS8 1709 aa15.71■□□□□ 0.11
CDRT1-202ENST00000354433 MORC1Q86VD1 984 aa15.7■□□□□ 0.1
CDRT1-202ENST00000354433 KIF7Q2M1P5 1343 aa15.69■□□□□ 0.1
CDRT1-202ENST00000354433 SLC27A3Q5K4L6 730 aa15.69■□□□□ 0.1
CDRT1-202ENST00000354433 CASZ1Q86V15 1759 aa15.69■□□□□ 0.1
CDRT1-202ENST00000354433 EYA1Q99502 592 aa15.69■□□□□ 0.1
CDRT1-202ENST00000354433 LRRC4BQ9NT99 713 aa15.69■□□□□ 0.1
CDRT1-202ENST00000354433 PAPPAQ13219 1627 aa15.68■□□□□ 0.1
CDRT1-202ENST00000354433 ATF5Q9Y2D1 282 aaPredicted RBP15.68■□□□□ 0.1
CDRT1-202ENST00000354433 KCNQ4P56696 695 aa15.67■□□□□ 0.1
CDRT1-202ENST00000354433 EIF4A2Q14240 407 aaKnown RBP15.67■□□□□ 0.1
CDRT1-202ENST00000354433 ZNF827Q17R98 1081 aa15.67■□□□□ 0.1
CDRT1-202ENST00000354433 SPG7Q9UQ90 795 aa15.67■□□□□ 0.1
CDRT1-202ENST00000354433 MAP2P11137 1827 aaKnown RBP15.67■□□□□ 0.1
CDRT1-202ENST00000354433 CYP27B1O15528 508 aa15.66■□□□□ 0.1
CDRT1-202ENST00000354433 MPRIPQ6WCQ1 1025 aa15.66■□□□□ 0.1
CDRT1-202ENST00000354433 MIER1Q8N108 512 aa15.66■□□□□ 0.1
CDRT1-202ENST00000354433 CCNL1Q9UK58 526 aaPredicted RBP15.66■□□□□ 0.1
CDRT1-202ENST00000354433 NCAPD2Q15021 1401 aa15.66■□□□□ 0.1
CDRT1-202ENST00000354433 MTFR1LQ9H019 292 aa15.66■□□□□ 0.1
CDRT1-202ENST00000354433 TFCP2L1Q9NZI6 479 aa15.65■□□□□ 0.1
CDRT1-202ENST00000354433 PKD1L3Q7Z443 1732 aa15.64■□□□□ 0.09
CDRT1-202ENST00000354433 PALLDQ8WX93 1383 aa15.63■□□□□ 0.09
CDRT1-202ENST00000354433 DDX10Q13206 875 aaKnown RBP15.62■□□□□ 0.09
CDRT1-202ENST00000354433 AKT1S1Q96B36 256 aa15.62■□□□□ 0.09
CDRT1-202ENST00000354433 IGSF1Q8N6C5 1336 aa15.62■□□□□ 0.09
CDRT1-202ENST00000354433 DCAF8L1A6NGE4 600 aa15.62■□□□□ 0.09
CDRT1-202ENST00000354433 CNGB1Q14028 1251 aaPredicted RBP15.62■□□□□ 0.09
CDRT1-202ENST00000354433 IFNL2Q8IZJ0 200 aa15.62■□□□□ 0.09
CDRT1-202ENST00000354433 PTGER2P43116 358 aa15.61■□□□□ 0.09
CDRT1-202ENST00000354433 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.61■□□□□ 0.09
CDRT1-202ENST00000354433 LY75O60449 1722 aa15.6■□□□□ 0.09
CDRT1-202ENST00000354433 TOGARAM1Q9Y4F4 1720 aa15.6■□□□□ 0.09
CDRT1-202ENST00000354433 MSH5O43196 834 aa15.6■□□□□ 0.09
CDRT1-202ENST00000354433 PHKG2P15735 406 aa15.6■□□□□ 0.09
CDRT1-202ENST00000354433 AMER1Q5JTC6 1135 aaPredicted RBP15.6■□□□□ 0.09
CDRT1-202ENST00000354433 TMOD3Q9NYL9 352 aa15.6■□□□□ 0.09
CDRT1-202ENST00000354433 PNPLA7Q6ZV29 1317 aa15.6■□□□□ 0.09
CDRT1-202ENST00000354433 CC2D1BQ5T0F9 858 aaKnown RBP15.59■□□□□ 0.09
CDRT1-202ENST00000354433 SMARCC1Q92922 1105 aaPredicted RBP15.59■□□□□ 0.09
CDRT1-202ENST00000354433 KLHL34Q8N239 644 aa15.58■□□□□ 0.09
CDRT1-202ENST00000354433 POLD1P28340 1107 aa15.58■□□□□ 0.08
CDRT1-202ENST00000354433 NKX1-1Q15270 411 aaPredicted RBP15.58■□□□□ 0.08
CDRT1-202ENST00000354433 PIGBQ92521 554 aa15.58■□□□□ 0.08
CDRT1-202ENST00000354433 PLEKHG2Q9H7P9 1386 aa15.57■□□□□ 0.08
CDRT1-202ENST00000354433 PLEKHO1Q53GL0 409 aaPredicted RBP15.57■□□□□ 0.08
CDRT1-202ENST00000354433 AEBP1Q8IUX7 1158 aa15.57■□□□□ 0.08
CDRT1-202ENST00000354433 SLC16A10Q8TF71 515 aa15.57■□□□□ 0.08
CDRT1-202ENST00000354433 ARXQ96QS3 562 aa15.57■□□□□ 0.08
CDRT1-202ENST00000354433 FHDC1Q9C0D6 1143 aaPredicted RBP15.57■□□□□ 0.08
CDRT1-202ENST00000354433 HMGB2P26583 209 aaKnown RBP15.56■□□□□ 0.08
CDRT1-202ENST00000354433 SULT6B1Q6IMI4 303 aa15.56■□□□□ 0.08
CDRT1-202ENST00000354433 ZNF530Q6P9A1 599 aaPredicted RBP15.56■□□□□ 0.08
CDRT1-202ENST00000354433 C5P01031 1676 aa15.55■□□□□ 0.08
CDRT1-202ENST00000354433 HSP90AB1P08238 724 aaKnown RBP15.55■□□□□ 0.08
CDRT1-202ENST00000354433 AMOTQ4VCS5 1084 aa15.55■□□□□ 0.08
CDRT1-202ENST00000354433 AK7Q96M32 723 aa15.55■□□□□ 0.08
CDRT1-202ENST00000354433 SGIP1Q9BQI5 828 aa15.55■□□□□ 0.08
CDRT1-202ENST00000354433 MTHFSP49914 203 aa15.54■□□□□ 0.08
CDRT1-202ENST00000354433 C1orf141Q5JVX7 400 aa15.54■□□□□ 0.08
CDRT1-202ENST00000354433 SYT17Q9BSW7 474 aa15.54■□□□□ 0.08
CDRT1-202ENST00000354433 ITGB4P16144 1822 aa15.54■□□□□ 0.08
CDRT1-202ENST00000354433 QSER1Q2KHR3 1735 aa15.54■□□□□ 0.08
CDRT1-202ENST00000354433 TUBGCP6Q96RT7 1819 aa15.54■□□□□ 0.08
CDRT1-202ENST00000354433 PER1O15534 1290 aaPredicted RBP15.53■□□□□ 0.08
CDRT1-202ENST00000354433 LOC102724428A0A0B4J2F2 783 aa15.53■□□□□ 0.08
CDRT1-202ENST00000354433 IL13P35225 146 aa15.53■□□□□ 0.08
CDRT1-202ENST00000354433 SIK1P57059 783 aa15.53■□□□□ 0.08
CDRT1-202ENST00000354433 COL23A1Q86Y22 540 aaPredicted RBP15.53■□□□□ 0.08
CDRT1-202ENST00000354433 DCAF5Q96JK2 942 aa15.53■□□□□ 0.08
CDRT1-202ENST00000354433 ASAP1Q9ULH1 1129 aa15.53■□□□□ 0.08
CDRT1-202ENST00000354433 PHF14O94880 888 aa15.52■□□□□ 0.07
CDRT1-202ENST00000354433 MSL1Q68DK7 614 aa15.52■□□□□ 0.07
CDRT1-202ENST00000354433 ATP6V1AP38606 617 aa15.51■□□□□ 0.07
CDRT1-202ENST00000354433 CABP4P57796 275 aa15.51■□□□□ 0.07
CDRT1-202ENST00000354433 KDRP35968 1356 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms