RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 CFAP44Q96MT7 982 aa26.58■■□□□ 1.85
TRIM4-202ENST00000354241 GNAT3A8MTJ3 354 aa26.57■■□□□ 1.84
TRIM4-202ENST00000354241 MAP3K5Q99683 1374 aa26.56■■□□□ 1.84
TRIM4-202ENST00000354241 CT47B1P0C2W7 299 aaPredicted RBP26.56■■□□□ 1.84
TRIM4-202ENST00000354241 RARSP54136 660 aaKnown RBP26.56■■□□□ 1.84
TRIM4-202ENST00000354241 MBIPQ9NS73 344 aa26.56■■□□□ 1.84
TRIM4-202ENST00000354241 HTATSF1O43719 755 aaKnown RBP26.55■■□□□ 1.84
TRIM4-202ENST00000354241 COL22A1Q8NFW1 1626 aaPredicted RBP26.55■■□□□ 1.84
TRIM4-202ENST00000354241 PLEKHO1Q53GL0 409 aaPredicted RBP26.54■■□□□ 1.84
TRIM4-202ENST00000354241 COL16A1Q07092 1604 aaPredicted RBP26.53■■□□□ 1.84
TRIM4-202ENST00000354241 PPP4R2Q9NY27 417 aa26.53■■□□□ 1.84
TRIM4-202ENST00000354241 CRB1P82279 1406 aa26.53■■□□□ 1.84
TRIM4-202ENST00000354241 UBAP1LF5GYI3 381 aa26.53■■□□□ 1.84
TRIM4-202ENST00000354241 AMOTQ4VCS5 1084 aa26.52■■□□□ 1.84
TRIM4-202ENST00000354241 LRRC37A3O60309 1634 aa26.52■■□□□ 1.84
TRIM4-202ENST00000354241 BCL2L13Q9BXK5 485 aa26.51■■□□□ 1.83
TRIM4-202ENST00000354241 ZNF530Q6P9A1 599 aaPredicted RBP26.5■■□□□ 1.83
TRIM4-202ENST00000354241 RAPGEF4Q8WZA2 1011 aa26.5■■□□□ 1.83
TRIM4-202ENST00000354241 COL5A2P05997 1499 aaPredicted RBP26.5■■□□□ 1.83
TRIM4-202ENST00000354241 C20orf194Q5TEA3 1177 aa26.49■■□□□ 1.83
TRIM4-202ENST00000354241 CANXP27824 592 aaKnown RBP26.49■■□□□ 1.83
TRIM4-202ENST00000354241 EXOC6Q8TAG9 804 aa26.49■■□□□ 1.83
TRIM4-202ENST00000354241 WDR17Q8IZU2 1322 aa26.48■■□□□ 1.83
TRIM4-202ENST00000354241 CHL1O00533 1208 aa26.48■■□□□ 1.83
TRIM4-202ENST00000354241 TATP17735 454 aaPredicted RBP26.47■■□□□ 1.83
TRIM4-202ENST00000354241 AKAP4Q5JQC9 854 aa26.47■■□□□ 1.83
TRIM4-202ENST00000354241 IL17REQ8NFR9 667 aa26.47■■□□□ 1.83
TRIM4-202ENST00000354241 FRAT1Q92837 279 aaPredicted RBP26.47■■□□□ 1.83
TRIM4-202ENST00000354241 C1orf141Q5JVX7 400 aa26.46■■□□□ 1.83
TRIM4-202ENST00000354241 TOM1L2Q6ZVM7 507 aa26.46■■□□□ 1.83
TRIM4-202ENST00000354241 CRBNQ96SW2 442 aa26.46■■□□□ 1.83
TRIM4-202ENST00000354241 VIRMAQ69YN4 1812 aaKnown RBP26.46■■□□□ 1.83
TRIM4-202ENST00000354241 SMC4Q9NTJ3 1288 aa26.45■■□□□ 1.83
TRIM4-202ENST00000354241 MEGF6O75095 1541 aa26.45■■□□□ 1.83
TRIM4-202ENST00000354241 STRN4Q9NRL3 753 aa26.45■■□□□ 1.82
TRIM4-202ENST00000354241 COL14A1Q05707 1796 aaKnown RBP26.44■■□□□ 1.82
TRIM4-202ENST00000354241 ELL2O00472 640 aaPredicted RBP26.44■■□□□ 1.82
TRIM4-202ENST00000354241 EVA1CP58658 441 aa26.44■■□□□ 1.82
TRIM4-202ENST00000354241 TSPYL6Q8N831 410 aa26.44■■□□□ 1.82
TRIM4-202ENST00000354241 MIS18AQ9NYP9 233 aa26.44■■□□□ 1.82
TRIM4-202ENST00000354241 SSH1Q8WYL5 1049 aa26.43■■□□□ 1.82
TRIM4-202ENST00000354241 TSPYL4Q9UJ04 414 aa26.43■■□□□ 1.82
TRIM4-202ENST00000354241 TWISTNBQ3B726 338 aaPredicted RBP26.43■■□□□ 1.82
TRIM4-202ENST00000354241 C8orf58Q8NAV2 365 aa26.43■■□□□ 1.82
TRIM4-202ENST00000354241 VAMP4O75379 141 aa26.42■■□□□ 1.82
TRIM4-202ENST00000354241 B4GALNT3Q6L9W6 998 aa26.41■■□□□ 1.82
TRIM4-202ENST00000354241 ZNF428Q96B54 188 aa26.41■■□□□ 1.82
TRIM4-202ENST00000354241 LGR6Q9HBX8 967 aa26.41■■□□□ 1.82
TRIM4-202ENST00000354241 CEMIPQ8WUJ3 1361 aa26.4■■□□□ 1.82
TRIM4-202ENST00000354241 ALDH1L2Q3SY69 923 aa26.4■■□□□ 1.82
TRIM4-202ENST00000354241 MPRIPQ6WCQ1 1025 aa26.4■■□□□ 1.82
TRIM4-202ENST00000354241 CERKQ8TCT0 537 aa26.4■■□□□ 1.82
TRIM4-202ENST00000354241 BTG4Q9NY30 223 aa26.4■■□□□ 1.82
TRIM4-202ENST00000354241 SPG7Q9UQ90 795 aa26.4■■□□□ 1.82
TRIM4-202ENST00000354241 PARP4Q9UKK3 1724 aaKnown RBP26.4■■□□□ 1.82
TRIM4-202ENST00000354241 PKD1L3Q7Z443 1732 aa26.39■■□□□ 1.82
TRIM4-202ENST00000354241 TAF7Q15545 349 aaPredicted RBP26.39■■□□□ 1.81
TRIM4-202ENST00000354241 LARP1Q6PKG0 1096 aaKnown RBP26.39■■□□□ 1.81
TRIM4-202ENST00000354241 PDE3AQ14432 1141 aa26.37■■□□□ 1.81
TRIM4-202ENST00000354241 KRT24Q2M2I5 525 aa26.37■■□□□ 1.81
TRIM4-202ENST00000354241 CARD10Q9BWT7 1032 aa26.37■■□□□ 1.81
TRIM4-202ENST00000354241 PLEKHG2Q9H7P9 1386 aa26.37■■□□□ 1.81
TRIM4-202ENST00000354241 RNMTO43148 476 aaKnown RBP26.37■■□□□ 1.81
TRIM4-202ENST00000354241 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.37■■□□□ 1.813e-9■■■■■ 35
TRIM4-202ENST00000354241 PELP1Q8IZL8 1130 aaKnown RBP26.36■■□□□ 1.81
TRIM4-202ENST00000354241 ZKSCAN2Q63HK3 967 aa26.35■■□□□ 1.81
TRIM4-202ENST00000354241 CCDC136Q96JN2 1154 aa26.35■■□□□ 1.81
TRIM4-202ENST00000354241 OVOS2A0A0G2JMS6 1433 aa26.35■■□□□ 1.81
TRIM4-202ENST00000354241 ADAMTS2O95450 1211 aa26.35■■□□□ 1.81
TRIM4-202ENST00000354241 TEFQ10587 303 aa26.35■■□□□ 1.81
TRIM4-202ENST00000354241 BABAM1Q9NWV8 329 aa26.35■■□□□ 1.81
TRIM4-202ENST00000354241 NUTM2BA6NNL0 878 aaPredicted RBP26.34■■□□□ 1.81
TRIM4-202ENST00000354241 NUTM2EB1AL46 878 aaPredicted RBP26.34■■□□□ 1.81
TRIM4-202ENST00000354241 NUTM2AQ8IVF1 878 aaPredicted RBP26.34■■□□□ 1.81
TRIM4-202ENST00000354241 PANK1Q8TE04 598 aa26.34■■□□□ 1.81
TRIM4-202ENST00000354241 KIF16BQ96L93 1317 aa26.34■■□□□ 1.81
TRIM4-202ENST00000354241 NOB1Q9ULX3 412 aaKnown RBP26.33■■□□□ 1.81
TRIM4-202ENST00000354241 TNNQ9UQP3 1299 aa26.33■■□□□ 1.81
TRIM4-202ENST00000354241 PLCH1Q4KWH8 1693 aa26.33■■□□□ 1.81
TRIM4-202ENST00000354241 TCERG1O14776 1098 aaKnown RBP26.33■■□□□ 1.81
TRIM4-202ENST00000354241 PHKG2P15735 406 aa26.33■■□□□ 1.81
TRIM4-202ENST00000354241 ADAMTS7Q9UKP4 1686 aa26.33■■□□□ 1.81
TRIM4-202ENST00000354241 IFNL2Q8IZJ0 200 aa26.32■■□□□ 1.8
TRIM4-202ENST00000354241 SCN11AQ9UI33 1791 aa26.32■■□□□ 1.8
TRIM4-202ENST00000354241 MRPL50Q8N5N7 158 aaKnown RBP26.31■■□□□ 1.8
TRIM4-202ENST00000354241 KDM3BQ7LBC6 1761 aa26.31■■□□□ 1.8
TRIM4-202ENST00000354241 IL2RBP14784 551 aa26.31■■□□□ 1.8
TRIM4-202ENST00000354241 CLUAP1Q96AJ1 413 aa26.31■■□□□ 1.8
TRIM4-202ENST00000354241 USP35Q9P2H5 1018 aa26.3■■□□□ 1.8
TRIM4-202ENST00000354241 SIPA1L3O60292 1781 aaPredicted RBP26.3■■□□□ 1.8
TRIM4-202ENST00000354241 COG6Q9Y2V7 657 aa26.29■■□□□ 1.8
TRIM4-202ENST00000354241 IPO8O15397 1037 aaKnown RBP26.29■■□□□ 1.8
TRIM4-202ENST00000354241 BRPF1P55201 1214 aaPredicted RBP26.29■■□□□ 1.8
TRIM4-202ENST00000354241 FTSJ3Q8IY81 847 aaKnown RBP26.29■■□□□ 1.8
TRIM4-202ENST00000354241 CYP27B1O15528 508 aa26.28■■□□□ 1.8
TRIM4-202ENST00000354241 MS4A1P11836 297 aa26.28■■□□□ 1.8
TRIM4-202ENST00000354241 RLBP1P12271 317 aa26.28■■□□□ 1.8
TRIM4-202ENST00000354241 ATF7IPQ6VMQ6 1270 aa26.28■■□□□ 1.8
TRIM4-202ENST00000354241 KDM6AO15550 1401 aaPredicted RBP26.28■■□□□ 1.8
TRIM4-202ENST00000354241 BTBD11A6QL63 1104 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms