RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 THUMPD2Q9BTF0 503 aaKnown RBP9.25□□□□□ -0.93
BRCA1-201ENST00000352993 TTC22Q5TAA0 569 aa9.24□□□□□ -0.93
BRCA1-201ENST00000352993 OTUD7AQ8TE49 926 aaPredicted RBP9.24□□□□□ -0.93
BRCA1-201ENST00000352993 TMX3Q96JJ7 454 aa9.24□□□□□ -0.93
BRCA1-201ENST00000352993 PLCD3Q8N3E9 789 aa9.24□□□□□ -0.93
BRCA1-201ENST00000352993 NEURL4Q96JN8 1562 aa9.24□□□□□ -0.93
BRCA1-201ENST00000352993 ERVK-7P63135 1459 aa9.23□□□□□ -0.93
BRCA1-201ENST00000352993 ABCC11Q96J66 1382 aa9.23□□□□□ -0.93
BRCA1-201ENST00000352993 SDSP20132 328 aa9.23□□□□□ -0.93
BRCA1-201ENST00000352993 ARHGAP5Q13017 1502 aa9.23□□□□□ -0.93
BRCA1-201ENST00000352993 KANK1Q14678 1352 aa9.23□□□□□ -0.93
BRCA1-201ENST00000352993 ATAD2Q6PL18 1390 aa9.23□□□□□ -0.93
BRCA1-201ENST00000352993 USP48Q86UV5 1035 aa9.23□□□□□ -0.93
BRCA1-201ENST00000352993 SIRT2Q8IXJ6 389 aa9.23□□□□□ -0.93
BRCA1-201ENST00000352993 FAM184AQ8NB25 1140 aa9.23□□□□□ -0.93
BRCA1-201ENST00000352993 ZNF592Q92610 1267 aa9.23□□□□□ -0.93
BRCA1-201ENST00000352993 KCNJ4P48050 445 aa9.23□□□□□ -0.93
BRCA1-201ENST00000352993 ALDH1L2Q3SY69 923 aa9.23□□□□□ -0.93
BRCA1-201ENST00000352993 FBXO41Q8TF61 875 aa9.23□□□□□ -0.93
BRCA1-201ENST00000352993 ERC2O15083 957 aa9.22□□□□□ -0.93
BRCA1-201ENST00000352993 MCCP23508 829 aa9.22□□□□□ -0.93
BRCA1-201ENST00000352993 SYCP2Q9BX26 1530 aa9.22□□□□□ -0.93
BRCA1-201ENST00000352993 ALKQ9UM73 1620 aa9.22□□□□□ -0.93
BRCA1-201ENST00000352993 GOLGA6L6A8MZA4 724 aa9.22□□□□□ -0.93
BRCA1-201ENST00000352993 FKBP5Q13451 457 aaPredicted RBP9.22□□□□□ -0.93
BRCA1-201ENST00000352993 CHMP3Q9Y3E7 222 aa9.22□□□□□ -0.93
BRCA1-201ENST00000352993 MROH1Q8NDA8 1641 aa9.22□□□□□ -0.93
BRCA1-201ENST00000352993 XIRP1Q702N8 1843 aaKnown RBP9.22□□□□□ -0.93
BRCA1-201ENST00000352993 ERICH4A6NGS2 130 aa9.21□□□□□ -0.93
BRCA1-201ENST00000352993 NUTM2DQ5VT03 806 aaPredicted RBP9.21□□□□□ -0.93
BRCA1-201ENST00000352993 TAF3Q5VWG9 929 aa9.21□□□□□ -0.93
BRCA1-201ENST00000352993 UPF3BQ9BZI7 483 aaKnown RBP9.21□□□□□ -0.93
BRCA1-201ENST00000352993 CABP2Q9NPB3 220 aa9.21□□□□□ -0.93
BRCA1-201ENST00000352993 ANO2Q9NQ90 1003 aa9.21□□□□□ -0.93
BRCA1-201ENST00000352993 IFT57Q9NWB7 429 aa9.21□□□□□ -0.93
BRCA1-201ENST00000352993 ATP7AQ04656 1500 aa9.21□□□□□ -0.93
BRCA1-201ENST00000352993 FIBPO43427 364 aa9.21□□□□□ -0.93
BRCA1-201ENST00000352993 UVSSAQ2YD98 709 aa9.21□□□□□ -0.93
BRCA1-201ENST00000352993 TSPYL6Q8N831 410 aa9.21□□□□□ -0.93
BRCA1-201ENST00000352993 DIAPH1O60610 1272 aaKnown RBP9.21□□□□□ -0.94
BRCA1-201ENST00000352993 SRPK2P78362 688 aaKnown RBP9.21□□□□□ -0.94
BRCA1-201ENST00000352993 C16orf45Q96MC5 204 aaPredicted RBP9.21□□□□□ -0.94
BRCA1-201ENST00000352993 PYCARDQ9ULZ3 195 aa9.21□□□□□ -0.94
BRCA1-201ENST00000352993 MYOM1P52179 1685 aa9.21□□□□□ -0.94
BRCA1-201ENST00000352993 TRIM6-TRIM34B2RNG4 842 aa9.2□□□□□ -0.94
BRCA1-201ENST00000352993 KIF3BO15066 747 aa9.2□□□□□ -0.94
BRCA1-201ENST00000352993 HMOX1P09601 288 aa9.2□□□□□ -0.94
BRCA1-201ENST00000352993 RILPL2Q969X0 211 aa9.2□□□□□ -0.94
BRCA1-201ENST00000352993 IQGAP1P46940 1657 aa9.2□□□□□ -0.94
BRCA1-201ENST00000352993 GTF2F1P35269 517 aaKnown RBP eCLIP9.2□□□□□ -0.944e-8■■■□□ 16.5
BRCA1-201ENST00000352993 CCDC183Q5T5S1 534 aa9.2□□□□□ -0.94
BRCA1-201ENST00000352993 GIMAP6Q6P9H5 292 aa9.2□□□□□ -0.94
BRCA1-201ENST00000352993 TRERF1Q96PN7 1200 aa9.2□□□□□ -0.94
BRCA1-201ENST00000352993 BRD1O95696 1058 aa9.2□□□□□ -0.94
BRCA1-201ENST00000352993 PRKAR2BP31323 418 aa9.2□□□□□ -0.94
BRCA1-201ENST00000352993 KDM4AO75164 1064 aa9.19□□□□□ -0.94
BRCA1-201ENST00000352993 MRPL50Q8N5N7 158 aaKnown RBP9.19□□□□□ -0.94
BRCA1-201ENST00000352993 CEP170BQ9Y4F5 1589 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-201ENST00000352993 TWISTNBQ3B726 338 aaPredicted RBP9.19□□□□□ -0.94
BRCA1-201ENST00000352993 TSHZ3Q63HK5 1081 aa9.19□□□□□ -0.94
BRCA1-201ENST00000352993 API5Q9BZZ5 524 aaKnown RBP9.19□□□□□ -0.94
BRCA1-201ENST00000352993 TMEM51Q9NW97 253 aa9.19□□□□□ -0.94
BRCA1-201ENST00000352993 OGFRQ9NZT2 677 aa9.19□□□□□ -0.94
BRCA1-201ENST00000352993 CNPY2Q9Y2B0 182 aa9.19□□□□□ -0.94
BRCA1-201ENST00000352993 NOS1P29475 1434 aa9.19□□□□□ -0.94
BRCA1-201ENST00000352993 IL16Q14005 1332 aa9.18□□□□□ -0.94
BRCA1-201ENST00000352993 WDR33Q9C0J8 1336 aaKnown RBP9.18□□□□□ -0.94
BRCA1-201ENST00000352993 PLEKHF1Q96S99 279 aa9.18□□□□□ -0.94
BRCA1-201ENST00000352993 FEZ1Q99689 392 aa9.18□□□□□ -0.94
BRCA1-201ENST00000352993 LARP6Q9BRS8 491 aaKnown RBP9.18□□□□□ -0.94
BRCA1-201ENST00000352993 STRCP1A6NGW2 1772 aa9.18□□□□□ -0.94
BRCA1-201ENST00000352993 CEP152O94986 1710 aa9.18□□□□□ -0.94
BRCA1-201ENST00000352993 SPAG9O60271 1321 aaKnown RBP9.18□□□□□ -0.94
BRCA1-201ENST00000352993 VAMP4O75379 141 aa9.18□□□□□ -0.94
BRCA1-201ENST00000352993 MCM2P49736 904 aa9.18□□□□□ -0.94
BRCA1-201ENST00000352993 DCTPP1Q9H773 170 aa9.18□□□□□ -0.94
BRCA1-201ENST00000352993 STK26Q9P289 416 aa9.18□□□□□ -0.94
BRCA1-201ENST00000352993 CCDC66A2RUB6 948 aa9.18□□□□□ -0.94
BRCA1-201ENST00000352993 NPHP1O15259 732 aa9.18□□□□□ -0.94
BRCA1-201ENST00000352993 DTNBO60941 627 aa9.18□□□□□ -0.94
BRCA1-201ENST00000352993 MX1P20591 662 aa9.17□□□□□ -0.94
BRCA1-201ENST00000352993 PTGS1P23219 599 aa9.17□□□□□ -0.94
BRCA1-201ENST00000352993 NAA30Q147X3 362 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-201ENST00000352993 AFAP1Q8N556 730 aa9.17□□□□□ -0.94
BRCA1-201ENST00000352993 KIAA1524Q8TCG1 905 aa9.17□□□□□ -0.94
BRCA1-201ENST00000352993 VWDEQ8N2E2 1590 aa9.17□□□□□ -0.94
BRCA1-201ENST00000352993 CCDC112Q8NEF3 446 aa9.17□□□□□ -0.94
BRCA1-201ENST00000352993 SPTLC3Q9NUV7 552 aa9.17□□□□□ -0.94
BRCA1-201ENST00000352993 MED14O60244 1454 aa9.17□□□□□ -0.94
BRCA1-201ENST00000352993 EVC2Q86UK5 1308 aa9.17□□□□□ -0.94
BRCA1-201ENST00000352993 TPM3P06753 285 aa9.17□□□□□ -0.94
BRCA1-201ENST00000352993 TNNT1P13805 278 aa9.17□□□□□ -0.94
BRCA1-201ENST00000352993 TPD52L1Q16890 204 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-201ENST00000352993 EFCAB2Q5VUJ9 269 aa9.17□□□□□ -0.94
BRCA1-201ENST00000352993 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.17□□□□□ -0.94
BRCA1-201ENST00000352993 V9GYY5 206 aaPredicted RBP9.17□□□□□ -0.94
BRCA1-201ENST00000352993 SPATA31D1Q6ZQQ2 1576 aa9.16□□□□□ -0.94
BRCA1-201ENST00000352993 SHPRHQ149N8 1683 aa9.16□□□□□ -0.94
BRCA1-201ENST00000352993 FBLN1P23142 703 aa9.16□□□□□ -0.94
BRCA1-201ENST00000352993 SLC4A10Q6U841 1118 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms