RNA–Protein interactions for RNA: ENST00000351205.8

SMN1-201, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-201ENST00000351205 UTRNP46939 3433 aa23.49■■□□□ 1.35
SMN1-201ENST00000351205 SYTL4Q96C24 671 aaPredicted RBP23.49■■□□□ 1.35
SMN1-201ENST00000351205 CARD14Q9BXL6 1004 aa23.49■■□□□ 1.35
SMN1-201ENST00000351205 MTFR1LQ9H019 292 aa23.49■■□□□ 1.35
SMN1-201ENST00000351205 NSD3Q9BZ95 1437 aa23.49■■□□□ 1.35
SMN1-201ENST00000351205 LY75O60449 1722 aa23.48■■□□□ 1.35
SMN1-201ENST00000351205 HSP90AB2PQ58FF8 381 aa23.48■■□□□ 1.35
SMN1-201ENST00000351205 PCGF6Q9BYE7 350 aa23.48■■□□□ 1.35
SMN1-201ENST00000351205 CLSPNQ9HAW4 1339 aa23.48■■□□□ 1.35
SMN1-201ENST00000351205 FLT4P35916 1363 aa23.48■■□□□ 1.35
SMN1-201ENST00000351205 PRIM1P49642 420 aaKnown RBP23.47■■□□□ 1.35
SMN1-201ENST00000351205 NSD2O96028 1365 aa23.47■■□□□ 1.35
SMN1-201ENST00000351205 INSRP06213 1382 aa23.47■■□□□ 1.35
SMN1-201ENST00000351205 QSER1Q2KHR3 1735 aa23.47■■□□□ 1.35
SMN1-201ENST00000351205 KIF24Q5T7B8 1368 aa23.46■■□□□ 1.35
SMN1-201ENST00000351205 SGIP1Q9BQI5 828 aa23.46■■□□□ 1.35
SMN1-201ENST00000351205 CGNL1Q0VF96 1302 aa23.45■■□□□ 1.34
SMN1-201ENST00000351205 DCAF8L1A6NGE4 600 aa23.45■■□□□ 1.34
SMN1-201ENST00000351205 SLC27A3Q5K4L6 730 aa23.45■■□□□ 1.34
SMN1-201ENST00000351205 TUBGCP6Q96RT7 1819 aa23.45■■□□□ 1.34
SMN1-201ENST00000351205 RAPGEF4Q8WZA2 1011 aa23.44■■□□□ 1.34
SMN1-201ENST00000351205 AKT1S1Q96B36 256 aa23.44■■□□□ 1.34
SMN1-201ENST00000351205 ANKRD26Q9UPS8 1709 aa23.43■■□□□ 1.34
SMN1-201ENST00000351205 YY1P25490 414 aa23.43■■□□□ 1.34
SMN1-201ENST00000351205 KCNQ4P56696 695 aa23.42■■□□□ 1.34
SMN1-201ENST00000351205 FHDC1Q9C0D6 1143 aaPredicted RBP23.42■■□□□ 1.34
SMN1-201ENST00000351205 EMILIN1Q9Y6C2 1016 aa23.42■■□□□ 1.34
SMN1-201ENST00000351205 TATP17735 454 aaPredicted RBP23.41■■□□□ 1.34
SMN1-201ENST00000351205 SYT17Q9BSW7 474 aa23.4■■□□□ 1.34
SMN1-201ENST00000351205 MAP2P11137 1827 aaKnown RBP23.39■■□□□ 1.33
SMN1-201ENST00000351205 PKD1L3Q7Z443 1732 aa23.38■■□□□ 1.33
SMN1-201ENST00000351205 PNPLA7Q6ZV29 1317 aa23.37■■□□□ 1.33
SMN1-201ENST00000351205 PCDH11XQ9BZA7 1347 aa23.37■■□□□ 1.33
SMN1-201ENST00000351205 PCDH11YQ9BZA8 1340 aa23.37■■□□□ 1.33
SMN1-201ENST00000351205 ARXQ96QS3 562 aa23.37■■□□□ 1.33
SMN1-201ENST00000351205 COL24A1Q17RW2 1714 aa23.36■■□□□ 1.33
SMN1-201ENST00000351205 TOGARAM1Q9Y4F4 1720 aa23.36■■□□□ 1.33
SMN1-201ENST00000351205 PPM1GO15355 546 aaPredicted RBP23.36■■□□□ 1.33
SMN1-201ENST00000351205 TFCP2L1Q9NZI6 479 aa23.36■■□□□ 1.33
SMN1-201ENST00000351205 CCNL1Q9UK58 526 aaPredicted RBP23.36■■□□□ 1.33
SMN1-201ENST00000351205 NCAPD2Q15021 1401 aa23.35■■□□□ 1.33
SMN1-201ENST00000351205 POLR3GLQ9BT43 218 aa23.35■■□□□ 1.33
SMN1-201ENST00000351205 SLC16A10Q8TF71 515 aa23.34■■□□□ 1.33
SMN1-201ENST00000351205 ITGB4P16144 1822 aa23.33■■□□□ 1.33
SMN1-201ENST00000351205 C5P01031 1676 aa23.33■■□□□ 1.33
SMN1-201ENST00000351205 MAP3K5Q99683 1374 aa23.33■■□□□ 1.33
SMN1-201ENST00000351205 CYP27B1O15528 508 aa23.33■■□□□ 1.33
SMN1-201ENST00000351205 WASHC2AQ641Q2 1341 aa23.33■■□□□ 1.32
SMN1-201ENST00000351205 GOLGB1Q14789 3259 aaKnown RBP23.32■■□□□ 1.32
SMN1-201ENST00000351205 TAF1LQ8IZX4 1826 aa23.3■■□□□ 1.32
SMN1-201ENST00000351205 EIF4G2P78344 907 aaKnown RBP eCLIP23.29■■□□□ 1.32
SMN1-201ENST00000351205 MPRIPQ6WCQ1 1025 aa23.29■■□□□ 1.32
SMN1-201ENST00000351205 POLKQ9UBT6 870 aa23.29■■□□□ 1.32
SMN1-201ENST00000351205 PALLDQ8WX93 1383 aa23.28■■□□□ 1.32
SMN1-201ENST00000351205 HSPA5P11021 654 aaKnown RBP23.28■■□□□ 1.32
SMN1-201ENST00000351205 POLD1P28340 1107 aa23.28■■□□□ 1.32
SMN1-201ENST00000351205 EYA1Q99502 592 aa23.28■■□□□ 1.32
SMN1-201ENST00000351205 CHD4Q14839 1912 aa23.26■■□□□ 1.31
SMN1-201ENST00000351205 TNNT2P45379 298 aaPredicted RBP23.26■■□□□ 1.31
SMN1-201ENST00000351205 COL23A1Q86Y22 540 aaPredicted RBP23.25■■□□□ 1.31
SMN1-201ENST00000351205 KLHL34Q8N239 644 aa23.25■■□□□ 1.31
SMN1-201ENST00000351205 SPG7Q9UQ90 795 aa23.25■■□□□ 1.31
SMN1-201ENST00000351205 NKX1-1Q15270 411 aaPredicted RBP23.24■■□□□ 1.31
SMN1-201ENST00000351205 CCER1Q8TC90 406 aaPredicted RBP23.24■■□□□ 1.31
SMN1-201ENST00000351205 MSH5O43196 834 aa23.23■■□□□ 1.31
SMN1-201ENST00000351205 PANK3Q9H999 370 aa23.23■■□□□ 1.31
SMN1-201ENST00000351205 C4BP0C0L5 1744 aa23.22■■□□□ 1.31
SMN1-201ENST00000351205 EIF4A2Q14240 407 aaKnown RBP23.22■■□□□ 1.31
SMN1-201ENST00000351205 PIGBQ92521 554 aa23.21■■□□□ 1.31
SMN1-201ENST00000351205 SMARCC1Q92922 1105 aaPredicted RBP23.21■■□□□ 1.31
SMN1-201ENST00000351205 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.21■■□□□ 1.31
SMN1-201ENST00000351205 UBR3Q6ZT12 1888 aa23.18■■□□□ 1.3
SMN1-201ENST00000351205 HMGB2P26583 209 aaKnown RBP23.18■■□□□ 1.3
SMN1-201ENST00000351205 MSL1Q68DK7 614 aa23.18■■□□□ 1.3
SMN1-201ENST00000351205 PHKG2P15735 406 aa23.17■■□□□ 1.3
SMN1-201ENST00000351205 GPR162Q16538 588 aa23.17■■□□□ 1.3
SMN1-201ENST00000351205 IFNL2Q8IZJ0 200 aa23.17■■□□□ 1.3
SMN1-201ENST00000351205 NLGN2Q8NFZ4 835 aa23.17■■□□□ 1.3
SMN1-201ENST00000351205 IGSF1Q8N6C5 1336 aa23.16■■□□□ 1.3
SMN1-201ENST00000351205 ZNF784Q8NCA9 323 aaPredicted RBP23.16■■□□□ 1.3
SMN1-201ENST00000351205 FLAD1Q8NFF5 587 aa23.16■■□□□ 1.3
SMN1-201ENST00000351205 TMOD3Q9NYL9 352 aa23.16■■□□□ 1.3
SMN1-201ENST00000351205 PLEKHG2Q9H7P9 1386 aa23.15■■□□□ 1.3
SMN1-201ENST00000351205 AK7Q96M32 723 aa23.15■■□□□ 1.3
SMN1-201ENST00000351205 AMIGO3Q86WK7 504 aa23.14■■□□□ 1.29
SMN1-201ENST00000351205 LOC102724428A0A0B4J2F2 783 aa23.13■■□□□ 1.29
SMN1-201ENST00000351205 SIK1P57059 783 aa23.13■■□□□ 1.29
SMN1-201ENST00000351205 PELP1Q8IZL8 1130 aaKnown RBP23.13■■□□□ 1.29
SMN1-201ENST00000351205 ASAP1Q9ULH1 1129 aa23.13■■□□□ 1.29
SMN1-201ENST00000351205 LINC00116Q8NCU8 138 aa23.12■■□□□ 1.29
SMN1-201ENST00000351205 MORC1Q86VD1 984 aa23.11■■□□□ 1.29
SMN1-201ENST00000351205 PHF14O94880 888 aa23.1■■□□□ 1.29
SMN1-201ENST00000351205 SMIM5Q71RC9 77 aa23.1■■□□□ 1.29
SMN1-201ENST00000351205 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.09■■□□□ 1.29
SMN1-201ENST00000351205 ITPK1Q13572 414 aa23.09■■□□□ 1.29
SMN1-201ENST00000351205 ATG3Q9NT62 314 aa23.09■■□□□ 1.29
SMN1-201ENST00000351205 KNSTRNQ9Y448 316 aa23.08■■□□□ 1.29
SMN1-201ENST00000351205 SSFA2P28290 1259 aa23.07■■□□□ 1.28
SMN1-201ENST00000351205 ATP6V1AP38606 617 aa23.07■■□□□ 1.28
SMN1-201ENST00000351205 YBX3P16989 372 aaKnown RBP eCLIP23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms