RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 MVPQ14764 893 aaKnown RBP8.88□□□□□ -0.99
TRIM55-203ENST00000350034 ATF7IPQ6VMQ6 1270 aa8.88□□□□□ -0.99
TRIM55-203ENST00000350034 KRT28Q7Z3Y7 464 aa8.88□□□□□ -0.99
TRIM55-203ENST00000350034 ARHGEF25Q86VW2 580 aa8.88□□□□□ -0.99
TRIM55-203ENST00000350034 DZIP1LQ8IYY4 767 aaKnown RBP8.88□□□□□ -0.99
TRIM55-203ENST00000350034 MRPL50Q8N5N7 158 aaKnown RBP8.88□□□□□ -0.99
TRIM55-203ENST00000350034 TSPYL6Q8N831 410 aa8.88□□□□□ -0.99
TRIM55-203ENST00000350034 GAS2L2Q8NHY3 880 aa8.88□□□□□ -0.99
TRIM55-203ENST00000350034 ARHGAP45Q92619 1136 aa8.88□□□□□ -0.99
TRIM55-203ENST00000350034 STRCP1A6NGW2 1772 aa8.88□□□□□ -0.99
TRIM55-203ENST00000350034 NCAPD2Q15021 1401 aa8.88□□□□□ -0.99
TRIM55-203ENST00000350034 KIAA0232Q92628 1395 aa8.87□□□□□ -0.99
TRIM55-203ENST00000350034 IPO8O15397 1037 aaKnown RBP8.87□□□□□ -0.99
TRIM55-203ENST00000350034 IGHDP01880 384 aa8.87□□□□□ -0.99
TRIM55-203ENST00000350034 GCP02774 474 aa8.87□□□□□ -0.99
TRIM55-203ENST00000350034 C8orf58Q8NAV2 365 aa8.87□□□□□ -0.99
TRIM55-203ENST00000350034 NOB1Q9ULX3 412 aaKnown RBP8.87□□□□□ -0.99
TRIM55-203ENST00000350034 DLG5Q8TDM6 1919 aa8.86□□□□□ -0.99
TRIM55-203ENST00000350034 ATF3P18847 181 aa8.86□□□□□ -0.99
TRIM55-203ENST00000350034 TWISTNBQ3B726 338 aaPredicted RBP8.86□□□□□ -0.99
TRIM55-203ENST00000350034 CADPS2Q86UW7 1296 aa8.86□□□□□ -0.99
TRIM55-203ENST00000350034 LAS1LQ9Y4W2 734 aaKnown RBP8.86□□□□□ -0.99
TRIM55-203ENST00000350034 PCDHB15Q9Y5E8 787 aa8.86□□□□□ -0.99
TRIM55-203ENST00000350034 MSH6P52701 1360 aa8.86□□□□□ -0.99
TRIM55-203ENST00000350034 YY1P25490 414 aa8.85□□□□□ -0.99
TRIM55-203ENST00000350034 MCM10Q7L590 875 aa8.85□□□□□ -0.99
TRIM55-203ENST00000350034 HAP1P54257 671 aaPredicted RBP8.84□□□□□ -0.99
TRIM55-203ENST00000350034 XPCQ01831 940 aaPredicted RBP8.84□□□□□ -0.99
TRIM55-203ENST00000350034 NBPF6Q5VWK0 638 aa8.84□□□□□ -0.99
TRIM55-203ENST00000350034 FTSJ3Q8IY81 847 aaKnown RBP8.84□□□□□ -0.99
TRIM55-203ENST00000350034 NBPF4Q96M43 638 aa8.84□□□□□ -0.99
TRIM55-203ENST00000350034 BABAM1Q9NWV8 329 aa8.84□□□□□ -0.99
TRIM55-203ENST00000350034 DDX19BQ9UMR2 479 aa8.84□□□□□ -0.99
TRIM55-203ENST00000350034 ALS2Q96Q42 1657 aa8.84□□□□□ -0.99
TRIM55-203ENST00000350034 LRRC37A3O60309 1634 aa8.83□□□□□ -1
TRIM55-203ENST00000350034 ABCC4O15439 1325 aa8.83□□□□□ -1
TRIM55-203ENST00000350034 GNAT3A8MTJ3 354 aa8.83□□□□□ -1
TRIM55-203ENST00000350034 TMEM57Q8N5G2 664 aa8.83□□□□□ -1
TRIM55-203ENST00000350034 IL17REQ8NFR9 667 aa8.83□□□□□ -1
TRIM55-203ENST00000350034 RTF1Q92541 710 aaKnown RBP8.83□□□□□ -1
TRIM55-203ENST00000350034 BACH2Q9BYV9 841 aa8.83□□□□□ -1
TRIM55-203ENST00000350034 ZBTB40Q9NUA8 1239 aa8.83□□□□□ -1
TRIM55-203ENST00000350034 MAP3K5Q99683 1374 aa8.83□□□□□ -1
TRIM55-203ENST00000350034 PXDNQ92626 1479 aa8.83□□□□□ -1
TRIM55-203ENST00000350034 NPHP3Q7Z494 1330 aa8.82□□□□□ -1
TRIM55-203ENST00000350034 LTN1O94822 1766 aa8.82□□□□□ -1
TRIM55-203ENST00000350034 PDE4AP27815 886 aa8.82□□□□□ -1
TRIM55-203ENST00000350034 MAPK8IP2Q13387 824 aaPredicted RBP8.82□□□□□ -1
TRIM55-203ENST00000350034 HDAC1Q13547 482 aaPredicted RBP8.82□□□□□ -1
TRIM55-203ENST00000350034 SKAP1Q86WV1 359 aa8.82□□□□□ -1
TRIM55-203ENST00000350034 LTV1Q96GA3 475 aaPredicted RBP8.82□□□□□ -1
TRIM55-203ENST00000350034 API5Q9BZZ5 524 aaKnown RBP8.82□□□□□ -1
TRIM55-203ENST00000350034 CEMIPQ8WUJ3 1361 aa8.82□□□□□ -1
TRIM55-203ENST00000350034 CAMTA1Q9Y6Y1 1673 aa8.81□□□□□ -1
TRIM55-203ENST00000350034 SOS1Q07889 1333 aaPredicted RBP8.81□□□□□ -1
TRIM55-203ENST00000350034 SPATA31A3Q5VYP0 1347 aa8.81□□□□□ -1
TRIM55-203ENST00000350034 TNS3Q68CZ2 1445 aa8.81□□□□□ -1
TRIM55-203ENST00000350034 ELL2O00472 640 aaPredicted RBP8.81□□□□□ -1
TRIM55-203ENST00000350034 KRT24Q2M2I5 525 aa8.81□□□□□ -1
TRIM55-203ENST00000350034 ITPRIPQ8IWB1 547 aa8.81□□□□□ -1
TRIM55-203ENST00000350034 RWDD1Q9H446 243 aaPredicted RBP8.81□□□□□ -1
TRIM55-203ENST00000350034 RGS12O14924 1447 aa8.8□□□□□ -1
TRIM55-203ENST00000350034 ABCC6O95255 1503 aa8.8□□□□□ -1
TRIM55-203ENST00000350034 ZBTB7BO15156 539 aaPredicted RBP8.8□□□□□ -1
TRIM55-203ENST00000350034 BRINP3Q76B58 766 aa8.8□□□□□ -1
TRIM55-203ENST00000350034 USHBP1Q8N6Y0 703 aa8.8□□□□□ -1
TRIM55-203ENST00000350034 ANKRD24Q8TF21 1146 aa8.8□□□□□ -1
TRIM55-203ENST00000350034 CHMP4BQ9H444 224 aaKnown RBP8.8□□□□□ -1
TRIM55-203ENST00000350034 AXIN2Q9Y2T1 843 aa8.8□□□□□ -1
TRIM55-203ENST00000350034 LMO7Q8WWI1 1683 aa8.8□□□□□ -1
TRIM55-203ENST00000350034 XIRP1Q702N8 1843 aaKnown RBP8.8□□□□□ -1
TRIM55-203ENST00000350034 CPDO75976 1380 aa8.79□□□□□ -1
TRIM55-203ENST00000350034 PLEKHG2Q9H7P9 1386 aa8.79□□□□□ -1
TRIM55-203ENST00000350034 TAF7Q15545 349 aaPredicted RBP8.79□□□□□ -1
TRIM55-203ENST00000350034 AMOTQ4VCS5 1084 aa8.79□□□□□ -1
TRIM55-203ENST00000350034 PLEKHO1Q53GL0 409 aaPredicted RBP8.79□□□□□ -1
TRIM55-203ENST00000350034 INTS3Q68E01 1043 aaKnown RBP8.79□□□□□ -1
TRIM55-203ENST00000350034 SMC5Q8IY18 1101 aa8.79□□□□□ -1
TRIM55-203ENST00000350034 DDX17Q92841 729 aaKnown RBP8.79□□□□□ -1
TRIM55-203ENST00000350034 LRRC59Q96AG4 307 aaKnown RBP8.79□□□□□ -1
TRIM55-203ENST00000350034 TSPYL4Q9UJ04 414 aa8.79□□□□□ -1
TRIM55-203ENST00000350034 CEP350Q5VT06 3117 aa8.79□□□□□ -1
TRIM55-203ENST00000350034 OVOS2A0A0G2JMS6 1433 aa8.79□□□□□ -1
TRIM55-203ENST00000350034 PTPRCP08575 1304 aa8.79□□□□□ -1
TRIM55-203ENST00000350034 ERBB3P21860 1342 aa8.79□□□□□ -1
TRIM55-203ENST00000350034 SOS2Q07890 1332 aaPredicted RBP8.79□□□□□ -1
TRIM55-203ENST00000350034 AKAP4Q5JQC9 854 aa8.78□□□□□ -1
TRIM55-203ENST00000350034 LMOD2Q6P5Q4 547 aa8.78□□□□□ -1
TRIM55-203ENST00000350034 MIS18AQ9NYP9 233 aa8.78□□□□□ -1
TRIM55-203ENST00000350034 PDZRN3Q9UPQ7 1066 aa8.78□□□□□ -1
TRIM55-203ENST00000350034 COL18A1P39060 1754 aa8.78□□□□□ -1
TRIM55-203ENST00000350034 FAM161AQ3B820 660 aa8.77□□□□□ -1.01
TRIM55-203ENST00000350034 C8orf34Q49A92 452 aa8.77□□□□□ -1.01
TRIM55-203ENST00000350034 SLAIN2Q9P270 581 aa8.77□□□□□ -1.01
TRIM55-203ENST00000350034 CRYBG1Q9Y4K1 1723 aa8.77□□□□□ -1.01
TRIM55-203ENST00000350034 ZBTB7CA1YPR0 619 aa8.76□□□□□ -1.01
TRIM55-203ENST00000350034 RNMTO43148 476 aaKnown RBP8.76□□□□□ -1.01
TRIM55-203ENST00000350034 RGS3P49796 1198 aa8.76□□□□□ -1.01
TRIM55-203ENST00000350034 ZC3H6P61129 1189 aaKnown RBP8.76□□□□□ -1.01
TRIM55-203ENST00000350034 ZNF530Q6P9A1 599 aaPredicted RBP8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms