RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 MCM10Q7L590 875 aa21.18■□□□□ 0.98
SAMM50-201ENST00000350028 C14orf37Q86TY3 774 aa21.18■□□□□ 0.98
SAMM50-201ENST00000350028 RTF1Q92541 710 aaKnown RBP21.18■□□□□ 0.98
SAMM50-201ENST00000350028 API5Q9BZZ5 524 aaKnown RBP21.18■□□□□ 0.98
SAMM50-201ENST00000350028 CRB1P82279 1406 aa21.18■□□□□ 0.98
SAMM50-201ENST00000350028 VIRMAQ69YN4 1812 aaKnown RBP21.17■□□□□ 0.98
SAMM50-201ENST00000350028 DDRGK1Q96HY6 314 aa21.16■□□□□ 0.98
SAMM50-201ENST00000350028 KCNH5Q8NCM2 988 aa21.15■□□□□ 0.98
SAMM50-201ENST00000350028 ABCC4O15439 1325 aa21.15■□□□□ 0.98
SAMM50-201ENST00000350028 XIRP1Q702N8 1843 aaKnown RBP21.15■□□□□ 0.98
SAMM50-201ENST00000350028 AEBP2Q6ZN18 517 aaPredicted RBP21.14■□□□□ 0.97
SAMM50-201ENST00000350028 IP6K1Q92551 441 aa21.14■□□□□ 0.97
SAMM50-201ENST00000350028 LTN1O94822 1766 aa21.14■□□□□ 0.97
SAMM50-201ENST00000350028 NFAT5O94916 1531 aa21.13■□□□□ 0.97
SAMM50-201ENST00000350028 ZBTB7BO15156 539 aaPredicted RBP21.13■□□□□ 0.97
SAMM50-201ENST00000350028 PROSER2Q86WR7 435 aaPredicted RBP21.13■□□□□ 0.97
SAMM50-201ENST00000350028 SMC5Q8IY18 1101 aa21.13■□□□□ 0.97
SAMM50-201ENST00000350028 FOXO3O43524 673 aa21.12■□□□□ 0.97
SAMM50-201ENST00000350028 TMEM94Q12767 1356 aa21.11■□□□□ 0.97
SAMM50-201ENST00000350028 PHRF1Q9P1Y6 1649 aaKnown RBP21.1■□□□□ 0.97
SAMM50-201ENST00000350028 GNAT3A8MTJ3 354 aa21.09■□□□□ 0.97
SAMM50-201ENST00000350028 ORAI2Q96SN7 254 aa21.09■□□□□ 0.97
SAMM50-201ENST00000350028 LTV1Q96GA3 475 aaPredicted RBP21.09■□□□□ 0.97
SAMM50-201ENST00000350028 TSPYL4Q9UJ04 414 aa21.09■□□□□ 0.97
SAMM50-201ENST00000350028 KIF1AQ12756 1690 aa21.08■□□□□ 0.97
SAMM50-201ENST00000350028 C19orf44Q9H6X5 657 aa21.08■□□□□ 0.97
SAMM50-201ENST00000350028 LRRC37A3O60309 1634 aa21.07■□□□□ 0.96
SAMM50-201ENST00000350028 PTPRCP08575 1304 aa21.07■□□□□ 0.96
SAMM50-201ENST00000350028 KRT24Q2M2I5 525 aa21.07■□□□□ 0.96
SAMM50-201ENST00000350028 BABAM1Q9NWV8 329 aa21.07■□□□□ 0.96
SAMM50-201ENST00000350028 MAP3K5Q99683 1374 aa21.06■□□□□ 0.96
SAMM50-201ENST00000350028 SLIT3O75094 1523 aa21.06■□□□□ 0.96
SAMM50-201ENST00000350028 INTS3Q68E01 1043 aaKnown RBP21.06■□□□□ 0.96
SAMM50-201ENST00000350028 LTBP4Q8N2S1 1624 aa21.05■□□□□ 0.96
SAMM50-201ENST00000350028 C1orf167Q5SNV9 1468 aa21.05■□□□□ 0.96
SAMM50-201ENST00000350028 TRPM3Q9HCF6 1732 aaPredicted RBP21.04■□□□□ 0.96
SAMM50-201ENST00000350028 SOS1Q07889 1333 aaPredicted RBP21.04■□□□□ 0.96
SAMM50-201ENST00000350028 NUCB1Q02818 461 aa21.04■□□□□ 0.96
SAMM50-201ENST00000350028 GCC1Q96CN9 775 aa21.04■□□□□ 0.96
SAMM50-201ENST00000350028 MIS18AQ9NYP9 233 aa21.04■□□□□ 0.96
SAMM50-201ENST00000350028 NCOA3Q9Y6Q9 1424 aa21.03■□□□□ 0.96
SAMM50-201ENST00000350028 GCP02774 474 aa21.03■□□□□ 0.96
SAMM50-201ENST00000350028 KRT28Q7Z3Y7 464 aa21.03■□□□□ 0.96
SAMM50-201ENST00000350028 MSH6P52701 1360 aa21.03■□□□□ 0.96
SAMM50-201ENST00000350028 USP19O94966 1318 aa21.02■□□□□ 0.96
SAMM50-201ENST00000350028 ARHGEF25Q86VW2 580 aa21.01■□□□□ 0.95
SAMM50-201ENST00000350028 RGS12O14924 1447 aa21.01■□□□□ 0.95
SAMM50-201ENST00000350028 MST1RQ04912 1400 aa21.01■□□□□ 0.95
SAMM50-201ENST00000350028 TAF7Q15545 349 aaPredicted RBP21.01■□□□□ 0.95
SAMM50-201ENST00000350028 NBPF6Q5VWK0 638 aa21.01■□□□□ 0.95
SAMM50-201ENST00000350028 IL17REQ8NFR9 667 aa21.01■□□□□ 0.95
SAMM50-201ENST00000350028 NBPF4Q96M43 638 aa21.01■□□□□ 0.95
SAMM50-201ENST00000350028 SLC4A2P04920 1241 aa21■□□□□ 0.95
SAMM50-201ENST00000350028 USHBP1Q8N6Y0 703 aa21■□□□□ 0.95
SAMM50-201ENST00000350028 DCCP43146 1447 aa20.99■□□□□ 0.95
SAMM50-201ENST00000350028 ZBTB7CA1YPR0 619 aa20.98■□□□□ 0.95
SAMM50-201ENST00000350028 XPCQ01831 940 aaPredicted RBP20.98■□□□□ 0.95
SAMM50-201ENST00000350028 CHD1LQ86WJ1 897 aa20.98■□□□□ 0.95
SAMM50-201ENST00000350028 ATF3P18847 181 aa20.98■□□□□ 0.95
SAMM50-201ENST00000350028 C1orf115Q9H7X2 142 aa20.98■□□□□ 0.95
SAMM50-201ENST00000350028 STK31Q9BXU1 1019 aa20.97■□□□□ 0.95
SAMM50-201ENST00000350028 UPF2Q9HAU5 1272 aaKnown RBP20.97■□□□□ 0.95
SAMM50-201ENST00000350028 SEC24BO95487 1268 aa20.96■□□□□ 0.95
SAMM50-201ENST00000350028 CCDC30Q5VVM6 783 aa20.96■□□□□ 0.95
SAMM50-201ENST00000350028 LMOD2Q6P5Q4 547 aa20.96■□□□□ 0.95
SAMM50-201ENST00000350028 SIRT2Q8IXJ6 389 aa20.96■□□□□ 0.95
SAMM50-201ENST00000350028 DAXXQ9UER7 740 aaPredicted RBP20.96■□□□□ 0.95
SAMM50-201ENST00000350028 NCAPD2Q15021 1401 aa20.96■□□□□ 0.95
SAMM50-201ENST00000350028 PLEKHO1Q53GL0 409 aaPredicted RBP20.95■□□□□ 0.94
SAMM50-201ENST00000350028 CEMIPQ8WUJ3 1361 aa20.95■□□□□ 0.94
SAMM50-201ENST00000350028 RGPD2P0DJD1 1756 aa20.95■□□□□ 0.94
SAMM50-201ENST00000350028 AMOTQ4VCS5 1084 aa20.95■□□□□ 0.94
SAMM50-201ENST00000350028 CACNA1FO60840 1977 aa20.94■□□□□ 0.94
SAMM50-201ENST00000350028 ALS2Q96Q42 1657 aa20.94■□□□□ 0.94
SAMM50-201ENST00000350028 RPAP2Q8IXW5 612 aaPredicted RBP20.94■□□□□ 0.94
SAMM50-201ENST00000350028 LNPKQ9C0E8 428 aa20.94■□□□□ 0.94
SAMM50-201ENST00000350028 CCT4P50991 539 aaKnown RBP20.93■□□□□ 0.94
SAMM50-201ENST00000350028 ANKRD45Q5TZF3 282 aa20.93■□□□□ 0.94
SAMM50-201ENST00000350028 AKAP4Q5JQC9 854 aa20.92■□□□□ 0.94
SAMM50-201ENST00000350028 ANKRD44Q8N8A2 993 aa20.92■□□□□ 0.94
SAMM50-201ENST00000350028 ANKRD24Q8TF21 1146 aa20.92■□□□□ 0.94
SAMM50-201ENST00000350028 LMO7Q8WWI1 1683 aa20.92■□□□□ 0.94
SAMM50-201ENST00000350028 G2E3Q7L622 706 aa20.92■□□□□ 0.94
SAMM50-201ENST00000350028 LRRC59Q96AG4 307 aaKnown RBP20.92■□□□□ 0.94
SAMM50-201ENST00000350028 FAM208AQ9UK61 1670 aaKnown RBP20.91■□□□□ 0.94
SAMM50-201ENST00000350028 CAMTA1Q9Y6Y1 1673 aa20.91■□□□□ 0.94
SAMM50-201ENST00000350028 MED1Q15648 1581 aaPredicted RBP20.91■□□□□ 0.94
SAMM50-201ENST00000350028 CADPS2Q86UW7 1296 aa20.91■□□□□ 0.94
SAMM50-201ENST00000350028 CHMP4AQ9BY43 222 aa20.9■□□□□ 0.94
SAMM50-201ENST00000350028 DCTPP1Q9H773 170 aa20.9■□□□□ 0.94
SAMM50-201ENST00000350028 ZNF530Q6P9A1 599 aaPredicted RBP20.9■□□□□ 0.94
SAMM50-201ENST00000350028 TBC1D32Q96NH3 1257 aa20.89■□□□□ 0.93
SAMM50-201ENST00000350028 ATP10DQ9P241 1426 aa20.88■□□□□ 0.93
SAMM50-201ENST00000350028 HOXB7P09629 217 aa20.87■□□□□ 0.93
SAMM50-201ENST00000350028 FLIIQ13045 1269 aa20.87■□□□□ 0.93
SAMM50-201ENST00000350028 OVOS2A0A0G2JMS6 1433 aa20.87■□□□□ 0.93
SAMM50-201ENST00000350028 BMP2KLQ5H9B9 411 aa20.87■□□□□ 0.93
SAMM50-201ENST00000350028 CEP85Q6P2H3 762 aa20.87■□□□□ 0.93
SAMM50-201ENST00000350028 MEIS3Q99687 375 aa20.87■□□□□ 0.93
SAMM50-201ENST00000350028 LGR6Q9HBX8 967 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms