RNA–Protein interactions for RNA: ENST00000349505.4

HDAC10-202, Transcript of histone deacetylase 10, humanhuman

TSL 1 (best) BASIC

Gene HDAC10, Length 1,950 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC10-202ENST00000349505 SLIT3O75094 1523 aa22.87■■□□□ 1.25
HDAC10-202ENST00000349505 HTATSF1O43719 755 aaKnown RBP22.87■■□□□ 1.25
HDAC10-202ENST00000349505 C8orf58Q8NAV2 365 aa22.87■■□□□ 1.25
HDAC10-202ENST00000349505 KIAA0232Q92628 1395 aa22.86■■□□□ 1.25
HDAC10-202ENST00000349505 RTF1Q92541 710 aaKnown RBP22.86■■□□□ 1.25
HDAC10-202ENST00000349505 ITPRIPQ8IWB1 547 aa22.85■■□□□ 1.25
HDAC10-202ENST00000349505 RWDD1Q9H446 243 aaPredicted RBP22.85■■□□□ 1.25
HDAC10-202ENST00000349505 STRCP1A6NGW2 1772 aa22.85■■□□□ 1.25
HDAC10-202ENST00000349505 MST1RQ04912 1400 aa22.85■■□□□ 1.25
HDAC10-202ENST00000349505 DEKP35659 375 aaKnown RBP22.85■■□□□ 1.25
HDAC10-202ENST00000349505 TMEM57Q8N5G2 664 aa22.84■■□□□ 1.25
HDAC10-202ENST00000349505 TMEM94Q12767 1356 aa22.84■■□□□ 1.25
HDAC10-202ENST00000349505 ELL2O00472 640 aaPredicted RBP22.83■■□□□ 1.24
HDAC10-202ENST00000349505 USP19O94966 1318 aa22.82■■□□□ 1.24
HDAC10-202ENST00000349505 ATF3P18847 181 aa22.81■■□□□ 1.24
HDAC10-202ENST00000349505 KRT28Q7Z3Y7 464 aa22.81■■□□□ 1.24
HDAC10-202ENST00000349505 LRRC37A3O60309 1634 aa22.81■■□□□ 1.24
HDAC10-202ENST00000349505 GCP02774 474 aa22.81■■□□□ 1.24
HDAC10-202ENST00000349505 LTV1Q96GA3 475 aaPredicted RBP22.8■■□□□ 1.24
HDAC10-202ENST00000349505 CHMP4BQ9H444 224 aaKnown RBP22.8■■□□□ 1.24
HDAC10-202ENST00000349505 ZBTB40Q9NUA8 1239 aa22.8■■□□□ 1.24
HDAC10-202ENST00000349505 GNAT3A8MTJ3 354 aa22.79■■□□□ 1.24
HDAC10-202ENST00000349505 HDAC1Q13547 482 aaPredicted RBP22.79■■□□□ 1.24
HDAC10-202ENST00000349505 RGS3P49796 1198 aa22.78■■□□□ 1.24
HDAC10-202ENST00000349505 XPCQ01831 940 aaPredicted RBP22.78■■□□□ 1.24
HDAC10-202ENST00000349505 ARHGEF25Q86VW2 580 aa22.78■■□□□ 1.24
HDAC10-202ENST00000349505 ABCC4O15439 1325 aa22.78■■□□□ 1.24
HDAC10-202ENST00000349505 ALS2Q96Q42 1657 aa22.78■■□□□ 1.24
HDAC10-202ENST00000349505 API5Q9BZZ5 524 aaKnown RBP22.78■■□□□ 1.24
HDAC10-202ENST00000349505 MAP3K5Q99683 1374 aa22.77■■□□□ 1.24
HDAC10-202ENST00000349505 FAM161AQ3B820 660 aa22.77■■□□□ 1.24
HDAC10-202ENST00000349505 HSPA2P54652 639 aa22.76■■□□□ 1.23
HDAC10-202ENST00000349505 NBR1Q14596 966 aa22.76■■□□□ 1.23
HDAC10-202ENST00000349505 CADPS2Q86UW7 1296 aa22.76■■□□□ 1.23
HDAC10-202ENST00000349505 MSH6P52701 1360 aa22.75■■□□□ 1.23
HDAC10-202ENST00000349505 TSPYL4Q9UJ04 414 aa22.75■■□□□ 1.23
HDAC10-202ENST00000349505 NBPF6Q5VWK0 638 aa22.74■■□□□ 1.23
HDAC10-202ENST00000349505 NBPF4Q96M43 638 aa22.74■■□□□ 1.23
HDAC10-202ENST00000349505 NPM2Q86SE8 214 aaKnown RBP22.74■■□□□ 1.23
HDAC10-202ENST00000349505 BABAM1Q9NWV8 329 aa22.74■■□□□ 1.23
HDAC10-202ENST00000349505 NCAPD2Q15021 1401 aa22.73■■□□□ 1.23
HDAC10-202ENST00000349505 LMOD2Q6P5Q4 547 aa22.73■■□□□ 1.23
HDAC10-202ENST00000349505 LMTK3Q96Q04 1460 aa22.73■■□□□ 1.23
HDAC10-202ENST00000349505 ZBTB7BO15156 539 aaPredicted RBP22.72■■□□□ 1.23
HDAC10-202ENST00000349505 KRT24Q2M2I5 525 aa22.72■■□□□ 1.23
HDAC10-202ENST00000349505 C8orf34Q49A92 452 aa22.72■■□□□ 1.23
HDAC10-202ENST00000349505 USHBP1Q8N6Y0 703 aa22.72■■□□□ 1.23
HDAC10-202ENST00000349505 PDZRN3Q9UPQ7 1066 aa22.71■■□□□ 1.23
HDAC10-202ENST00000349505 RGPD2P0DJD1 1756 aa22.7■■□□□ 1.23
HDAC10-202ENST00000349505 CAMTA1Q9Y6Y1 1673 aa22.7■■□□□ 1.22
HDAC10-202ENST00000349505 PTPRCP08575 1304 aa22.7■■□□□ 1.22
HDAC10-202ENST00000349505 NPHP3Q7Z494 1330 aa22.7■■□□□ 1.22
HDAC10-202ENST00000349505 ZBTB7CA1YPR0 619 aa22.7■■□□□ 1.22
HDAC10-202ENST00000349505 IL17REQ8NFR9 667 aa22.7■■□□□ 1.22
HDAC10-202ENST00000349505 STRCQ7RTU9 1775 aa22.69■■□□□ 1.22
HDAC10-202ENST00000349505 SOS1Q07889 1333 aaPredicted RBP22.69■■□□□ 1.22
HDAC10-202ENST00000349505 KDM4FA0A1W2PPD8 638 aa22.69■■□□□ 1.22
HDAC10-202ENST00000349505 MIS18AQ9NYP9 233 aa22.69■■□□□ 1.22
HDAC10-202ENST00000349505 MED1Q15648 1581 aaPredicted RBP22.69■■□□□ 1.22
HDAC10-202ENST00000349505 XIRP1Q702N8 1843 aaKnown RBP22.68■■□□□ 1.22
HDAC10-202ENST00000349505 SMC5Q8IY18 1101 aa22.68■■□□□ 1.22
HDAC10-202ENST00000349505 VIRMAQ69YN4 1812 aaKnown RBP22.68■■□□□ 1.22
HDAC10-202ENST00000349505 CEMIPQ8WUJ3 1361 aa22.68■■□□□ 1.22
HDAC10-202ENST00000349505 TAF7Q15545 349 aaPredicted RBP22.67■■□□□ 1.22
HDAC10-202ENST00000349505 ANKRD24Q8TF21 1146 aa22.67■■□□□ 1.22
HDAC10-202ENST00000349505 RGS12O14924 1447 aa22.66■■□□□ 1.22
HDAC10-202ENST00000349505 INTS3Q68E01 1043 aaKnown RBP22.66■■□□□ 1.22
HDAC10-202ENST00000349505 LMO7Q8WWI1 1683 aa22.65■■□□□ 1.22
HDAC10-202ENST00000349505 AMOTQ4VCS5 1084 aa22.65■■□□□ 1.22
HDAC10-202ENST00000349505 LRRC59Q96AG4 307 aaKnown RBP22.65■■□□□ 1.22
HDAC10-202ENST00000349505 DAXXQ9UER7 740 aaPredicted RBP22.65■■□□□ 1.22
HDAC10-202ENST00000349505 TNS3Q68CZ2 1445 aa22.64■■□□□ 1.22
HDAC10-202ENST00000349505 PLEKHO1Q53GL0 409 aaPredicted RBP22.64■■□□□ 1.21
HDAC10-202ENST00000349505 PXDNQ92626 1479 aa22.63■■□□□ 1.21
HDAC10-202ENST00000349505 SLC4A2P04920 1241 aa22.63■■□□□ 1.21
HDAC10-202ENST00000349505 AKAP4Q5JQC9 854 aa22.63■■□□□ 1.21
HDAC10-202ENST00000349505 AXIN2Q9Y2T1 843 aa22.63■■□□□ 1.21
HDAC10-202ENST00000349505 ABCC6O95255 1503 aa22.62■■□□□ 1.21
HDAC10-202ENST00000349505 ERBB3P21860 1342 aa22.61■■□□□ 1.21
HDAC10-202ENST00000349505 RGPD5Q99666 1765 aa22.61■■□□□ 1.21
HDAC10-202ENST00000349505 CACNA1FO60840 1977 aa22.61■■□□□ 1.21
HDAC10-202ENST00000349505 PLEKHG5O94827 1062 aa22.6■■□□□ 1.21
HDAC10-202ENST00000349505 FAM208AQ9UK61 1670 aaKnown RBP22.6■■□□□ 1.21
HDAC10-202ENST00000349505 OVOS2A0A0G2JMS6 1433 aa22.6■■□□□ 1.21
HDAC10-202ENST00000349505 CCDC30Q5VVM6 783 aa22.59■■□□□ 1.21
HDAC10-202ENST00000349505 DDX17Q92841 729 aaKnown RBP22.59■■□□□ 1.21
HDAC10-202ENST00000349505 STK31Q9BXU1 1019 aa22.59■■□□□ 1.21
HDAC10-202ENST00000349505 SPATA31A3Q5VYP0 1347 aa22.59■■□□□ 1.21
HDAC10-202ENST00000349505 ZC3H6P61129 1189 aaKnown RBP22.59■■□□□ 1.21
HDAC10-202ENST00000349505 ZNF530Q6P9A1 599 aaPredicted RBP22.59■■□□□ 1.21
HDAC10-202ENST00000349505 GCC1Q96CN9 775 aa22.59■■□□□ 1.21
HDAC10-202ENST00000349505 CRYBG1Q9Y4K1 1723 aa22.58■■□□□ 1.21
HDAC10-202ENST00000349505 COL18A1P39060 1754 aa22.57■■□□□ 1.2
HDAC10-202ENST00000349505 NUCB1Q02818 461 aa22.57■■□□□ 1.2
HDAC10-202ENST00000349505 KDM3BQ7LBC6 1761 aa22.56■■□□□ 1.2
HDAC10-202ENST00000349505 C1orf141Q5JVX7 400 aa22.56■■□□□ 1.2
HDAC10-202ENST00000349505 BRINP3Q76B58 766 aa22.56■■□□□ 1.2
HDAC10-202ENST00000349505 LGR6Q9HBX8 967 aa22.56■■□□□ 1.2
HDAC10-202ENST00000349505 C1orf115Q9H7X2 142 aa22.55■■□□□ 1.2
HDAC10-202ENST00000349505 PLEKHG2Q9H7P9 1386 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms