RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 PIBF1Q8WXW3 757 aa12.62□□□□□ -0.39
CHRNA1-202ENST00000348749 GGNBP2Q9H3C7 697 aa12.62□□□□□ -0.39
CHRNA1-202ENST00000348749 YTHDC2Q9H6S0 1430 aaKnown RBP12.62□□□□□ -0.39
CHRNA1-202ENST00000348749 ARHGEF40Q8TER5 1519 aa12.62□□□□□ -0.39
CHRNA1-202ENST00000348749 SYCE3A1L190 88 aa12.61□□□□□ -0.39
CHRNA1-202ENST00000348749 TAF3Q5VWG9 929 aa12.61□□□□□ -0.39
CHRNA1-202ENST00000348749 IFT57Q9NWB7 429 aa12.61□□□□□ -0.39
CHRNA1-202ENST00000348749 PREX1Q8TCU6 1659 aa12.61□□□□□ -0.39
CHRNA1-202ENST00000348749 ABCC4O15439 1325 aa12.61□□□□□ -0.39
CHRNA1-202ENST00000348749 NPM1P06748 294 aaKnown RBP eCLIP12.61□□□□□ -0.39
CHRNA1-202ENST00000348749 GNAI1P63096 354 aa12.61□□□□□ -0.39
CHRNA1-202ENST00000348749 PTMAP06454 111 aaKnown RBP12.6□□□□□ -0.39
CHRNA1-202ENST00000348749 CBX1P83916 185 aa12.6□□□□□ -0.39
CHRNA1-202ENST00000348749 LMOD3Q0VAK6 560 aa12.6□□□□□ -0.39
CHRNA1-202ENST00000348749 PKP1Q13835 747 aa12.6□□□□□ -0.39
CHRNA1-202ENST00000348749 NFE2L2Q16236 605 aa12.6□□□□□ -0.39
CHRNA1-202ENST00000348749 ANKRD45Q5TZF3 282 aa12.6□□□□□ -0.39
CHRNA1-202ENST00000348749 MRPL50Q8N5N7 158 aaKnown RBP12.6□□□□□ -0.39
CHRNA1-202ENST00000348749 MYO5BQ9ULV0 1848 aa12.6□□□□□ -0.39
CHRNA1-202ENST00000348749 DNTTIP2Q5QJE6 756 aaKnown RBP12.6□□□□□ -0.39
CHRNA1-202ENST00000348749 TSPY26PQ9H489 355 aa12.6□□□□□ -0.39
CHRNA1-202ENST00000348749 ZDHHC9Q9Y397 364 aa12.6□□□□□ -0.39
CHRNA1-202ENST00000348749 KIF3AQ9Y496 699 aa12.6□□□□□ -0.39
CHRNA1-202ENST00000348749 ATP2B3Q16720 1220 aa12.59□□□□□ -0.39
CHRNA1-202ENST00000348749 UVSSAQ2YD98 709 aa12.59□□□□□ -0.39
CHRNA1-202ENST00000348749 API5Q9BZZ5 524 aaKnown RBP12.59□□□□□ -0.39
CHRNA1-202ENST00000348749 SPTLC3Q9NUV7 552 aa12.59□□□□□ -0.39
CHRNA1-202ENST00000348749 CDK12Q9NYV4 1490 aaPredicted RBP12.58□□□□□ -0.39
CHRNA1-202ENST00000348749 VAMP4O75379 141 aa12.58□□□□□ -0.4
CHRNA1-202ENST00000348749 ZNF853P0CG23 659 aa12.58□□□□□ -0.4
CHRNA1-202ENST00000348749 GTF2E1P29083 439 aaPredicted RBP12.58□□□□□ -0.4
CHRNA1-202ENST00000348749 HAP1P54257 671 aaPredicted RBP12.58□□□□□ -0.4
CHRNA1-202ENST00000348749 IDI1Q13907 227 aa12.58□□□□□ -0.4
CHRNA1-202ENST00000348749 NOLC1Q14978 699 aaKnown RBP eCLIP12.58□□□□□ -0.4
CHRNA1-202ENST00000348749 BBXQ8WY36 941 aaPredicted RBP12.58□□□□□ -0.4
CHRNA1-202ENST00000348749 ALKQ9UM73 1620 aa12.58□□□□□ -0.4
CHRNA1-202ENST00000348749 PDE4CQ08493 712 aa12.58□□□□□ -0.4
CHRNA1-202ENST00000348749 FKBP5Q13451 457 aaPredicted RBP12.58□□□□□ -0.4
CHRNA1-202ENST00000348749 USP26Q9BXU7 913 aa12.58□□□□□ -0.4
CHRNA1-202ENST00000348749 AATKQ6ZMQ8 1374 aa12.57□□□□□ -0.4
CHRNA1-202ENST00000348749 MAP2P11137 1827 aaKnown RBP12.57□□□□□ -0.4
CHRNA1-202ENST00000348749 SYAP1Q96A49 352 aaPredicted RBP12.57□□□□□ -0.4
CHRNA1-202ENST00000348749 RICTORQ6R327 1708 aa12.57□□□□□ -0.4
CHRNA1-202ENST00000348749 CPSF1Q10570 1443 aaKnown RBP12.56□□□□□ -0.4
CHRNA1-202ENST00000348749 ST18O60284 1047 aa12.56□□□□□ -0.4
CHRNA1-202ENST00000348749 PRKAR2BP31323 418 aa12.56□□□□□ -0.4
CHRNA1-202ENST00000348749 FAM184AQ8NB25 1140 aa12.56□□□□□ -0.4
CHRNA1-202ENST00000348749 NSFL1CQ9UNZ2 370 aaKnown RBP12.56□□□□□ -0.4
CHRNA1-202ENST00000348749 GSPT1P15170 499 aaKnown RBP12.56□□□□□ -0.4
CHRNA1-202ENST00000348749 FAM69CQ0P6D2 419 aa12.56□□□□□ -0.4
CHRNA1-202ENST00000348749 PRAM1Q96QH2 718 aa12.56□□□□□ -0.4
CHRNA1-202ENST00000348749 BCL2L12Q9HB09 334 aa12.56□□□□□ -0.4
CHRNA1-202ENST00000348749 PHF14O94880 888 aa12.55□□□□□ -0.4
CHRNA1-202ENST00000348749 PDCL2Q8N4E4 241 aa12.55□□□□□ -0.4
CHRNA1-202ENST00000348749 ZGPATQ8N5A5 531 aaKnown RBP12.55□□□□□ -0.4
CHRNA1-202ENST00000348749 RNF214Q8ND24 703 aa12.55□□□□□ -0.4
CHRNA1-202ENST00000348749 ANKRD7Q92527 254 aa12.55□□□□□ -0.4
CHRNA1-202ENST00000348749 JARID2Q92833 1246 aaPredicted RBP12.55□□□□□ -0.4
CHRNA1-202ENST00000348749 EDC4Q6P2E9 1401 aaKnown RBP12.55□□□□□ -0.4
CHRNA1-202ENST00000348749 TSC1Q92574 1164 aa12.54□□□□□ -0.4
CHRNA1-202ENST00000348749 CDK19Q9BWU1 502 aa12.54□□□□□ -0.4
CHRNA1-202ENST00000348749 POLKQ9UBT6 870 aa12.54□□□□□ -0.4
CHRNA1-202ENST00000348749 INTS3Q68E01 1043 aaKnown RBP12.54□□□□□ -0.4
CHRNA1-202ENST00000348749 FEZ1Q99689 392 aa12.54□□□□□ -0.4
CHRNA1-202ENST00000348749 MINK1Q8N4C8 1332 aaPredicted RBP12.54□□□□□ -0.4
CHRNA1-202ENST00000348749 DLG5Q8TDM6 1919 aa12.53□□□□□ -0.4
CHRNA1-202ENST00000348749 DCTPP1Q9H773 170 aa12.53□□□□□ -0.4
CHRNA1-202ENST00000348749 DIAPH3Q9NSV4 1193 aa12.53□□□□□ -0.4
CHRNA1-202ENST00000348749 TTC22Q5TAA0 569 aa12.52□□□□□ -0.4
CHRNA1-202ENST00000348749 PLEKHM2Q8IWE5 1019 aa12.52□□□□□ -0.4
CHRNA1-202ENST00000348749 SIRT2Q8IXJ6 389 aa12.52□□□□□ -0.4
CHRNA1-202ENST00000348749 TMEM51Q9NW97 253 aa12.52□□□□□ -0.4
CHRNA1-202ENST00000348749 STK26Q9P289 416 aa12.52□□□□□ -0.4
CHRNA1-202ENST00000348749 BRD1O95696 1058 aa12.52□□□□□ -0.41
CHRNA1-202ENST00000348749 SAFB2Q14151 953 aaKnown RBP eCLIP12.52□□□□□ -0.41
CHRNA1-202ENST00000348749 TWISTNBQ3B726 338 aaPredicted RBP12.52□□□□□ -0.41
CHRNA1-202ENST00000348749 KLHL34Q8N239 644 aa12.52□□□□□ -0.41
CHRNA1-202ENST00000348749 SETD1AO15047 1707 aaKnown RBP12.51□□□□□ -0.41
CHRNA1-202ENST00000348749 CTIFO43310 598 aaKnown RBP12.51□□□□□ -0.41
CHRNA1-202ENST00000348749 IL13P35225 146 aa12.51□□□□□ -0.41
CHRNA1-202ENST00000348749 RPAP2Q8IXW5 612 aaPredicted RBP12.51□□□□□ -0.41
CHRNA1-202ENST00000348749 CABP1Q9NZU7 370 aa12.51□□□□□ -0.41
CHRNA1-202ENST00000348749 RIMS2Q9UQ26 1411 aa12.51□□□□□ -0.41
CHRNA1-202ENST00000348749 NUTM2DQ5VT03 806 aaPredicted RBP12.5□□□□□ -0.41
CHRNA1-202ENST00000348749 CASC1Q6TDU7 716 aa12.5□□□□□ -0.41
CHRNA1-202ENST00000348749 MBIPQ9NS73 344 aa12.5□□□□□ -0.41
CHRNA1-202ENST00000348749 PPP6R1Q9UPN7 881 aa12.5□□□□□ -0.41
CHRNA1-202ENST00000348749 KNDC1Q76NI1 1749 aa12.5□□□□□ -0.41
CHRNA1-202ENST00000348749 MON2Q7Z3U7 1717 aa12.5□□□□□ -0.41
CHRNA1-202ENST00000348749 NRKQ7Z2Y5 1582 aa12.5□□□□□ -0.41
CHRNA1-202ENST00000348749 GABPB1Q06547 395 aaPredicted RBP12.5□□□□□ -0.41
CHRNA1-202ENST00000348749 SYCP1Q15431 976 aa12.5□□□□□ -0.41
CHRNA1-202ENST00000348749 OGFRQ9NZT2 677 aa12.5□□□□□ -0.41
CHRNA1-202ENST00000348749 MCM2P49736 904 aa12.49□□□□□ -0.41
CHRNA1-202ENST00000348749 CHAF1AQ13111 956 aaPredicted RBP12.49□□□□□ -0.41
CHRNA1-202ENST00000348749 ANKRD44Q8N8A2 993 aa12.49□□□□□ -0.41
CHRNA1-202ENST00000348749 DIP2BQ9P265 1576 aa12.49□□□□□ -0.41
CHRNA1-202ENST00000348749 KIAA0232Q92628 1395 aa12.49□□□□□ -0.41
CHRNA1-202ENST00000348749 SPDYE4A6NLX3 237 aa12.49□□□□□ -0.41
CHRNA1-202ENST00000348749 TPM3P06753 285 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms