RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 XPCQ01831 940 aaPredicted RBP25.83■■□□□ 1.73
CHRNA3-202ENST00000348639 CHMP4BQ9H444 224 aaKnown RBP25.83■■□□□ 1.73
CHRNA3-202ENST00000348639 RTF1Q92541 710 aaKnown RBP25.82■■□□□ 1.72
CHRNA3-202ENST00000348639 ABCC4O15439 1325 aa25.82■■□□□ 1.72
CHRNA3-202ENST00000348639 PLEKHG5O94827 1062 aa25.8■■□□□ 1.72
CHRNA3-202ENST00000348639 API5Q9BZZ5 524 aaKnown RBP25.8■■□□□ 1.72
CHRNA3-202ENST00000348639 ZBTB7CA1YPR0 619 aa25.8■■□□□ 1.72
CHRNA3-202ENST00000348639 ZBTB7BO15156 539 aaPredicted RBP25.8■■□□□ 1.72
CHRNA3-202ENST00000348639 HTATSF1O43719 755 aaKnown RBP25.8■■□□□ 1.72
CHRNA3-202ENST00000348639 NFAT5O94916 1531 aa25.78■■□□□ 1.72
CHRNA3-202ENST00000348639 LMOD2Q6P5Q4 547 aa25.78■■□□□ 1.72
CHRNA3-202ENST00000348639 SMC5Q8IY18 1101 aa25.78■■□□□ 1.72
CHRNA3-202ENST00000348639 DDRGK1Q96HY6 314 aa25.78■■□□□ 1.72
CHRNA3-202ENST00000348639 C19orf44Q9H6X5 657 aa25.78■■□□□ 1.72
CHRNA3-202ENST00000348639 VIRMAQ69YN4 1812 aaKnown RBP25.77■■□□□ 1.72
CHRNA3-202ENST00000348639 IP6K1Q92551 441 aa25.77■■□□□ 1.72
CHRNA3-202ENST00000348639 LTN1O94822 1766 aa25.77■■□□□ 1.72
CHRNA3-202ENST00000348639 KCNH5Q8NCM2 988 aa25.76■■□□□ 1.72
CHRNA3-202ENST00000348639 KRT24Q2M2I5 525 aa25.76■■□□□ 1.71
CHRNA3-202ENST00000348639 HSPA2P54652 639 aa25.75■■□□□ 1.71
CHRNA3-202ENST00000348639 USHBP1Q8N6Y0 703 aa25.73■■□□□ 1.71
CHRNA3-202ENST00000348639 GNAT3A8MTJ3 354 aa25.73■■□□□ 1.71
CHRNA3-202ENST00000348639 MIS18AQ9NYP9 233 aa25.73■■□□□ 1.71
CHRNA3-202ENST00000348639 TSPYL4Q9UJ04 414 aa25.73■■□□□ 1.71
CHRNA3-202ENST00000348639 C1orf167Q5SNV9 1468 aa25.72■■□□□ 1.71
CHRNA3-202ENST00000348639 KRT28Q7Z3Y7 464 aa25.71■■□□□ 1.71
CHRNA3-202ENST00000348639 ATF3P18847 181 aa25.71■■□□□ 1.71
CHRNA3-202ENST00000348639 TMEM94Q12767 1356 aa25.71■■□□□ 1.71
CHRNA3-202ENST00000348639 LRRC37A3O60309 1634 aa25.7■■□□□ 1.71
CHRNA3-202ENST00000348639 PHRF1Q9P1Y6 1649 aaKnown RBP25.7■■□□□ 1.71
CHRNA3-202ENST00000348639 GCP02774 474 aa25.7■■□□□ 1.7
CHRNA3-202ENST00000348639 LMTK3Q96Q04 1460 aa25.69■■□□□ 1.7
CHRNA3-202ENST00000348639 MAP3K5Q99683 1374 aa25.69■■□□□ 1.7
CHRNA3-202ENST00000348639 PTPRCP08575 1304 aa25.68■■□□□ 1.7
CHRNA3-202ENST00000348639 INTS3Q68E01 1043 aaKnown RBP25.68■■□□□ 1.7
CHRNA3-202ENST00000348639 NUCB1Q02818 461 aa25.67■■□□□ 1.7
CHRNA3-202ENST00000348639 SLIT3O75094 1523 aa25.67■■□□□ 1.7
CHRNA3-202ENST00000348639 RGS12O14924 1447 aa25.67■■□□□ 1.7
CHRNA3-202ENST00000348639 MSH6P52701 1360 aa25.67■■□□□ 1.7
CHRNA3-202ENST00000348639 NBPF6Q5VWK0 638 aa25.66■■□□□ 1.7
CHRNA3-202ENST00000348639 NBPF4Q96M43 638 aa25.66■■□□□ 1.7
CHRNA3-202ENST00000348639 STRCP1A6NGW2 1772 aa25.66■■□□□ 1.7
CHRNA3-202ENST00000348639 BABAM1Q9NWV8 329 aa25.65■■□□□ 1.7
CHRNA3-202ENST00000348639 KIF1AQ12756 1690 aa25.65■■□□□ 1.7
CHRNA3-202ENST00000348639 IL17REQ8NFR9 667 aa25.64■■□□□ 1.7
CHRNA3-202ENST00000348639 GCC1Q96CN9 775 aa25.64■■□□□ 1.7
CHRNA3-202ENST00000348639 USP19O94966 1318 aa25.64■■□□□ 1.7
CHRNA3-202ENST00000348639 ARHGEF25Q86VW2 580 aa25.64■■□□□ 1.69
CHRNA3-202ENST00000348639 C1orf115Q9H7X2 142 aa25.64■■□□□ 1.69
CHRNA3-202ENST00000348639 TRPM3Q9HCF6 1732 aaPredicted RBP25.64■■□□□ 1.69
CHRNA3-202ENST00000348639 SEC24BO95487 1268 aa25.63■■□□□ 1.69
CHRNA3-202ENST00000348639 SLC4A2P04920 1241 aa25.63■■□□□ 1.69
CHRNA3-202ENST00000348639 DDX17Q92841 729 aaKnown RBP25.62■■□□□ 1.69
CHRNA3-202ENST00000348639 LRRC59Q96AG4 307 aaKnown RBP25.62■■□□□ 1.69
CHRNA3-202ENST00000348639 MST1RQ04912 1400 aa25.62■■□□□ 1.69
CHRNA3-202ENST00000348639 TAF7Q15545 349 aaPredicted RBP25.61■■□□□ 1.69
CHRNA3-202ENST00000348639 CHD1LQ86WJ1 897 aa25.61■■□□□ 1.69
CHRNA3-202ENST00000348639 SIRT2Q8IXJ6 389 aa25.61■■□□□ 1.69
CHRNA3-202ENST00000348639 SOS1Q07889 1333 aaPredicted RBP25.6■■□□□ 1.69
CHRNA3-202ENST00000348639 NCOA3Q9Y6Q9 1424 aa25.59■■□□□ 1.69
CHRNA3-202ENST00000348639 DCCP43146 1447 aa25.58■■□□□ 1.68
CHRNA3-202ENST00000348639 CADPS2Q86UW7 1296 aa25.58■■□□□ 1.68
CHRNA3-202ENST00000348639 CEMIPQ8WUJ3 1361 aa25.57■■□□□ 1.68
CHRNA3-202ENST00000348639 LNPKQ9C0E8 428 aa25.57■■□□□ 1.68
CHRNA3-202ENST00000348639 RGPD2P0DJD1 1756 aa25.57■■□□□ 1.68
CHRNA3-202ENST00000348639 NCAPD2Q15021 1401 aa25.56■■□□□ 1.68
CHRNA3-202ENST00000348639 ANKRD24Q8TF21 1146 aa25.56■■□□□ 1.68
CHRNA3-202ENST00000348639 STK31Q9BXU1 1019 aa25.56■■□□□ 1.68
CHRNA3-202ENST00000348639 UPF2Q9HAU5 1272 aaKnown RBP25.56■■□□□ 1.68
CHRNA3-202ENST00000348639 ZC3H6P61129 1189 aaKnown RBP25.55■■□□□ 1.68
CHRNA3-202ENST00000348639 CCDC30Q5VVM6 783 aa25.55■■□□□ 1.68
CHRNA3-202ENST00000348639 AXIN2Q9Y2T1 843 aa25.54■■□□□ 1.68
CHRNA3-202ENST00000348639 ANKRD45Q5TZF3 282 aa25.54■■□□□ 1.68
CHRNA3-202ENST00000348639 G2E3Q7L622 706 aa25.54■■□□□ 1.68
CHRNA3-202ENST00000348639 DAXXQ9UER7 740 aaPredicted RBP25.54■■□□□ 1.68
CHRNA3-202ENST00000348639 PLEKHO1Q53GL0 409 aaPredicted RBP25.52■■□□□ 1.68
CHRNA3-202ENST00000348639 ALS2Q96Q42 1657 aa25.52■■□□□ 1.68
CHRNA3-202ENST00000348639 AMOTQ4VCS5 1084 aa25.51■■□□□ 1.67
CHRNA3-202ENST00000348639 RPAP2Q8IXW5 612 aaPredicted RBP25.51■■□□□ 1.67
CHRNA3-202ENST00000348639 ANKRD44Q8N8A2 993 aa25.51■■□□□ 1.67
CHRNA3-202ENST00000348639 STRCQ7RTU9 1775 aa25.51■■□□□ 1.67
CHRNA3-202ENST00000348639 MED1Q15648 1581 aaPredicted RBP25.51■■□□□ 1.67
CHRNA3-202ENST00000348639 ATP10DQ9P241 1426 aa25.51■■□□□ 1.67
CHRNA3-202ENST00000348639 CCT4P50991 539 aaKnown RBP25.51■■□□□ 1.67
CHRNA3-202ENST00000348639 AKAP4Q5JQC9 854 aa25.51■■□□□ 1.67
CHRNA3-202ENST00000348639 NPHP3Q7Z494 1330 aa25.5■■□□□ 1.67
CHRNA3-202ENST00000348639 TBC1D32Q96NH3 1257 aa25.5■■□□□ 1.67
CHRNA3-202ENST00000348639 DCTPP1Q9H773 170 aa25.49■■□□□ 1.67
CHRNA3-202ENST00000348639 FAM208AQ9UK61 1670 aaKnown RBP25.49■■□□□ 1.67
CHRNA3-202ENST00000348639 LMO7Q8WWI1 1683 aa25.49■■□□□ 1.67
CHRNA3-202ENST00000348639 ZNF530Q6P9A1 599 aaPredicted RBP25.49■■□□□ 1.67
CHRNA3-202ENST00000348639 LGR6Q9HBX8 967 aa25.49■■□□□ 1.67
CHRNA3-202ENST00000348639 CAMTA1Q9Y6Y1 1673 aa25.48■■□□□ 1.67
CHRNA3-202ENST00000348639 MEIS3Q99687 375 aa25.48■■□□□ 1.67
CHRNA3-202ENST00000348639 SLC4A3P48751 1232 aa25.47■■□□□ 1.67
CHRNA3-202ENST00000348639 FLIIQ13045 1269 aa25.47■■□□□ 1.67
CHRNA3-202ENST00000348639 CEP85Q6P2H3 762 aa25.47■■□□□ 1.67
CHRNA3-202ENST00000348639 NECTIN2Q92692 538 aa25.47■■□□□ 1.67
CHRNA3-202ENST00000348639 NBR1Q14596 966 aa25.47■■□□□ 1.67
CHRNA3-202ENST00000348639 CACNA1FO60840 1977 aa25.47■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms