RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 MEGF6O75095 1541 aa13.67□□□□□ -0.22
MRPL55-204ENST00000348259 TONSLQ96HA7 1378 aa13.67□□□□□ -0.22
MRPL55-204ENST00000348259 TOGARAM1Q9Y4F4 1720 aa13.67□□□□□ -0.22
MRPL55-204ENST00000348259 ZNF316A6NFI3 1004 aaPredicted RBP13.66□□□□□ -0.22
MRPL55-204ENST00000348259 PUS7Q96PZ0 661 aaKnown RBP13.65□□□□□ -0.22
MRPL55-204ENST00000348259 SLC12A5Q9H2X9 1139 aa13.65□□□□□ -0.22
MRPL55-204ENST00000348259 ADCY9O60503 1353 aa13.64□□□□□ -0.23
MRPL55-204ENST00000348259 YBX3P16989 372 aaKnown RBP eCLIP13.64□□□□□ -0.232e-6■□□□□ 10.7
MRPL55-204ENST00000348259 GPR162Q16538 588 aa13.64□□□□□ -0.23
MRPL55-204ENST00000348259 GIGYF1O75420 1035 aaPredicted RBP13.63□□□□□ -0.23
MRPL55-204ENST00000348259 KCNQ4P56696 695 aa13.63□□□□□ -0.23
MRPL55-204ENST00000348259 MAP2P11137 1827 aaKnown RBP13.62□□□□□ -0.23
MRPL55-204ENST00000348259 UBR3Q6ZT12 1888 aa13.62□□□□□ -0.23
MRPL55-204ENST00000348259 POLD1P28340 1107 aa13.62□□□□□ -0.23
MRPL55-204ENST00000348259 PRIM1P49642 420 aaKnown RBP13.62□□□□□ -0.23
MRPL55-204ENST00000348259 ITGB4P16144 1822 aa13.62□□□□□ -0.23
MRPL55-204ENST00000348259 MAP3K19Q56UN5 1328 aa13.62□□□□□ -0.23
MRPL55-204ENST00000348259 IFFO2Q5TF58 517 aa13.61□□□□□ -0.23
MRPL55-204ENST00000348259 HOXC9P31274 260 aa13.6□□□□□ -0.23
MRPL55-204ENST00000348259 PKD1L3Q7Z443 1732 aa13.6□□□□□ -0.23
MRPL55-204ENST00000348259 HDGFL2Q7Z4V5 671 aaPredicted RBP13.6□□□□□ -0.23
MRPL55-204ENST00000348259 COL23A1Q86Y22 540 aaPredicted RBP13.6□□□□□ -0.23
MRPL55-204ENST00000348259 DDX54Q8TDD1 881 aaKnown RBP13.6□□□□□ -0.23
MRPL55-204ENST00000348259 TFCP2L1Q9NZI6 479 aa13.6□□□□□ -0.23
MRPL55-204ENST00000348259 RTL1A6NKG5 1358 aa13.59□□□□□ -0.23
MRPL55-204ENST00000348259 ATP10DQ9P241 1426 aa13.59□□□□□ -0.23
MRPL55-204ENST00000348259 TESK2Q96S53 571 aa13.59□□□□□ -0.23
MRPL55-204ENST00000348259 CICQ96RK0 1608 aaPredicted RBP13.59□□□□□ -0.23
MRPL55-204ENST00000348259 C4BP0C0L5 1744 aa13.59□□□□□ -0.23
MRPL55-204ENST00000348259 TERF2IPQ9NYB0 399 aa13.58□□□□□ -0.24
MRPL55-204ENST00000348259 KIAA1551Q9HCM1 1747 aa13.58□□□□□ -0.24
MRPL55-204ENST00000348259 NCAPD2Q15021 1401 aa13.57□□□□□ -0.24
MRPL55-204ENST00000348259 GRIN3BO60391 1043 aa13.57□□□□□ -0.24
MRPL55-204ENST00000348259 FBLN1P23142 703 aa13.57□□□□□ -0.24
MRPL55-204ENST00000348259 ZCRB1Q8TBF4 217 aaKnown RBP13.57□□□□□ -0.24
MRPL55-204ENST00000348259 TMC1Q8TDI8 760 aa13.57□□□□□ -0.24
MRPL55-204ENST00000348259 CCNL1Q9UK58 526 aaPredicted RBP13.57□□□□□ -0.24
MRPL55-204ENST00000348259 ANKRD26Q9UPS8 1709 aa13.56□□□□□ -0.24
MRPL55-204ENST00000348259 KIF13BQ9NQT8 1826 aa13.56□□□□□ -0.24
MRPL55-204ENST00000348259 NBPF6Q5VWK0 638 aa13.56□□□□□ -0.24
MRPL55-204ENST00000348259 LTV1Q96GA3 475 aaPredicted RBP13.56□□□□□ -0.24
MRPL55-204ENST00000348259 NBPF4Q96M43 638 aa13.56□□□□□ -0.24
MRPL55-204ENST00000348259 CARD11Q9BXL7 1154 aa13.56□□□□□ -0.24
MRPL55-204ENST00000348259 CGNL1Q0VF96 1302 aa13.56□□□□□ -0.24
MRPL55-204ENST00000348259 KIF20BQ96Q89 1820 aa13.55□□□□□ -0.24
MRPL55-204ENST00000348259 AMIGO3Q86WK7 504 aa13.55□□□□□ -0.24
MRPL55-204ENST00000348259 KLHL34Q8N239 644 aa13.55□□□□□ -0.24
MRPL55-204ENST00000348259 CD2APQ9Y5K6 639 aa13.55□□□□□ -0.24
MRPL55-204ENST00000348259 USP47Q96K76 1375 aa13.55□□□□□ -0.24
MRPL55-204ENST00000348259 SYTL4Q96C24 671 aaPredicted RBP13.54□□□□□ -0.24
MRPL55-204ENST00000348259 PELP1Q8IZL8 1130 aaKnown RBP13.53□□□□□ -0.24
MRPL55-204ENST00000348259 MSL1Q68DK7 614 aa13.52□□□□□ -0.25
MRPL55-204ENST00000348259 COG3Q96JB2 828 aa13.52□□□□□ -0.25
MRPL55-204ENST00000348259 INSRP06213 1382 aa13.52□□□□□ -0.25
MRPL55-204ENST00000348259 PALLDQ8WX93 1383 aa13.52□□□□□ -0.25
MRPL55-204ENST00000348259 KIF24Q5T7B8 1368 aa13.51□□□□□ -0.25
MRPL55-204ENST00000348259 CYP27B1O15528 508 aa13.51□□□□□ -0.25
MRPL55-204ENST00000348259 BRCA1P38398 1863 aaKnown RBP13.5□□□□□ -0.25
MRPL55-204ENST00000348259 FYB1O15117 783 aa13.5□□□□□ -0.25
MRPL55-204ENST00000348259 AMPHP49418 695 aa13.5□□□□□ -0.25
MRPL55-204ENST00000348259 RRS1Q15050 365 aaKnown RBP13.5□□□□□ -0.25
MRPL55-204ENST00000348259 USHBP1Q8N6Y0 703 aa13.5□□□□□ -0.25
MRPL55-204ENST00000348259 ZNF831Q5JPB2 1677 aa13.5□□□□□ -0.25
MRPL55-204ENST00000348259 PCDH11XQ9BZA7 1347 aa13.49□□□□□ -0.25
MRPL55-204ENST00000348259 PCDH11YQ9BZA8 1340 aa13.49□□□□□ -0.25
MRPL55-204ENST00000348259 HSPA6P17066 643 aa13.49□□□□□ -0.25
MRPL55-204ENST00000348259 DIEXFQ68CQ4 756 aaKnown RBP13.49□□□□□ -0.25
MRPL55-204ENST00000348259 FLAD1Q8NFF5 587 aa13.49□□□□□ -0.25
MRPL55-204ENST00000348259 ST20-MTHFSA0A0A6YYL1 179 aa13.48□□□□□ -0.25
MRPL55-204ENST00000348259 NKX1-1Q15270 411 aaPredicted RBP13.48□□□□□ -0.25
MRPL55-204ENST00000348259 FLT4P35916 1363 aa13.47□□□□□ -0.25
MRPL55-204ENST00000348259 KIF3CO14782 793 aa13.47□□□□□ -0.25
MRPL55-204ENST00000348259 HSP90AB2PQ58FF8 381 aa13.47□□□□□ -0.25
MRPL55-204ENST00000348259 COL5A3P25940 1745 aaPredicted RBP13.47□□□□□ -0.25
MRPL55-204ENST00000348259 SMG6Q86US8 1419 aaKnown RBP13.47□□□□□ -0.25
MRPL55-204ENST00000348259 IGSF1Q8N6C5 1336 aa13.46□□□□□ -0.25
MRPL55-204ENST00000348259 TATP17735 454 aaPredicted RBP13.46□□□□□ -0.25
MRPL55-204ENST00000348259 RAPGEF4Q8WZA2 1011 aa13.46□□□□□ -0.25
MRPL55-204ENST00000348259 GPBP1L1Q9HC44 474 aaPredicted RBP13.46□□□□□ -0.25
MRPL55-204ENST00000348259 NSD3Q9BZ95 1437 aa13.46□□□□□ -0.26
MRPL55-204ENST00000348259 N4BP2Q86UW6 1770 aaPredicted RBP13.45□□□□□ -0.26
MRPL55-204ENST00000348259 PXDNLA1KZ92 1463 aa13.45□□□□□ -0.26
MRPL55-204ENST00000348259 MSH5O43196 834 aa13.45□□□□□ -0.26
MRPL55-204ENST00000348259 HMGB2P26583 209 aaKnown RBP13.45□□□□□ -0.26
MRPL55-204ENST00000348259 PIGBQ92521 554 aa13.45□□□□□ -0.26
MRPL55-204ENST00000348259 GGNBP2Q9H3C7 697 aa13.45□□□□□ -0.26
MRPL55-204ENST00000348259 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.44□□□□□ -0.26
MRPL55-204ENST00000348259 SSFA2P28290 1259 aa13.44□□□□□ -0.26
MRPL55-204ENST00000348259 MPRIPQ6WCQ1 1025 aa13.44□□□□□ -0.26
MRPL55-204ENST00000348259 SMIM5Q71RC9 77 aa13.44□□□□□ -0.26
MRPL55-204ENST00000348259 LINC00116Q8NCU8 138 aa13.44□□□□□ -0.26
MRPL55-204ENST00000348259 KDRP35968 1356 aa13.44□□□□□ -0.26
MRPL55-204ENST00000348259 ARFGEF1Q9Y6D6 1849 aa13.43□□□□□ -0.26
MRPL55-204ENST00000348259 SLC24A1O60721 1099 aa13.43□□□□□ -0.26
MRPL55-204ENST00000348259 C4AP0C0L4 1744 aa13.43□□□□□ -0.26
MRPL55-204ENST00000348259 SMARCC1Q92922 1105 aaPredicted RBP13.43□□□□□ -0.26
MRPL55-204ENST00000348259 C10orf71Q711Q0 1435 aa13.42□□□□□ -0.26
MRPL55-204ENST00000348259 ITPK1Q13572 414 aa13.42□□□□□ -0.26
MRPL55-204ENST00000348259 MYH14Q7Z406 1995 aaKnown RBP13.41□□□□□ -0.26
MRPL55-204ENST00000348259 PCNTO95613 3336 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms