RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 TNNQ9UQP3 1299 aa28.84■■■□□ 2.21
TNFRSF10B-202ENST00000347739 CRYBG1Q9Y4K1 1723 aa28.84■■■□□ 2.21
TNFRSF10B-202ENST00000347739 TSPYL6Q8N831 410 aa28.83■■■□□ 2.21
TNFRSF10B-202ENST00000347739 KIAA0232Q92628 1395 aa28.83■■■□□ 2.21
TNFRSF10B-202ENST00000347739 IPO8O15397 1037 aaKnown RBP28.83■■■□□ 2.21
TNFRSF10B-202ENST00000347739 TRIM27P14373 513 aa28.83■■■□□ 2.21
TNFRSF10B-202ENST00000347739 TWISTNBQ3B726 338 aaPredicted RBP28.83■■■□□ 2.21
TNFRSF10B-202ENST00000347739 NBPF6Q5VWK0 638 aa28.83■■■□□ 2.21
TNFRSF10B-202ENST00000347739 NBPF4Q96M43 638 aa28.83■■■□□ 2.21
TNFRSF10B-202ENST00000347739 MVPQ14764 893 aaKnown RBP28.82■■■□□ 2.2
TNFRSF10B-202ENST00000347739 NOB1Q9ULX3 412 aaKnown RBP28.82■■■□□ 2.2
TNFRSF10B-202ENST00000347739 ABCC6O95255 1503 aa28.82■■■□□ 2.2
TNFRSF10B-202ENST00000347739 FTSJ3Q8IY81 847 aaKnown RBP28.81■■■□□ 2.2
TNFRSF10B-202ENST00000347739 MAP3K5Q99683 1374 aa28.81■■■□□ 2.2
TNFRSF10B-202ENST00000347739 GNAT3A8MTJ3 354 aa28.8■■■□□ 2.2
TNFRSF10B-202ENST00000347739 HAP1P54257 671 aaPredicted RBP28.8■■■□□ 2.2
TNFRSF10B-202ENST00000347739 BRINP3Q76B58 766 aa28.8■■■□□ 2.2
TNFRSF10B-202ENST00000347739 C8orf58Q8NAV2 365 aa28.8■■■□□ 2.2
TNFRSF10B-202ENST00000347739 DDX17Q92841 729 aaKnown RBP28.8■■■□□ 2.2
TNFRSF10B-202ENST00000347739 SPATA31A3Q5VYP0 1347 aa28.8■■■□□ 2.2
TNFRSF10B-202ENST00000347739 ZBTB7CA1YPR0 619 aa28.8■■■□□ 2.2
TNFRSF10B-202ENST00000347739 USHBP1Q8N6Y0 703 aa28.79■■■□□ 2.2
TNFRSF10B-202ENST00000347739 MRPL50Q8N5N7 158 aaKnown RBP28.78■■■□□ 2.2
TNFRSF10B-202ENST00000347739 RBM19Q9Y4C8 960 aaKnown RBP28.78■■■□□ 2.2
TNFRSF10B-202ENST00000347739 LMO7Q8WWI1 1683 aa28.78■■■□□ 2.2
TNFRSF10B-202ENST00000347739 ARHGAP45Q92619 1136 aa28.77■■■□□ 2.2
TNFRSF10B-202ENST00000347739 RGPD5Q99666 1765 aa28.77■■■□□ 2.2
TNFRSF10B-202ENST00000347739 ANKRD24Q8TF21 1146 aa28.77■■■□□ 2.2
TNFRSF10B-202ENST00000347739 COL18A1P39060 1754 aa28.77■■■□□ 2.2
TNFRSF10B-202ENST00000347739 TCERG1O14776 1098 aaKnown RBP28.76■■■□□ 2.19
TNFRSF10B-202ENST00000347739 SLAIN2Q9P270 581 aa28.75■■■□□ 2.19
TNFRSF10B-202ENST00000347739 AXIN2Q9Y2T1 843 aa28.74■■■□□ 2.19
TNFRSF10B-202ENST00000347739 LRRC59Q96AG4 307 aaKnown RBP28.73■■■□□ 2.19
TNFRSF10B-202ENST00000347739 ELL2O00472 640 aaPredicted RBP28.72■■■□□ 2.19
TNFRSF10B-202ENST00000347739 BABAM1Q9NWV8 329 aa28.72■■■□□ 2.19
TNFRSF10B-202ENST00000347739 DDX19BQ9UMR2 479 aa28.72■■■□□ 2.19
TNFRSF10B-202ENST00000347739 ERBB3P21860 1342 aa28.72■■■□□ 2.19
TNFRSF10B-202ENST00000347739 FAM208AQ9UK61 1670 aaKnown RBP28.72■■■□□ 2.19
TNFRSF10B-202ENST00000347739 PLEKHG5O94827 1062 aa28.71■■■□□ 2.19
TNFRSF10B-202ENST00000347739 SOS2Q07890 1332 aaPredicted RBP28.71■■■□□ 2.19
TNFRSF10B-202ENST00000347739 CPDO75976 1380 aa28.7■■■□□ 2.19
TNFRSF10B-202ENST00000347739 ZC3H6P61129 1189 aaKnown RBP28.7■■■□□ 2.19
TNFRSF10B-202ENST00000347739 TSPYL4Q9UJ04 414 aa28.7■■■□□ 2.19
TNFRSF10B-202ENST00000347739 CEMIPQ8WUJ3 1361 aa28.7■■■□□ 2.18
TNFRSF10B-202ENST00000347739 AMOTQ4VCS5 1084 aa28.69■■■□□ 2.18
TNFRSF10B-202ENST00000347739 IL17REQ8NFR9 667 aa28.69■■■□□ 2.18
TNFRSF10B-202ENST00000347739 NHSL1Q5SYE7 1610 aa28.68■■■□□ 2.18
TNFRSF10B-202ENST00000347739 PLEKHO1Q53GL0 409 aaPredicted RBP28.67■■■□□ 2.18
TNFRSF10B-202ENST00000347739 TMEM57Q8N5G2 664 aa28.67■■■□□ 2.18
TNFRSF10B-202ENST00000347739 IGHDP01880 384 aa28.66■■■□□ 2.18
TNFRSF10B-202ENST00000347739 ITPRIPQ8IWB1 547 aa28.66■■■□□ 2.18
TNFRSF10B-202ENST00000347739 PCDHB15Q9Y5E8 787 aa28.66■■■□□ 2.18
TNFRSF10B-202ENST00000347739 KRT24Q2M2I5 525 aa28.65■■■□□ 2.18
TNFRSF10B-202ENST00000347739 OVOS2A0A0G2JMS6 1433 aa28.64■■■□□ 2.18
TNFRSF10B-202ENST00000347739 PLEKHG2Q9H7P9 1386 aa28.64■■■□□ 2.18
TNFRSF10B-202ENST00000347739 ABCC4O15439 1325 aa28.64■■■□□ 2.18
TNFRSF10B-202ENST00000347739 SOS1Q07889 1333 aaPredicted RBP28.64■■■□□ 2.18
TNFRSF10B-202ENST00000347739 AKAP4Q5JQC9 854 aa28.64■■■□□ 2.18
TNFRSF10B-202ENST00000347739 TAF7Q15545 349 aaPredicted RBP28.63■■■□□ 2.17
TNFRSF10B-202ENST00000347739 API5Q9BZZ5 524 aaKnown RBP28.63■■■□□ 2.17
TNFRSF10B-202ENST00000347739 MIS18AQ9NYP9 233 aa28.63■■■□□ 2.17
TNFRSF10B-202ENST00000347739 CABLES1Q8TDN4 633 aa28.63■■■□□ 2.17
TNFRSF10B-202ENST00000347739 ABCA3Q99758 1704 aa28.61■■■□□ 2.17
TNFRSF10B-202ENST00000347739 VIRMAQ69YN4 1812 aaKnown RBP28.61■■■□□ 2.17
TNFRSF10B-202ENST00000347739 ZNF530Q6P9A1 599 aaPredicted RBP28.6■■■□□ 2.17
TNFRSF10B-202ENST00000347739 CHMP4BQ9H444 224 aaKnown RBP28.6■■■□□ 2.17
TNFRSF10B-202ENST00000347739 ZBTB40Q9NUA8 1239 aa28.6■■■□□ 2.17
TNFRSF10B-202ENST00000347739 RWDD1Q9H446 243 aaPredicted RBP28.6■■■□□ 2.17
TNFRSF10B-202ENST00000347739 ADAMTS7Q9UKP4 1686 aa28.59■■■□□ 2.17
TNFRSF10B-202ENST00000347739 KDM3BQ7LBC6 1761 aa28.59■■■□□ 2.17
TNFRSF10B-202ENST00000347739 PTPRCP08575 1304 aa28.57■■■□□ 2.16
TNFRSF10B-202ENST00000347739 C1orf141Q5JVX7 400 aa28.55■■■□□ 2.16
TNFRSF10B-202ENST00000347739 RGS12O14924 1447 aa28.55■■■□□ 2.16
TNFRSF10B-202ENST00000347739 SKAP1Q86WV1 359 aa28.55■■■□□ 2.16
TNFRSF10B-202ENST00000347739 HDAC1Q13547 482 aaPredicted RBP28.54■■■□□ 2.16
TNFRSF10B-202ENST00000347739 LGR6Q9HBX8 967 aa28.54■■■□□ 2.16
TNFRSF10B-202ENST00000347739 CACNA1FO60840 1977 aa28.53■■■□□ 2.16
TNFRSF10B-202ENST00000347739 NLRP2Q9NX02 1062 aa28.53■■■□□ 2.16
TNFRSF10B-202ENST00000347739 ZBTB7BO15156 539 aaPredicted RBP28.52■■■□□ 2.16
TNFRSF10B-202ENST00000347739 CHRNA2Q15822 529 aa28.52■■■□□ 2.16
TNFRSF10B-202ENST00000347739 SIPA1L3O60292 1781 aaPredicted RBP28.52■■■□□ 2.16
TNFRSF10B-202ENST00000347739 RAPGEF4Q8WZA2 1011 aa28.52■■■□□ 2.16
TNFRSF10B-202ENST00000347739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.52■■■□□ 2.162e-8■□□□□ 10.4
TNFRSF10B-202ENST00000347739 RNMTO43148 476 aaKnown RBP28.51■■■□□ 2.15
TNFRSF10B-202ENST00000347739 PKD1L3Q7Z443 1732 aa28.5■■■□□ 2.15
TNFRSF10B-202ENST00000347739 INTS3Q68E01 1043 aaKnown RBP28.5■■■□□ 2.15
TNFRSF10B-202ENST00000347739 MEGF6O75095 1541 aa28.49■■■□□ 2.15
TNFRSF10B-202ENST00000347739 SLC4A2P04920 1241 aa28.49■■■□□ 2.15
TNFRSF10B-202ENST00000347739 CSB-PGBD3P0DP91 1061 aa28.49■■■□□ 2.15
TNFRSF10B-202ENST00000347739 TEFQ10587 303 aa28.49■■■□□ 2.15
TNFRSF10B-202ENST00000347739 CCDC30Q5VVM6 783 aa28.49■■■□□ 2.15
TNFRSF10B-202ENST00000347739 TATP17735 454 aaPredicted RBP28.48■■■□□ 2.15
TNFRSF10B-202ENST00000347739 PDE4AP27815 886 aa28.48■■■□□ 2.15
TNFRSF10B-202ENST00000347739 MPRIPQ6WCQ1 1025 aa28.48■■■□□ 2.15
TNFRSF10B-202ENST00000347739 BACH2Q9BYV9 841 aa28.48■■■□□ 2.15
TNFRSF10B-202ENST00000347739 LTBP4Q8N2S1 1624 aa28.47■■■□□ 2.15
TNFRSF10B-202ENST00000347739 HOXB7P09629 217 aa28.47■■■□□ 2.15
TNFRSF10B-202ENST00000347739 STK31Q9BXU1 1019 aa28.47■■■□□ 2.15
TNFRSF10B-202ENST00000347739 PRDM11Q9NQV5 511 aa28.46■■■□□ 2.15
TNFRSF10B-202ENST00000347739 SCN11AQ9UI33 1791 aa28.46■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms