RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 C8orf58Q8NAV2 365 aa12.41□□□□□ -0.42
TRAPPC6B-202ENST00000347691 COG3Q96JB2 828 aa12.41□□□□□ -0.42
TRAPPC6B-202ENST00000347691 PDCL3Q9H2J4 239 aa12.41□□□□□ -0.42
TRAPPC6B-202ENST00000347691 ELL2O00472 640 aaPredicted RBP12.4□□□□□ -0.42
TRAPPC6B-202ENST00000347691 CAVIN1Q6NZI2 390 aaKnown RBP12.4□□□□□ -0.42
TRAPPC6B-202ENST00000347691 KIAA1211Q6ZU35 1233 aa12.4□□□□□ -0.42
TRAPPC6B-202ENST00000347691 STAG3Q9UJ98 1225 aa12.4□□□□□ -0.42
TRAPPC6B-202ENST00000347691 ATP10DQ9P241 1426 aa12.4□□□□□ -0.42
TRAPPC6B-202ENST00000347691 ERC2O15083 957 aa12.4□□□□□ -0.42
TRAPPC6B-202ENST00000347691 CSPP1Q1MSJ5 1256 aa12.4□□□□□ -0.42
TRAPPC6B-202ENST00000347691 MAP7D2Q96T17 732 aa12.39□□□□□ -0.43
TRAPPC6B-202ENST00000347691 AK9Q5TCS8 1911 aa12.39□□□□□ -0.43
TRAPPC6B-202ENST00000347691 NOL7Q9UMY1 257 aaKnown RBP12.39□□□□□ -0.43
TRAPPC6B-202ENST00000347691 SDSP20132 328 aa12.39□□□□□ -0.43
TRAPPC6B-202ENST00000347691 CEP85Q6P2H3 762 aa12.39□□□□□ -0.43
TRAPPC6B-202ENST00000347691 PDLIM2Q96JY6 352 aa12.39□□□□□ -0.43
TRAPPC6B-202ENST00000347691 EMILIN1Q9Y6C2 1016 aa12.39□□□□□ -0.43
TRAPPC6B-202ENST00000347691 NRKQ7Z2Y5 1582 aa12.39□□□□□ -0.43
TRAPPC6B-202ENST00000347691 MON2Q7Z3U7 1717 aa12.38□□□□□ -0.43
TRAPPC6B-202ENST00000347691 ZNF500O60304 480 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC6B-202ENST00000347691 RAPGEF3O95398 923 aa12.38□□□□□ -0.43
TRAPPC6B-202ENST00000347691 MCCP23508 829 aa12.38□□□□□ -0.43
TRAPPC6B-202ENST00000347691 PKNOX2Q96KN3 472 aa12.38□□□□□ -0.43
TRAPPC6B-202ENST00000347691 OSBPL3Q9H4L5 887 aa12.38□□□□□ -0.43
TRAPPC6B-202ENST00000347691 PPP6R1Q9UPN7 881 aa12.38□□□□□ -0.43
TRAPPC6B-202ENST00000347691 SYAP1Q96A49 352 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC6B-202ENST00000347691 RTL1A6NKG5 1358 aa12.37□□□□□ -0.43
TRAPPC6B-202ENST00000347691 LRSAM1Q6UWE0 723 aa12.37□□□□□ -0.43
TRAPPC6B-202ENST00000347691 CCDC39Q9UFE4 941 aa12.37□□□□□ -0.43
TRAPPC6B-202ENST00000347691 RIMBP3CA6NJZ7 1639 aa12.37□□□□□ -0.43
TRAPPC6B-202ENST00000347691 RIMBP3BA6NNM3 1639 aa12.37□□□□□ -0.43
TRAPPC6B-202ENST00000347691 RIMBP3Q9UFD9 1639 aa12.37□□□□□ -0.43
TRAPPC6B-202ENST00000347691 WASLO00401 505 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC6B-202ENST00000347691 SETD1AO15047 1707 aaKnown RBP12.36□□□□□ -0.43
TRAPPC6B-202ENST00000347691 ITSN1Q15811 1721 aa12.36□□□□□ -0.43
TRAPPC6B-202ENST00000347691 PRPF40AO75400 957 aaKnown RBP12.36□□□□□ -0.43
TRAPPC6B-202ENST00000347691 RGS12O14924 1447 aa12.36□□□□□ -0.43
TRAPPC6B-202ENST00000347691 MTERF4Q7Z6M4 381 aaKnown RBP12.35□□□□□ -0.43
TRAPPC6B-202ENST00000347691 AKAP12Q02952 1782 aa12.35□□□□□ -0.43
TRAPPC6B-202ENST00000347691 CHL1O00533 1208 aa12.35□□□□□ -0.43
TRAPPC6B-202ENST00000347691 PHF14O94880 888 aa12.35□□□□□ -0.43
TRAPPC6B-202ENST00000347691 ANAPC15P60006 121 aa12.35□□□□□ -0.43
TRAPPC6B-202ENST00000347691 MSH6P52701 1360 aa12.35□□□□□ -0.43
TRAPPC6B-202ENST00000347691 CCT4P50991 539 aaKnown RBP12.35□□□□□ -0.43
TRAPPC6B-202ENST00000347691 SSH2Q76I76 1423 aa12.35□□□□□ -0.43
TRAPPC6B-202ENST00000347691 EPB41L2O43491 1005 aaKnown RBP12.34□□□□□ -0.43
TRAPPC6B-202ENST00000347691 NME9Q86XW9 330 aa12.34□□□□□ -0.43
TRAPPC6B-202ENST00000347691 SIRT1Q96EB6 747 aa12.34□□□□□ -0.43
TRAPPC6B-202ENST00000347691 INTS4Q96HW7 963 aaKnown RBP12.34□□□□□ -0.43
TRAPPC6B-202ENST00000347691 RBSNQ9H1K0 784 aa12.34□□□□□ -0.43
TRAPPC6B-202ENST00000347691 C3P01024 1663 aa12.34□□□□□ -0.43
TRAPPC6B-202ENST00000347691 C16orf71Q8IYS4 520 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC6B-202ENST00000347691 VSIG10Q8N0Z9 540 aa12.34□□□□□ -0.43
TRAPPC6B-202ENST00000347691 ZKSCAN5Q9Y2L8 839 aa12.34□□□□□ -0.43
TRAPPC6B-202ENST00000347691 PRIM1P49642 420 aaKnown RBP12.33□□□□□ -0.43
TRAPPC6B-202ENST00000347691 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.33□□□□□ -0.44
TRAPPC6B-202ENST00000347691 CCDC61Q9Y6R9 512 aa12.33□□□□□ -0.44
TRAPPC6B-202ENST00000347691 GPT2Q8TD30 523 aa12.33□□□□□ -0.44
TRAPPC6B-202ENST00000347691 A2ML1A8K2U0 1454 aa12.33□□□□□ -0.44
TRAPPC6B-202ENST00000347691 ARHGEF10O15013 1369 aa12.33□□□□□ -0.44
TRAPPC6B-202ENST00000347691 FBLN1P23142 703 aa12.32□□□□□ -0.44
TRAPPC6B-202ENST00000347691 KLHL34Q8N239 644 aa12.32□□□□□ -0.44
TRAPPC6B-202ENST00000347691 FAM83GA6ND36 823 aa12.32□□□□□ -0.44
TRAPPC6B-202ENST00000347691 PDE1AP54750 535 aa12.32□□□□□ -0.44
TRAPPC6B-202ENST00000347691 WAPLQ7Z5K2 1190 aa12.32□□□□□ -0.44
TRAPPC6B-202ENST00000347691 ZGPATQ8N5A5 531 aaKnown RBP12.32□□□□□ -0.44
TRAPPC6B-202ENST00000347691 CUL4AQ13619 759 aa12.32□□□□□ -0.44
TRAPPC6B-202ENST00000347691 NUDT16Q96DE0 195 aaKnown RBP12.32□□□□□ -0.44
TRAPPC6B-202ENST00000347691 SRCIN1Q9C0H9 1055 aa12.32□□□□□ -0.44
TRAPPC6B-202ENST00000347691 NEK4P51957 841 aa12.31□□□□□ -0.44
TRAPPC6B-202ENST00000347691 OTUD7AQ8TE49 926 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC6B-202ENST00000347691 ZDHHC9Q9Y397 364 aa12.31□□□□□ -0.44
TRAPPC6B-202ENST00000347691 SPATA31D1Q6ZQQ2 1576 aa12.31□□□□□ -0.44
TRAPPC6B-202ENST00000347691 BRD1O95696 1058 aa12.31□□□□□ -0.44
TRAPPC6B-202ENST00000347691 PKP1Q13835 747 aa12.31□□□□□ -0.44
TRAPPC6B-202ENST00000347691 TMX3Q96JJ7 454 aa12.31□□□□□ -0.44
TRAPPC6B-202ENST00000347691 MEIS3Q99687 375 aa12.31□□□□□ -0.44
TRAPPC6B-202ENST00000347691 SENP3Q9H4L4 574 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC6B-202ENST00000347691 FAM184AQ8NB25 1140 aa12.3□□□□□ -0.44
TRAPPC6B-202ENST00000347691 IL17RAQ96F46 866 aa12.3□□□□□ -0.44
TRAPPC6B-202ENST00000347691 TTC21BQ7Z4L5 1316 aa12.3□□□□□ -0.44
TRAPPC6B-202ENST00000347691 SMARCA5O60264 1052 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC6B-202ENST00000347691 GNAI2P04899 355 aa12.3□□□□□ -0.44
TRAPPC6B-202ENST00000347691 CPS1P31327 1500 aa12.3□□□□□ -0.44
TRAPPC6B-202ENST00000347691 DCTN1Q14203 1278 aa12.3□□□□□ -0.44
TRAPPC6B-202ENST00000347691 TSPY26PQ9H489 355 aa12.3□□□□□ -0.44
TRAPPC6B-202ENST00000347691 AGLP35573 1532 aa12.3□□□□□ -0.44
TRAPPC6B-202ENST00000347691 TECPR2O15040 1411 aa12.3□□□□□ -0.44
TRAPPC6B-202ENST00000347691 AOX1Q06278 1338 aa12.3□□□□□ -0.44
TRAPPC6B-202ENST00000347691 DYNC1I1O14576 645 aa12.3□□□□□ -0.44
TRAPPC6B-202ENST00000347691 HDGFP51858 240 aaKnown RBP12.3□□□□□ -0.44
TRAPPC6B-202ENST00000347691 RRS1Q15050 365 aaKnown RBP12.3□□□□□ -0.44
TRAPPC6B-202ENST00000347691 ESYT1Q9BSJ8 1104 aa12.3□□□□□ -0.44
TRAPPC6B-202ENST00000347691 TMEM63CQ9P1W3 806 aa12.3□□□□□ -0.44
TRAPPC6B-202ENST00000347691 R3HCC1Q9Y3T6 440 aaKnown RBP12.3□□□□□ -0.44
TRAPPC6B-202ENST00000347691 SYCE3A1L190 88 aa12.29□□□□□ -0.44
TRAPPC6B-202ENST00000347691 GNAI3P08754 354 aa12.29□□□□□ -0.44
TRAPPC6B-202ENST00000347691 SULT6B1Q6IMI4 303 aa12.29□□□□□ -0.44
TRAPPC6B-202ENST00000347691 SLC4A2P04920 1241 aa12.29□□□□□ -0.44
TRAPPC6B-202ENST00000347691 UVSSAQ2YD98 709 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms