RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 MAP3K4Q9Y6R4 1608 aa18.54■□□□□ 0.56
LMNA-201ENST00000347559 KDM4AO75164 1064 aa18.54■□□□□ 0.56
LMNA-201ENST00000347559 SRPK2P78362 688 aaKnown RBP18.54■□□□□ 0.56
LMNA-201ENST00000347559 CCDC183Q5T5S1 534 aa18.53■□□□□ 0.56
LMNA-201ENST00000347559 KIAA1524Q8TCG1 905 aa18.53■□□□□ 0.56
LMNA-201ENST00000347559 ZNF428Q96B54 188 aa18.53■□□□□ 0.56
LMNA-201ENST00000347559 API5Q9BZZ5 524 aaKnown RBP18.53■□□□□ 0.56
LMNA-201ENST00000347559 PALD1Q9ULE6 856 aa18.53■□□□□ 0.56
LMNA-201ENST00000347559 CNPY2Q9Y2B0 182 aa18.53■□□□□ 0.56
LMNA-201ENST00000347559 ANKRD36BQ8N2N9 1353 aa18.53■□□□□ 0.56
LMNA-201ENST00000347559 GIMAP6Q6P9H5 292 aa18.52■□□□□ 0.56
LMNA-201ENST00000347559 CDK11BP21127 795 aaKnown RBP18.52■□□□□ 0.56
LMNA-201ENST00000347559 ANKRD7Q92527 254 aa18.52■□□□□ 0.56
LMNA-201ENST00000347559 KCNF1Q9H3M0 494 aa18.52■□□□□ 0.56
LMNA-201ENST00000347559 NAP1L2Q9ULW6 460 aaPredicted RBP18.52■□□□□ 0.56
LMNA-201ENST00000347559 BRPF1P55201 1214 aaPredicted RBP18.52■□□□□ 0.55
LMNA-201ENST00000347559 C8orf58Q8NAV2 365 aa18.52■□□□□ 0.55
LMNA-201ENST00000347559 PHACTR3Q96KR7 559 aa18.52■□□□□ 0.55
LMNA-201ENST00000347559 ANO2Q9NQ90 1003 aa18.52■□□□□ 0.55
LMNA-201ENST00000347559 MBIPQ9NS73 344 aa18.52■□□□□ 0.55
LMNA-201ENST00000347559 KIAA1210Q9ULL0 1709 aa18.51■□□□□ 0.55
LMNA-201ENST00000347559 FIBPO43427 364 aa18.5■□□□□ 0.55
LMNA-201ENST00000347559 NSD2O96028 1365 aa18.5■□□□□ 0.55
LMNA-201ENST00000347559 NAA30Q147X3 362 aaPredicted RBP18.5■□□□□ 0.55
LMNA-201ENST00000347559 PTCH1Q13635 1447 aa18.5■□□□□ 0.55
LMNA-201ENST00000347559 AP5Z1O43299 807 aa18.49■□□□□ 0.55
LMNA-201ENST00000347559 DTNBO60941 627 aa18.49■□□□□ 0.55
LMNA-201ENST00000347559 MX1P20591 662 aa18.49■□□□□ 0.55
LMNA-201ENST00000347559 MCM2P49736 904 aa18.49■□□□□ 0.55
LMNA-201ENST00000347559 C16orf45Q96MC5 204 aaPredicted RBP18.49■□□□□ 0.55
LMNA-201ENST00000347559 OGFRQ9NZT2 677 aa18.49■□□□□ 0.55
LMNA-201ENST00000347559 STK26Q9P289 416 aa18.49■□□□□ 0.55
LMNA-201ENST00000347559 PIK3R4Q99570 1358 aa18.49■□□□□ 0.55
LMNA-201ENST00000347559 MCCP23508 829 aa18.49■□□□□ 0.55
LMNA-201ENST00000347559 CUL4AQ13619 759 aa18.49■□□□□ 0.55
LMNA-201ENST00000347559 ANKRD44Q8N8A2 993 aa18.49■□□□□ 0.55
LMNA-201ENST00000347559 SRCIN1Q9C0H9 1055 aa18.49■□□□□ 0.55
LMNA-201ENST00000347559 WDR33Q9C0J8 1336 aaKnown RBP18.48■□□□□ 0.55
LMNA-201ENST00000347559 FYB1O15117 783 aa18.48■□□□□ 0.55
LMNA-201ENST00000347559 GNAI1P63096 354 aa18.48■□□□□ 0.55
LMNA-201ENST00000347559 KRT24Q2M2I5 525 aa18.48■□□□□ 0.55
LMNA-201ENST00000347559 LARP6Q9BRS8 491 aaKnown RBP18.48■□□□□ 0.55
LMNA-201ENST00000347559 MYOM2P54296 1465 aa18.48■□□□□ 0.55
LMNA-201ENST00000347559 NCBP1Q09161 790 aaKnown RBP18.48■□□□□ 0.55
LMNA-201ENST00000347559 FEZ1Q99689 392 aa18.48■□□□□ 0.55
LMNA-201ENST00000347559 C14orf93Q9H972 538 aaKnown RBP18.48■□□□□ 0.55
LMNA-201ENST00000347559 FCHSD2O94868 740 aa18.47■□□□□ 0.55
LMNA-201ENST00000347559 RILPL2Q969X0 211 aa18.47■□□□□ 0.55
LMNA-201ENST00000347559 TAF3Q5VWG9 929 aa18.47■□□□□ 0.55
LMNA-201ENST00000347559 CEP85Q6P2H3 762 aa18.47■□□□□ 0.55
LMNA-201ENST00000347559 A0A1W2PP64 1363 aa18.47■□□□□ 0.55
LMNA-201ENST00000347559 PTGS1P23219 599 aa18.47■□□□□ 0.55
LMNA-201ENST00000347559 KCNJ4P48050 445 aa18.47■□□□□ 0.55
LMNA-201ENST00000347559 PPRC1Q5VV67 1664 aaKnown RBP18.46■□□□□ 0.55
LMNA-201ENST00000347559 TRIM6-TRIM34B2RNG4 842 aa18.46■□□□□ 0.55
LMNA-201ENST00000347559 IFT57Q9NWB7 429 aa18.46■□□□□ 0.55
LMNA-201ENST00000347559 CHMP3Q9Y3E7 222 aa18.46■□□□□ 0.55
LMNA-201ENST00000347559 CTIFO43310 598 aaKnown RBP18.45■□□□□ 0.54
LMNA-201ENST00000347559 DRC7Q8IY82 874 aa18.45■□□□□ 0.54
LMNA-201ENST00000347559 GOLGA6L6A8MZA4 724 aa18.45■□□□□ 0.54
LMNA-201ENST00000347559 NFE2L2Q16236 605 aa18.45■□□□□ 0.54
LMNA-201ENST00000347559 PLCD3Q8N3E9 789 aa18.45■□□□□ 0.54
LMNA-201ENST00000347559 INTS4Q96HW7 963 aaKnown RBP18.45■□□□□ 0.54
LMNA-201ENST00000347559 DCTN1Q14203 1278 aa18.45■□□□□ 0.54
LMNA-201ENST00000347559 FAM83GA6ND36 823 aa18.44■□□□□ 0.54
LMNA-201ENST00000347559 ZNF592Q92610 1267 aa18.44■□□□□ 0.54
LMNA-201ENST00000347559 MEIS3Q99687 375 aa18.44■□□□□ 0.54
LMNA-201ENST00000347559 REREQ9P2R6 1566 aa18.44■□□□□ 0.54
LMNA-201ENST00000347559 PDE1AP54750 535 aa18.44■□□□□ 0.54
LMNA-201ENST00000347559 RPAP2Q8IXW5 612 aaPredicted RBP18.44■□□□□ 0.54
LMNA-201ENST00000347559 ESYT1Q9BSJ8 1104 aa18.44■□□□□ 0.54
LMNA-201ENST00000347559 QRICH2Q9H0J4 1663 aa18.44■□□□□ 0.54
LMNA-201ENST00000347559 CTNNA3Q9UI47 895 aa18.43■□□□□ 0.54
LMNA-201ENST00000347559 ERICH4A6NGS2 130 aa18.43■□□□□ 0.54
LMNA-201ENST00000347559 LRMPQ12912 555 aa18.43■□□□□ 0.54
LMNA-201ENST00000347559 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.43■□□□□ 0.54
LMNA-201ENST00000347559 TCHHQ07283 1943 aa18.42■□□□□ 0.54
LMNA-201ENST00000347559 UBE2HP62256 183 aa18.42■□□□□ 0.54
LMNA-201ENST00000347559 EXOC6BQ9Y2D4 811 aa18.42■□□□□ 0.54
LMNA-201ENST00000347559 COL3A1P02461 1466 aaPredicted RBP18.41■□□□□ 0.54
LMNA-201ENST00000347559 TNNT1P13805 278 aa18.41■□□□□ 0.54
LMNA-201ENST00000347559 MYO3AQ8NEV4 1616 aa18.41■□□□□ 0.54
LMNA-201ENST00000347559 TPM3P06753 285 aa18.4■□□□□ 0.54
LMNA-201ENST00000347559 CCDC186Q7Z3E2 898 aa18.4■□□□□ 0.54
LMNA-201ENST00000347559 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.4■□□□□ 0.545e-9■□□□□ 8
LMNA-201ENST00000347559 SLFN14P0C7P3 912 aa18.4■□□□□ 0.54
LMNA-201ENST00000347559 GABPB1Q06547 395 aaPredicted RBP18.4■□□□□ 0.54
LMNA-201ENST00000347559 TERF2IPQ9NYB0 399 aa18.4■□□□□ 0.54
LMNA-201ENST00000347559 PLCH2O75038 1416 aa18.4■□□□□ 0.54
LMNA-201ENST00000347559 MINK1Q8N4C8 1332 aaPredicted RBP18.4■□□□□ 0.54
LMNA-201ENST00000347559 SLC4A10Q6U841 1118 aa18.4■□□□□ 0.54
LMNA-201ENST00000347559 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.4■□□□□ 0.545e-9■■□□□ 12.4
LMNA-201ENST00000347559 V9GYY5 206 aaPredicted RBP18.4■□□□□ 0.54
LMNA-201ENST00000347559 ZSCAN22P10073 491 aaPredicted RBP18.39■□□□□ 0.53
LMNA-201ENST00000347559 CCDC112Q8NEF3 446 aa18.39■□□□□ 0.53
LMNA-201ENST00000347559 USP32Q8NFA0 1604 aa18.39■□□□□ 0.53
LMNA-201ENST00000347559 DDX41Q9UJV9 622 aaKnown RBP18.38■□□□□ 0.53
LMNA-201ENST00000347559 ATP10DQ9P241 1426 aa18.38■□□□□ 0.53
LMNA-201ENST00000347559 TET3O43151 1660 aa18.38■□□□□ 0.53
LMNA-201ENST00000347559 IRX5P78411 483 aaPredicted RBP18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms