RNA–Protein interactions for RNA: ENST00000346495.6

TSPAN3-202, Transcript of tetraspanin 3, humanhuman

TSL 2 BASIC

Gene TSPAN3, Length 1,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-202ENST00000346495 HAP1P54257 671 aaPredicted RBP27.7■■■□□ 2.02
TSPAN3-202ENST00000346495 CRB1P82279 1406 aa27.69■■■□□ 2.02
TSPAN3-202ENST00000346495 CHRNA2Q15822 529 aa27.69■■■□□ 2.02
TSPAN3-202ENST00000346495 LRRC37A3O60309 1634 aa27.68■■■□□ 2.02
TSPAN3-202ENST00000346495 PELP1Q8IZL8 1130 aaKnown RBP27.68■■■□□ 2.02
TSPAN3-202ENST00000346495 ZNF428Q96B54 188 aa27.68■■■□□ 2.02
TSPAN3-202ENST00000346495 CRBNQ96SW2 442 aa27.68■■■□□ 2.02
TSPAN3-202ENST00000346495 PLEKHO1Q53GL0 409 aaPredicted RBP27.67■■■□□ 2.02
TSPAN3-202ENST00000346495 C20orf194Q5TEA3 1177 aa27.67■■■□□ 2.02
TSPAN3-202ENST00000346495 CHL1O00533 1208 aa27.67■■■□□ 2.02
TSPAN3-202ENST00000346495 CANXP27824 592 aaKnown RBP27.67■■■□□ 2.02
TSPAN3-202ENST00000346495 AMOTQ4VCS5 1084 aa27.67■■■□□ 2.02
TSPAN3-202ENST00000346495 PRDM11Q9NQV5 511 aa27.66■■■□□ 2.02
TSPAN3-202ENST00000346495 PDE3AQ14432 1141 aa27.65■■■□□ 2.02
TSPAN3-202ENST00000346495 B4GALNT3Q6L9W6 998 aa27.65■■■□□ 2.02
TSPAN3-202ENST00000346495 CSB-PGBD3P0DP91 1061 aa27.64■■■□□ 2.02
TSPAN3-202ENST00000346495 ALDH1L2Q3SY69 923 aa27.63■■■□□ 2.01
TSPAN3-202ENST00000346495 NLRP2Q9NX02 1062 aa27.63■■■□□ 2.01
TSPAN3-202ENST00000346495 CCDC136Q96JN2 1154 aa27.63■■■□□ 2.01
TSPAN3-202ENST00000346495 BCL2L13Q9BXK5 485 aa27.63■■■□□ 2.01
TSPAN3-202ENST00000346495 SMC4Q9NTJ3 1288 aa27.63■■■□□ 2.01
TSPAN3-202ENST00000346495 FRAT1Q92837 279 aaPredicted RBP27.62■■■□□ 2.01
TSPAN3-202ENST00000346495 COL22A1Q8NFW1 1626 aaPredicted RBP27.61■■■□□ 2.01
TSPAN3-202ENST00000346495 SSH1Q8WYL5 1049 aa27.61■■■□□ 2.01
TSPAN3-202ENST00000346495 PLEKHG2Q9H7P9 1386 aa27.6■■■□□ 2.01
TSPAN3-202ENST00000346495 VAMP4O75379 141 aa27.6■■■□□ 2.01
TSPAN3-202ENST00000346495 AKAP4Q5JQC9 854 aa27.6■■■□□ 2.01
TSPAN3-202ENST00000346495 TOM1O60784 492 aa27.59■■■□□ 2.01
TSPAN3-202ENST00000346495 ZNF530Q6P9A1 599 aaPredicted RBP27.59■■■□□ 2.01
TSPAN3-202ENST00000346495 TWISTNBQ3B726 338 aaPredicted RBP27.59■■■□□ 2.01
TSPAN3-202ENST00000346495 IL17REQ8NFR9 667 aa27.59■■■□□ 2.01
TSPAN3-202ENST00000346495 RAPGEF4Q8WZA2 1011 aa27.59■■■□□ 2.01
TSPAN3-202ENST00000346495 PHLPP1O60346 1717 aa27.58■■■□□ 2.01
TSPAN3-202ENST00000346495 ZKSCAN2Q63HK3 967 aa27.57■■■□□ 2
TSPAN3-202ENST00000346495 TSPYL6Q8N831 410 aa27.57■■■□□ 2
TSPAN3-202ENST00000346495 C8orf58Q8NAV2 365 aa27.57■■■□□ 2
TSPAN3-202ENST00000346495 BABAM1Q9NWV8 329 aa27.57■■■□□ 2
TSPAN3-202ENST00000346495 TATP17735 454 aaPredicted RBP27.56■■■□□ 2
TSPAN3-202ENST00000346495 C1orf141Q5JVX7 400 aa27.56■■■□□ 2
TSPAN3-202ENST00000346495 TSPYL4Q9UJ04 414 aa27.56■■■□□ 2
TSPAN3-202ENST00000346495 CEMIPQ8WUJ3 1361 aa27.56■■■□□ 2
TSPAN3-202ENST00000346495 KIF16BQ96L93 1317 aa27.56■■■□□ 2
TSPAN3-202ENST00000346495 COL5A2P05997 1499 aaPredicted RBP27.56■■■□□ 2
TSPAN3-202ENST00000346495 MS4A1P11836 297 aa27.56■■■□□ 2
TSPAN3-202ENST00000346495 BRPF1P55201 1214 aaPredicted RBP27.56■■■□□ 2
TSPAN3-202ENST00000346495 WDR17Q8IZU2 1322 aa27.55■■■□□ 2
TSPAN3-202ENST00000346495 AEBP2Q6ZN18 517 aaPredicted RBP27.55■■■□□ 2
TSPAN3-202ENST00000346495 VIRMAQ69YN4 1812 aaKnown RBP27.54■■■□□ 2
TSPAN3-202ENST00000346495 COL16A1Q07092 1604 aaPredicted RBP27.54■■■□□ 2
TSPAN3-202ENST00000346495 OVOS2A0A0G2JMS6 1433 aa27.53■■■□□ 2
TSPAN3-202ENST00000346495 TAF7Q15545 349 aaPredicted RBP27.53■■■□□ 2
TSPAN3-202ENST00000346495 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.53■■■□□ 2
TSPAN3-202ENST00000346495 ELL2O00472 640 aaPredicted RBP27.52■■■□□ 2
TSPAN3-202ENST00000346495 IPO8O15397 1037 aaKnown RBP27.52■■■□□ 2
TSPAN3-202ENST00000346495 MEGF6O75095 1541 aa27.51■■□□□ 1.99
TSPAN3-202ENST00000346495 PANK1Q8TE04 598 aa27.51■■□□□ 1.99
TSPAN3-202ENST00000346495 MIS18AQ9NYP9 233 aa27.51■■□□□ 1.99
TSPAN3-202ENST00000346495 SPG7Q9UQ90 795 aa27.51■■□□□ 1.99
TSPAN3-202ENST00000346495 COL14A1Q05707 1796 aaKnown RBP27.5■■□□□ 1.99
TSPAN3-202ENST00000346495 NOB1Q9ULX3 412 aaKnown RBP27.5■■□□□ 1.99
TSPAN3-202ENST00000346495 PKD1L3Q7Z443 1732 aa27.5■■□□□ 1.99
TSPAN3-202ENST00000346495 MRPL50Q8N5N7 158 aaKnown RBP27.49■■□□□ 1.99
TSPAN3-202ENST00000346495 PARP4Q9UKK3 1724 aaKnown RBP27.49■■□□□ 1.99
TSPAN3-202ENST00000346495 ADAMTS7Q9UKP4 1686 aa27.49■■□□□ 1.99
TSPAN3-202ENST00000346495 ATF7IPQ6VMQ6 1270 aa27.49■■□□□ 1.99
TSPAN3-202ENST00000346495 TOM1L2Q6ZVM7 507 aa27.49■■□□□ 1.99
TSPAN3-202ENST00000346495 LGR6Q9HBX8 967 aa27.49■■□□□ 1.99
TSPAN3-202ENST00000346495 RNMTO43148 476 aaKnown RBP27.48■■□□□ 1.99
TSPAN3-202ENST00000346495 DZIP1LQ8IYY4 767 aaKnown RBP27.48■■□□□ 1.99
TSPAN3-202ENST00000346495 EVA1CP58658 441 aa27.47■■□□□ 1.99
TSPAN3-202ENST00000346495 PIP4K2BP78356 416 aa27.47■■□□□ 1.99
TSPAN3-202ENST00000346495 FTSJ3Q8IY81 847 aaKnown RBP27.47■■□□□ 1.99
TSPAN3-202ENST00000346495 COG6Q9Y2V7 657 aa27.47■■□□□ 1.99
TSPAN3-202ENST00000346495 AAMPQ13685 434 aa27.46■■□□□ 1.99
TSPAN3-202ENST00000346495 CARD10Q9BWT7 1032 aa27.46■■□□□ 1.99
TSPAN3-202ENST00000346495 TNNQ9UQP3 1299 aa27.46■■□□□ 1.99
TSPAN3-202ENST00000346495 RLBP1P12271 317 aa27.45■■□□□ 1.99
TSPAN3-202ENST00000346495 TRIM27P14373 513 aa27.45■■□□□ 1.99
TSPAN3-202ENST00000346495 TEFQ10587 303 aa27.45■■□□□ 1.99
TSPAN3-202ENST00000346495 KRT24Q2M2I5 525 aa27.45■■□□□ 1.99
TSPAN3-202ENST00000346495 MPRIPQ6WCQ1 1025 aa27.45■■□□□ 1.99
TSPAN3-202ENST00000346495 KDM3BQ7LBC6 1761 aa27.45■■□□□ 1.99
TSPAN3-202ENST00000346495 SOS1Q07889 1333 aaPredicted RBP27.45■■□□□ 1.99
TSPAN3-202ENST00000346495 ARHGAP45Q92619 1136 aa27.45■■□□□ 1.98
TSPAN3-202ENST00000346495 CLUAP1Q96AJ1 413 aa27.45■■□□□ 1.98
TSPAN3-202ENST00000346495 UBAP1LF5GYI3 381 aa27.44■■□□□ 1.98
TSPAN3-202ENST00000346495 SCN11AQ9UI33 1791 aa27.43■■□□□ 1.98
TSPAN3-202ENST00000346495 STRN4Q9NRL3 753 aa27.43■■□□□ 1.98
TSPAN3-202ENST00000346495 SIPA1L3O60292 1781 aaPredicted RBP27.42■■□□□ 1.98
TSPAN3-202ENST00000346495 PHKG2P15735 406 aa27.41■■□□□ 1.98
TSPAN3-202ENST00000346495 MVPQ14764 893 aaKnown RBP27.41■■□□□ 1.98
TSPAN3-202ENST00000346495 IFNL2Q8IZJ0 200 aa27.41■■□□□ 1.98
TSPAN3-202ENST00000346495 LARP1Q6PKG0 1096 aaKnown RBP27.4■■□□□ 1.98
TSPAN3-202ENST00000346495 BTG4Q9NY30 223 aa27.4■■□□□ 1.98
TSPAN3-202ENST00000346495 TCERG1O14776 1098 aaKnown RBP27.39■■□□□ 1.98
TSPAN3-202ENST00000346495 BTBD11A6QL63 1104 aa27.38■■□□□ 1.97
TSPAN3-202ENST00000346495 HSP90AB1P08238 724 aaKnown RBP27.38■■□□□ 1.97
TSPAN3-202ENST00000346495 IL2RBP14784 551 aa27.37■■□□□ 1.97
TSPAN3-202ENST00000346495 API5Q9BZZ5 524 aaKnown RBP27.37■■□□□ 1.97
TSPAN3-202ENST00000346495 KDM6AO15550 1401 aaPredicted RBP27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms