RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 AEBP2Q6ZN18 517 aaPredicted RBP14.22□□□□□ -0.13
COL12A1-202ENST00000345356 OGFRQ9NZT2 677 aa14.22□□□□□ -0.13
COL12A1-202ENST00000345356 FAM177BA6PVY3 158 aa14.21□□□□□ -0.13
COL12A1-202ENST00000345356 SCAND2PQ9GZW5 306 aaPredicted RBP14.21□□□□□ -0.13
COL12A1-202ENST00000345356 KIF5CO60282 957 aa14.21□□□□□ -0.13
COL12A1-202ENST00000345356 XBP1P17861 261 aa14.21□□□□□ -0.13
COL12A1-202ENST00000345356 CWC27Q6UX04 472 aaKnown RBP14.21□□□□□ -0.13
COL12A1-202ENST00000345356 TAX1BP1Q86VP1 789 aa14.21□□□□□ -0.13
COL12A1-202ENST00000345356 TMX1Q9H3N1 280 aa14.21□□□□□ -0.13
COL12A1-202ENST00000345356 VGLL3A8MV65 326 aa14.21□□□□□ -0.14
COL12A1-202ENST00000345356 GSDMDP57764 484 aa14.21□□□□□ -0.14
COL12A1-202ENST00000345356 STAC3Q96MF2 364 aa14.21□□□□□ -0.14
COL12A1-202ENST00000345356 SCAPERQ9BY12 1400 aa14.21□□□□□ -0.14
COL12A1-202ENST00000345356 TBC1D9Q6ZT07 1266 aa14.2□□□□□ -0.14
COL12A1-202ENST00000345356 FEZ1Q99689 392 aa14.2□□□□□ -0.14
COL12A1-202ENST00000345356 FYCO1Q9BQS8 1478 aa14.2□□□□□ -0.14
COL12A1-202ENST00000345356 SLC4A2P04920 1241 aa14.2□□□□□ -0.14
COL12A1-202ENST00000345356 CABP2Q9NPB3 220 aa14.2□□□□□ -0.14
COL12A1-202ENST00000345356 CCDC171Q6TFL3 1326 aa14.2□□□□□ -0.14
COL12A1-202ENST00000345356 MICALCLQ6ZW33 695 aa14.2□□□□□ -0.14
COL12A1-202ENST00000345356 RBM33Q96EV2 1170 aaKnown RBP14.2□□□□□ -0.14
COL12A1-202ENST00000345356 RPAP2Q8IXW5 612 aaPredicted RBP14.19□□□□□ -0.14
COL12A1-202ENST00000345356 ERBINQ96RT1 1412 aa14.19□□□□□ -0.14
COL12A1-202ENST00000345356 TOP1P11387 765 aaKnown RBP14.19□□□□□ -0.14
COL12A1-202ENST00000345356 CCDC30Q5VVM6 783 aa14.19□□□□□ -0.14
COL12A1-202ENST00000345356 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.19□□□□□ -0.14
COL12A1-202ENST00000345356 V9GYY5 206 aaPredicted RBP14.19□□□□□ -0.14
COL12A1-202ENST00000345356 IVLP07476 585 aa14.19□□□□□ -0.14
COL12A1-202ENST00000345356 CCT4P50991 539 aaKnown RBP14.19□□□□□ -0.14
COL12A1-202ENST00000345356 RSPH14Q9UHP6 348 aa14.18□□□□□ -0.14
COL12A1-202ENST00000345356 CASKIN1Q8WXD9 1431 aa14.18□□□□□ -0.14
COL12A1-202ENST00000345356 GIMAP6Q6P9H5 292 aa14.18□□□□□ -0.14
COL12A1-202ENST00000345356 STK11IPQ8N1F8 1099 aa14.18□□□□□ -0.14
COL12A1-202ENST00000345356 MCM3P25205 808 aa14.18□□□□□ -0.14
COL12A1-202ENST00000345356 ZNF165P49910 485 aa14.18□□□□□ -0.14
COL12A1-202ENST00000345356 BMP2KLQ5H9B9 411 aa14.18□□□□□ -0.14
COL12A1-202ENST00000345356 NOL7Q9UMY1 257 aaKnown RBP14.18□□□□□ -0.14
COL12A1-202ENST00000345356 NCOA1Q15788 1441 aa14.18□□□□□ -0.14
COL12A1-202ENST00000345356 POTEB2H3BUK9 544 aa14.18□□□□□ -0.14
COL12A1-202ENST00000345356 UBE2HP62256 183 aa14.18□□□□□ -0.14
COL12A1-202ENST00000345356 ENOX2Q16206 610 aaKnown RBP14.18□□□□□ -0.14
COL12A1-202ENST00000345356 ZNF397Q8NF99 534 aaPredicted RBP14.18□□□□□ -0.14
COL12A1-202ENST00000345356 DDX19AQ9NUU7 478 aaKnown RBP14.18□□□□□ -0.14
COL12A1-202ENST00000345356 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.18□□□□□ -0.14
COL12A1-202ENST00000345356 IGF1RP08069 1367 aa14.18□□□□□ -0.14
COL12A1-202ENST00000345356 CCDC186Q7Z3E2 898 aa14.18□□□□□ -0.14
COL12A1-202ENST00000345356 KIAA1328Q86T90 577 aa14.18□□□□□ -0.14
COL12A1-202ENST00000345356 KIAA1107Q9UPP5 1409 aa14.17□□□□□ -0.14
COL12A1-202ENST00000345356 TMC6Q7Z403 805 aa14.17□□□□□ -0.14
COL12A1-202ENST00000345356 SMARCA5O60264 1052 aaPredicted RBP14.17□□□□□ -0.14
COL12A1-202ENST00000345356 ERC1Q8IUD2 1116 aa14.17□□□□□ -0.14
COL12A1-202ENST00000345356 C10orf67Q8IYJ2 551 aa14.17□□□□□ -0.14
COL12A1-202ENST00000345356 RAB3GAP1Q15042 981 aa14.17□□□□□ -0.14
COL12A1-202ENST00000345356 SSH1Q8WYL5 1049 aa14.17□□□□□ -0.14
COL12A1-202ENST00000345356 RASSF4Q9H2L5 321 aa14.17□□□□□ -0.14
COL12A1-202ENST00000345356 IL1RAPL2Q9NP60 686 aa14.17□□□□□ -0.14
COL12A1-202ENST00000345356 LUC7LQ9NQ29 371 aaKnown RBP14.17□□□□□ -0.14
COL12A1-202ENST00000345356 TXLNAP40222 546 aa14.16□□□□□ -0.14
COL12A1-202ENST00000345356 AIMP1Q12904 312 aaKnown RBP14.16□□□□□ -0.14
COL12A1-202ENST00000345356 TTC31Q49AM3 519 aaPredicted RBP14.16□□□□□ -0.14
COL12A1-202ENST00000345356 CTR9Q6PD62 1173 aa14.16□□□□□ -0.14
COL12A1-202ENST00000345356 CFTRP13569 1480 aa14.16□□□□□ -0.14
COL12A1-202ENST00000345356 RIC3Q7Z5B4 369 aa14.15□□□□□ -0.14
COL12A1-202ENST00000345356 FBXO3Q9UK99 471 aa14.15□□□□□ -0.14
COL12A1-202ENST00000345356 CTAGE5O15320 804 aa14.15□□□□□ -0.14
COL12A1-202ENST00000345356 NF2P35240 595 aa14.15□□□□□ -0.14
COL12A1-202ENST00000345356 TERF1P54274 439 aa14.15□□□□□ -0.14
COL12A1-202ENST00000345356 SNX21Q969T3 373 aa14.15□□□□□ -0.14
COL12A1-202ENST00000345356 ARFGAP3Q9NP61 516 aa14.15□□□□□ -0.14
COL12A1-202ENST00000345356 RAI14Q9P0K7 980 aa14.15□□□□□ -0.14
COL12A1-202ENST00000345356 ZSWIM4Q9H7M6 989 aa14.15□□□□□ -0.14
COL12A1-202ENST00000345356 STX6O43752 255 aa14.15□□□□□ -0.14
COL12A1-202ENST00000345356 SLU7O95391 586 aaKnown RBP14.15□□□□□ -0.14
COL12A1-202ENST00000345356 TTC5Q8N0Z6 440 aa14.15□□□□□ -0.14
COL12A1-202ENST00000345356 NEFHP12036 1026 aa14.14□□□□□ -0.15
COL12A1-202ENST00000345356 SKILP12757 684 aa14.14□□□□□ -0.15
COL12A1-202ENST00000345356 CFAP70Q5T0N1 1121 aa14.14□□□□□ -0.15
COL12A1-202ENST00000345356 ZNF428Q96B54 188 aa14.14□□□□□ -0.15
COL12A1-202ENST00000345356 SLC12A5Q9H2X9 1139 aa14.14□□□□□ -0.15
COL12A1-202ENST00000345356 EXOC6BQ9Y2D4 811 aa14.14□□□□□ -0.15
COL12A1-202ENST00000345356 LIMCH1Q9UPQ0 1083 aa14.14□□□□□ -0.15
COL12A1-202ENST00000345356 DHX29Q7Z478 1369 aaKnown RBP14.14□□□□□ -0.15
COL12A1-202ENST00000345356 STX1AQ16623 288 aa14.14□□□□□ -0.15
COL12A1-202ENST00000345356 SH2B1Q9NRF2 756 aaPredicted RBP14.14□□□□□ -0.15
COL12A1-202ENST00000345356 MX1P20591 662 aa14.13□□□□□ -0.15
COL12A1-202ENST00000345356 U2AF2P26368 475 aaKnown RBP eCLIP14.13□□□□□ -0.15
COL12A1-202ENST00000345356 SART3Q15020 963 aaKnown RBP14.13□□□□□ -0.15
COL12A1-202ENST00000345356 ZFYVE27Q5T4F4 411 aa14.13□□□□□ -0.15
COL12A1-202ENST00000345356 CAPN2P17655 700 aa14.13□□□□□ -0.15
COL12A1-202ENST00000345356 GNG11P61952 73 aa14.13□□□□□ -0.15
COL12A1-202ENST00000345356 STIM1Q13586 685 aa14.13□□□□□ -0.15
COL12A1-202ENST00000345356 TMEM132EQ6IEE7 984 aa14.13□□□□□ -0.15
COL12A1-202ENST00000345356 MICALL1Q8N3F8 863 aa14.13□□□□□ -0.15
COL12A1-202ENST00000345356 PRPF40BQ6NWY9 871 aaKnown RBP14.13□□□□□ -0.15
COL12A1-202ENST00000345356 SMC5Q8IY18 1101 aa14.13□□□□□ -0.15
COL12A1-202ENST00000345356 LARP6Q9BRS8 491 aaKnown RBP14.13□□□□□ -0.15
COL12A1-202ENST00000345356 CCDC150Q8NCX0 1101 aa14.12□□□□□ -0.15
COL12A1-202ENST00000345356 SEC24BO95487 1268 aa14.12□□□□□ -0.15
COL12A1-202ENST00000345356 NUTM1Q86Y26 1132 aa14.12□□□□□ -0.15
COL12A1-202ENST00000345356 TFIP11Q9UBB9 837 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms