RNA–Protein interactions for RNA: ENST00000345008.6

LYPD1-201, Transcript of LY6/PLAUR domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LYPD1, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYPD1-201ENST00000345008 SHANK3Q9BYB0 1731 aa27.13■■□□□ 1.93
LYPD1-201ENST00000345008 USHBP1Q8N6Y0 703 aa27.13■■□□□ 1.93
LYPD1-201ENST00000345008 CASZ1Q86V15 1759 aa27.12■■□□□ 1.93
LYPD1-201ENST00000345008 RAPGEF4Q8WZA2 1011 aa27.12■■□□□ 1.93
LYPD1-201ENST00000345008 DOT1LQ8TEK3 1739 aa27.1■■□□□ 1.93
LYPD1-201ENST00000345008 PPP1R1BQ9UD71 204 aaPredicted RBP27.1■■□□□ 1.93
LYPD1-201ENST00000345008 EMILIN1Q9Y6C2 1016 aa27.1■■□□□ 1.93
LYPD1-201ENST00000345008 MAP2P11137 1827 aaKnown RBP27.1■■□□□ 1.93
LYPD1-201ENST00000345008 SLC15A2Q16348 729 aa27.09■■□□□ 1.93
LYPD1-201ENST00000345008 ANKRD26Q9UPS8 1709 aa27.08■■□□□ 1.93
LYPD1-201ENST00000345008 PPM1GO15355 546 aaPredicted RBP27.08■■□□□ 1.93
LYPD1-201ENST00000345008 TATP17735 454 aaPredicted RBP27.08■■□□□ 1.93
LYPD1-201ENST00000345008 SYTL4Q96C24 671 aaPredicted RBP27.08■■□□□ 1.93
LYPD1-201ENST00000345008 PRIM1P49642 420 aaKnown RBP27.05■■□□□ 1.92
LYPD1-201ENST00000345008 PDGFDQ9GZP0 370 aaPredicted RBP27.05■■□□□ 1.92
LYPD1-201ENST00000345008 PAPPAQ13219 1627 aa27.05■■□□□ 1.92
LYPD1-201ENST00000345008 ZBTB7AO95365 584 aa27.02■■□□□ 1.92
LYPD1-201ENST00000345008 WASHC2AQ641Q2 1341 aa27.01■■□□□ 1.91
LYPD1-201ENST00000345008 PCDH11XQ9BZA7 1347 aa27.01■■□□□ 1.91
LYPD1-201ENST00000345008 PCDH11YQ9BZA8 1340 aa27.01■■□□□ 1.91
LYPD1-201ENST00000345008 SLC27A3Q5K4L6 730 aa27■■□□□ 1.91
LYPD1-201ENST00000345008 PANK3Q9H999 370 aa27■■□□□ 1.91
LYPD1-201ENST00000345008 LRRC4BQ9NT99 713 aa27■■□□□ 1.91
LYPD1-201ENST00000345008 NSD2O96028 1365 aa26.98■■□□□ 1.91
LYPD1-201ENST00000345008 TNNT2P45379 298 aaPredicted RBP26.98■■□□□ 1.91
LYPD1-201ENST00000345008 POLKQ9UBT6 870 aa26.98■■□□□ 1.91
LYPD1-201ENST00000345008 LY75O60449 1722 aa26.97■■□□□ 1.91
LYPD1-201ENST00000345008 ATF5Q9Y2D1 282 aaPredicted RBP26.97■■□□□ 1.91
LYPD1-201ENST00000345008 PKD1L3Q7Z443 1732 aa26.96■■□□□ 1.91
LYPD1-201ENST00000345008 NCAPD2Q15021 1401 aa26.96■■□□□ 1.91
LYPD1-201ENST00000345008 ZNF827Q17R98 1081 aa26.95■■□□□ 1.9
LYPD1-201ENST00000345008 MTFR1LQ9H019 292 aa26.95■■□□□ 1.9
LYPD1-201ENST00000345008 CYP27B1O15528 508 aa26.92■■□□□ 1.9
LYPD1-201ENST00000345008 PTGER2P43116 358 aa26.92■■□□□ 1.9
LYPD1-201ENST00000345008 AKT1S1Q96B36 256 aa26.92■■□□□ 1.9
LYPD1-201ENST00000345008 EYA1Q99502 592 aa26.92■■□□□ 1.9
LYPD1-201ENST00000345008 QSER1Q2KHR3 1735 aa26.92■■□□□ 1.9
LYPD1-201ENST00000345008 KCNQ4P56696 695 aa26.91■■□□□ 1.9
LYPD1-201ENST00000345008 SPG7Q9UQ90 795 aa26.91■■□□□ 1.9
LYPD1-201ENST00000345008 CCNL1Q9UK58 526 aaPredicted RBP26.9■■□□□ 1.9
LYPD1-201ENST00000345008 ITGB4P16144 1822 aa26.89■■□□□ 1.9
LYPD1-201ENST00000345008 EIF4A2Q14240 407 aaKnown RBP26.89■■□□□ 1.9
LYPD1-201ENST00000345008 TUBGCP6Q96RT7 1819 aa26.88■■□□□ 1.89
LYPD1-201ENST00000345008 DCAF8L1A6NGE4 600 aa26.88■■□□□ 1.89
LYPD1-201ENST00000345008 TFCP2L1Q9NZI6 479 aa26.88■■□□□ 1.89
LYPD1-201ENST00000345008 KNSTRNQ9Y448 316 aa26.88■■□□□ 1.89
LYPD1-201ENST00000345008 TOGARAM1Q9Y4F4 1720 aa26.87■■□□□ 1.89
LYPD1-201ENST00000345008 MPRIPQ6WCQ1 1025 aa26.87■■□□□ 1.89
LYPD1-201ENST00000345008 MORC1Q86VD1 984 aa26.87■■□□□ 1.89
LYPD1-201ENST00000345008 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.85■■□□□ 1.89
LYPD1-201ENST00000345008 SLC16A10Q8TF71 515 aa26.84■■□□□ 1.89
LYPD1-201ENST00000345008 SGIP1Q9BQI5 828 aa26.84■■□□□ 1.89
LYPD1-201ENST00000345008 PNPLA7Q6ZV29 1317 aa26.84■■□□□ 1.89
LYPD1-201ENST00000345008 KIF7Q2M1P5 1343 aa26.83■■□□□ 1.89
LYPD1-201ENST00000345008 PALLDQ8WX93 1383 aa26.83■■□□□ 1.88
LYPD1-201ENST00000345008 NKX1-1Q15270 411 aaPredicted RBP26.82■■□□□ 1.88
LYPD1-201ENST00000345008 C5P01031 1676 aa26.82■■□□□ 1.88
LYPD1-201ENST00000345008 SMARCC1Q92922 1105 aaPredicted RBP26.81■■□□□ 1.88
LYPD1-201ENST00000345008 ARXQ96QS3 562 aa26.81■■□□□ 1.88
LYPD1-201ENST00000345008 IGSF1Q8N6C5 1336 aa26.81■■□□□ 1.88
LYPD1-201ENST00000345008 HMGB2P26583 209 aaKnown RBP26.8■■□□□ 1.88
LYPD1-201ENST00000345008 IFNL2Q8IZJ0 200 aa26.8■■□□□ 1.88
LYPD1-201ENST00000345008 FHDC1Q9C0D6 1143 aaPredicted RBP26.8■■□□□ 1.88
LYPD1-201ENST00000345008 TAF1LQ8IZX4 1826 aa26.8■■□□□ 1.88
LYPD1-201ENST00000345008 PLEKHG2Q9H7P9 1386 aa26.8■■□□□ 1.88
LYPD1-201ENST00000345008 PHKG2P15735 406 aa26.78■■□□□ 1.88
LYPD1-201ENST00000345008 PIGBQ92521 554 aa26.77■■□□□ 1.88
LYPD1-201ENST00000345008 SYT17Q9BSW7 474 aa26.77■■□□□ 1.88
LYPD1-201ENST00000345008 POLD1P28340 1107 aa26.76■■□□□ 1.87
LYPD1-201ENST00000345008 TMOD3Q9NYL9 352 aa26.76■■□□□ 1.87
LYPD1-201ENST00000345008 MSH5O43196 834 aa26.75■■□□□ 1.87
LYPD1-201ENST00000345008 AMER1Q5JTC6 1135 aaPredicted RBP26.75■■□□□ 1.87
LYPD1-201ENST00000345008 COL24A1Q17RW2 1714 aa26.75■■□□□ 1.87
LYPD1-201ENST00000345008 PLEKHO1Q53GL0 409 aaPredicted RBP26.72■■□□□ 1.87
LYPD1-201ENST00000345008 MAP3K5Q99683 1374 aa26.71■■□□□ 1.87
LYPD1-201ENST00000345008 C4BP0C0L5 1744 aa26.71■■□□□ 1.87
LYPD1-201ENST00000345008 YY1P25490 414 aa26.71■■□□□ 1.87
LYPD1-201ENST00000345008 COL23A1Q86Y22 540 aaPredicted RBP26.71■■□□□ 1.87
LYPD1-201ENST00000345008 HSP90AB1P08238 724 aaKnown RBP26.69■■□□□ 1.86
LYPD1-201ENST00000345008 AMOTQ4VCS5 1084 aa26.69■■□□□ 1.86
LYPD1-201ENST00000345008 FLAD1Q8NFF5 587 aa26.69■■□□□ 1.86
LYPD1-201ENST00000345008 AK7Q96M32 723 aa26.69■■□□□ 1.86
LYPD1-201ENST00000345008 ZNF530Q6P9A1 599 aaPredicted RBP26.68■■□□□ 1.86
LYPD1-201ENST00000345008 KLHL34Q8N239 644 aa26.68■■□□□ 1.86
LYPD1-201ENST00000345008 LOC102724428A0A0B4J2F2 783 aa26.67■■□□□ 1.86
LYPD1-201ENST00000345008 SIK1P57059 783 aa26.67■■□□□ 1.86
LYPD1-201ENST00000345008 AEBP1Q8IUX7 1158 aa26.67■■□□□ 1.86
LYPD1-201ENST00000345008 ASAP1Q9ULH1 1129 aa26.67■■□□□ 1.86
LYPD1-201ENST00000345008 SULT6B1Q6IMI4 303 aa26.66■■□□□ 1.86
LYPD1-201ENST00000345008 DCAF5Q96JK2 942 aa26.66■■□□□ 1.86
LYPD1-201ENST00000345008 UBR3Q6ZT12 1888 aa26.66■■□□□ 1.86
LYPD1-201ENST00000345008 ERVV-2B6SEH9 535 aa26.65■■□□□ 1.86
LYPD1-201ENST00000345008 PER1O15534 1290 aaPredicted RBP26.65■■□□□ 1.86
LYPD1-201ENST00000345008 IL13P35225 146 aa26.65■■□□□ 1.86
LYPD1-201ENST00000345008 C1orf141Q5JVX7 400 aa26.64■■□□□ 1.86
LYPD1-201ENST00000345008 CC2D1BQ5T0F9 858 aaKnown RBP26.64■■□□□ 1.86
LYPD1-201ENST00000345008 KDRP35968 1356 aa26.63■■□□□ 1.85
LYPD1-201ENST00000345008 MTHFSP49914 203 aa26.63■■□□□ 1.85
LYPD1-201ENST00000345008 MSL1Q68DK7 614 aa26.63■■□□□ 1.85
LYPD1-201ENST00000345008 UTRNP46939 3433 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms